| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yxeK [H]
Identifier: 158313852
GI number: 158313852
Start: 2423015
End: 2424382
Strand: Direct
Name: yxeK [H]
Synonym: Franean1_2017
Alternate gene names: 158313852
Gene position: 2423015-2424382 (Clockwise)
Preceding gene: 158313851
Following gene: 158313857
Centisome position: 26.98
GC content: 71.71
Gene sequence:
>1368_bases ATGAGCAGCCCGACCAGGCAGATCCACCTCGCCGCGCACTTCCCGGGCGTGAACAACACGACCGTGTGGAGCGACCCGCG CTCGGGCAGCCACATCGCGTTCGAGTCGTTCGTCCATTTCGCCCGGACGGCGGAACGGGCGAAGTTCGACTTCCTGTTCC TGGCGGAGGGGCTGCGGCTGAGGGAGCAACGCGGGCGCATCCATGACCTGGACGTCGTCGGGCGTCCAGACACGTTCACC GTGCTCGCGGCGCTGGCGGCGGTGACCGACCGGTTGGGCCTGGCCGGGACCATCAACTCGACGTTCAACGAGCCGTACGA GGTGGCCCGCCAGTTCGCCAGTCTCGACCATCTCTCCGACGGGCGCGCCGCGTGGAACGTCGTCACCTCCTGGGACGCGT TCACCGGGGAGAACTTCCGCCGCGGTGGCTTCCTGGCCGAGGAGCAGCGCTACGAGCGCGCCGAGCTGTTCCTGCGGACG GCCAGCGAGCTGTTCGACTCCTGGCGGGGGGACGAGATCGTCGCGGACAAGGAGTCCGGCGTCTTCCTGGCCGATGCCAA GGCGGGGGCGTTCGAGCACCACGACGCCCACTTCGACATCAGCGGGCAGTTCACGGTGCCGCGCAGCCCGCAGGGCCGGC CGGTGATCTTCCAGGCCGGTGACTCCGACGCGGGCCGGGAGTTCGCCGCCCGGTCCGCCGACGCGATCTTCAGCCGGCAC AGCACGTTCGACGCCGGGCAGGCGTTCCACGCGGACGTCAAGCGCCGCCTCGCCCGCTACGGCCGTGCGCCCGAGGATCT CCTCGTCCTGCCGGCGGCGACGTTCGTCCTCGGCGACACCGACGCGCAGGCGCGGGAGCGGGCCGAGGAGGTCCGCCGCC AGCAGGTCAGCGGCGCCACCGCGATCCAGTTCCTCGAGCAGGTGTGGAACCGCGACCTCGGTGACCACGATCCGGACGGG CCGCTGCCCGAGGTCGACCCCGTACCCGGGGAGAACACCGTCGCCCAGGGCAGGGCGAGCGTGCGGATGTACGAGGACCG GCTGGCCACCGCCCGCCGCTGGCGCGAGATCGCCGAGGCGGGGAAGCTCACCACCCGCGAGCTGGTCATTGAGGTCAGCG GGCGGCAGGCGTTCGTCGGCAGCCCGGCGACCGTCGCGGACACGATCAACCGGTTCGTACAGGCCCGCGCGGCGGACGGG TTCATCCTCGTCCCGCACATAACCCCCGCCGGCCTGGACGAGTTCGCGGACACGGTCGTCCCGCTGCTCCAGGAGCGCGG CGTGTTCCGGGCCGACTACACGGGGACGACGCTGCGCGACCATCTCGGCCTCGCCCCGGTGCCAGGATGGCCGGTTCACG CGGTCTGA
Upstream 100 bases:
>100_bases CGCGGCCTGCTCGGGTTCCCCCGGGCGGCCAACCGCTACGCCGCCGCCCCACCCGAACCCGCCGCCACCTGACGCGTCCG TCCCGACCGGGAGGAACCGG
Downstream 100 bases:
>100_bases GGCCTTCCTCACGGCGTGTACATCGGCTCGTTCGCGATTCGCGGGCTCGGCCCGGTCTCCTGACTGCTGATCTCGGAGAT CTACCTGACCCGGCTGGACC
Product: putative FMNH2-utilizing oxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MSSPTRQIHLAAHFPGVNNTTVWSDPRSGSHIAFESFVHFARTAERAKFDFLFLAEGLRLREQRGRIHDLDVVGRPDTFT VLAALAAVTDRLGLAGTINSTFNEPYEVARQFASLDHLSDGRAAWNVVTSWDAFTGENFRRGGFLAEEQRYERAELFLRT ASELFDSWRGDEIVADKESGVFLADAKAGAFEHHDAHFDISGQFTVPRSPQGRPVIFQAGDSDAGREFAARSADAIFSRH STFDAGQAFHADVKRRLARYGRAPEDLLVLPAATFVLGDTDAQARERAEEVRRQQVSGATAIQFLEQVWNRDLGDHDPDG PLPEVDPVPGENTVAQGRASVRMYEDRLATARRWREIAEAGKLTTRELVIEVSGRQAFVGSPATVADTINRFVQARAADG FILVPHITPAGLDEFADTVVPLLQERGVFRADYTGTTLRDHLGLAPVPGWPVHAV
Sequences:
>Translated_455_residues MSSPTRQIHLAAHFPGVNNTTVWSDPRSGSHIAFESFVHFARTAERAKFDFLFLAEGLRLREQRGRIHDLDVVGRPDTFT VLAALAAVTDRLGLAGTINSTFNEPYEVARQFASLDHLSDGRAAWNVVTSWDAFTGENFRRGGFLAEEQRYERAELFLRT ASELFDSWRGDEIVADKESGVFLADAKAGAFEHHDAHFDISGQFTVPRSPQGRPVIFQAGDSDAGREFAARSADAIFSRH STFDAGQAFHADVKRRLARYGRAPEDLLVLPAATFVLGDTDAQARERAEEVRRQQVSGATAIQFLEQVWNRDLGDHDPDG PLPEVDPVPGENTVAQGRASVRMYEDRLATARRWREIAEAGKLTTRELVIEVSGRQAFVGSPATVADTINRFVQARAADG FILVPHITPAGLDEFADTVVPLLQERGVFRADYTGTTLRDHLGLAPVPGWPVHAV >Mature_454_residues SSPTRQIHLAAHFPGVNNTTVWSDPRSGSHIAFESFVHFARTAERAKFDFLFLAEGLRLREQRGRIHDLDVVGRPDTFTV LAALAAVTDRLGLAGTINSTFNEPYEVARQFASLDHLSDGRAAWNVVTSWDAFTGENFRRGGFLAEEQRYERAELFLRTA SELFDSWRGDEIVADKESGVFLADAKAGAFEHHDAHFDISGQFTVPRSPQGRPVIFQAGDSDAGREFAARSADAIFSRHS TFDAGQAFHADVKRRLARYGRAPEDLLVLPAATFVLGDTDAQARERAEEVRRQQVSGATAIQFLEQVWNRDLGDHDPDGP LPEVDPVPGENTVAQGRASVRMYEDRLATARRWREIAEAGKLTTRELVIEVSGRQAFVGSPATVADTINRFVQARAADGF ILVPHITPAGLDEFADTVVPLLQERGVFRADYTGTTLRDHLGLAPVPGWPVHAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1787247, Length=396, Percent_Identity=23.989898989899, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR016215 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 50212; Mature: 50081
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPTRQIHLAAHFPGVNNTTVWSDPRSGSHIAFESFVHFARTAERAKFDFLFLAEGLRL CCCCCCEEEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH REQRGRIHDLDVVGRPDTFTVLAALAAVTDRLGLAGTINSTFNEPYEVARQFASLDHLSD HHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCC GRAAWNVVTSWDAFTGENFRRGGFLAEEQRYERAELFLRTASELFDSWRGDEIVADKESG CCHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC VFLADAKAGAFEHHDAHFDISGQFTVPRSPQGRPVIFQAGDSDAGREFAARSADAIFSRH EEEEECCCCCCCCCCCEEECCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC STFDAGQAFHADVKRRLARYGRAPEDLLVLPAATFVLGDTDAQARERAEEVRRQQVSGAT CCCCCCHHHHHHHHHHHHHHCCCCCCEEEECEEEEEECCCCHHHHHHHHHHHHHHHCCHH AIQFLEQVWNRDLGDHDPDGPLPEVDPVPGENTVAQGRASVRMYEDRLATARRWREIAEA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHH GKLTTRELVIEVSGRQAFVGSPATVADTINRFVQARAADGFILVPHITPAGLDEFADTVV CCCEEEEEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH PLLQERGVFRADYTGTTLRDHLGLAPVPGWPVHAV HHHHHCCCEEECCCCCHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SSPTRQIHLAAHFPGVNNTTVWSDPRSGSHIAFESFVHFARTAERAKFDFLFLAEGLRL CCCCCEEEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH REQRGRIHDLDVVGRPDTFTVLAALAAVTDRLGLAGTINSTFNEPYEVARQFASLDHLSD HHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCC GRAAWNVVTSWDAFTGENFRRGGFLAEEQRYERAELFLRTASELFDSWRGDEIVADKESG CCHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC VFLADAKAGAFEHHDAHFDISGQFTVPRSPQGRPVIFQAGDSDAGREFAARSADAIFSRH EEEEECCCCCCCCCCCEEECCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC STFDAGQAFHADVKRRLARYGRAPEDLLVLPAATFVLGDTDAQARERAEEVRRQQVSGAT CCCCCCHHHHHHHHHHHHHHCCCCCCEEEECEEEEEECCCCHHHHHHHHHHHHHHHCCHH AIQFLEQVWNRDLGDHDPDGPLPEVDPVPGENTVAQGRASVRMYEDRLATARRWREIAEA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHH GKLTTRELVIEVSGRQAFVGSPATVADTINRFVQARAADGFILVPHITPAGLDEFADTVV CCCEEEEEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH PLLQERGVFRADYTGTTLRDHLGLAPVPGWPVHAV HHHHHCCCEEECCCCCHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]