| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yxeK [H]
Identifier: 158313851
GI number: 158313851
Start: 2421790
End: 2422986
Strand: Direct
Name: yxeK [H]
Synonym: Franean1_2016
Alternate gene names: 158313851
Gene position: 2421790-2422986 (Clockwise)
Preceding gene: 158313850
Following gene: 158313852
Centisome position: 26.96
GC content: 76.36
Gene sequence:
>1197_bases ATGACCGGTCCCACCGCCCCGGGCGAGCTGCGGCTCGCCGTCGCGCTCGACGGCTGCGGCTGGCACCCCGCCGCGTGGCG GGAGCCCGACGCCCGTCCCCGCGAGCTGTTCTCCGGCCGTTACTGGACGGAGCTCGTCCAGGAGGCCGAGCGTGGCCGGC TCGACTTCGTGACGATTGAGGACACTCTGGCGCTGCAGTCGTCCCGGTATGACGGCCCGGACGGCCGGGTCGACGAGGTC CGCGGCCGGCTTGACGCTGTCCTGGTGGCGGCCCGCGCCGCGCCGCGCACGCGGGGCATCGGCCTCGTCCCGACGGTGGT CGTGACACACACCGAGCCGTTCCACGTGGCCAAGGCCGTCGCCACTCTCGACCATGTCAGCTCCGGGCGGGCCGGGGTGC GGGTCAGGGTCCGCGCGGGGCGGGACGAGGCCGCCCACTTCGGCCGTCGTGACCTGCCGCCGGCGCGGCCCGCGGACCTG TTCGACGAGGCCGCGGACCACGTCGAGGTCATGCGCCGGCTGTGGGACAGCTGGGAGGACGACGCCGAGATCCGCGACGT GGCCACGGGGCGGTTCATCGACCGCGACAAGCTGCACCACATCGACTTCGCGGGCCGGTGGTTCAGCGTGCGGGGGCCGT CGATCGTGCCGCGCCCGCCGCAGGGGCAGCCGCTGGTCACCGCGCTCGCGCACGCGGCCGTCCCGTACCGTTTCGCCGCG GGTTCGGTGGACCTCGTCCACGTGACACCGCGCGACGCCGCCGACGCGGCGCGGATCCTGCGCGACCTGCGGGCCGAGCA GGCCGCGGCCGGGCGGCTCGCGGAGTCCCTGCGGGTGTTCGCCGACCTGGTGGTGTTCCTCGACGACGCTGAGGGCCGGG CCGCCGCGCGCAGGGCCGGCCTGGACGAGCTCGCGGGCCGGGAGTTCCGGTCGGACGCCGCCGTCTTCGCCGGCACGCCG GCCGGCCTCGCCGACGTCCTCGAGGAGTGGGCGGGGGCGGGTATCGACGGATTTCAGCTGCGCCCGGCGGGGGTTCCCAC CGATCTGACCGCGATCACCCGCGGGCTGGTGCCGGAGCTCCGGCGTCGTGGCCTGGTTCCGCCCGAGTACGGCGCGGGCA CGCTGCGCGGCCTGCTCGGGTTCCCCCGGGCGGCCAACCGCTACGCCGCCGCCCCACCCGAACCCGCCGCCACCTGA
Upstream 100 bases:
>100_bases TGCTGATCACCACGATCACCCACGATCACGCCGATCGCGTGCGTTCCTACGAGCTGCTCGCCGAGGCCTGGTCCCGGTTG AGCGCGGTGGGCTGACATCG
Downstream 100 bases:
>100_bases CGCGTCCGTCCCGACCGGGAGGAACCGGATGAGCAGCCCGACCAGGCAGATCCACCTCGCCGCGCACTTCCCGGGCGTGA ACAACACGACCGTGTGGAGC
Product: putative FMNH2-utilizing oxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTGPTAPGELRLAVALDGCGWHPAAWREPDARPRELFSGRYWTELVQEAERGRLDFVTIEDTLALQSSRYDGPDGRVDEV RGRLDAVLVAARAAPRTRGIGLVPTVVVTHTEPFHVAKAVATLDHVSSGRAGVRVRVRAGRDEAAHFGRRDLPPARPADL FDEAADHVEVMRRLWDSWEDDAEIRDVATGRFIDRDKLHHIDFAGRWFSVRGPSIVPRPPQGQPLVTALAHAAVPYRFAA GSVDLVHVTPRDAADAARILRDLRAEQAAAGRLAESLRVFADLVVFLDDAEGRAAARRAGLDELAGREFRSDAAVFAGTP AGLADVLEEWAGAGIDGFQLRPAGVPTDLTAITRGLVPELRRRGLVPPEYGAGTLRGLLGFPRAANRYAAAPPEPAAT
Sequences:
>Translated_398_residues MTGPTAPGELRLAVALDGCGWHPAAWREPDARPRELFSGRYWTELVQEAERGRLDFVTIEDTLALQSSRYDGPDGRVDEV RGRLDAVLVAARAAPRTRGIGLVPTVVVTHTEPFHVAKAVATLDHVSSGRAGVRVRVRAGRDEAAHFGRRDLPPARPADL FDEAADHVEVMRRLWDSWEDDAEIRDVATGRFIDRDKLHHIDFAGRWFSVRGPSIVPRPPQGQPLVTALAHAAVPYRFAA GSVDLVHVTPRDAADAARILRDLRAEQAAAGRLAESLRVFADLVVFLDDAEGRAAARRAGLDELAGREFRSDAAVFAGTP AGLADVLEEWAGAGIDGFQLRPAGVPTDLTAITRGLVPELRRRGLVPPEYGAGTLRGLLGFPRAANRYAAAPPEPAAT >Mature_397_residues TGPTAPGELRLAVALDGCGWHPAAWREPDARPRELFSGRYWTELVQEAERGRLDFVTIEDTLALQSSRYDGPDGRVDEVR GRLDAVLVAARAAPRTRGIGLVPTVVVTHTEPFHVAKAVATLDHVSSGRAGVRVRVRAGRDEAAHFGRRDLPPARPADLF DEAADHVEVMRRLWDSWEDDAEIRDVATGRFIDRDKLHHIDFAGRWFSVRGPSIVPRPPQGQPLVTALAHAAVPYRFAAG SVDLVHVTPRDAADAARILRDLRAEQAAAGRLAESLRVFADLVVFLDDAEGRAAARRAGLDELAGREFRSDAAVFAGTPA GLADVLEEWAGAGIDGFQLRPAGVPTDLTAITRGLVPELRRRGLVPPEYGAGTLRGLLGFPRAANRYAAAPPEPAAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR016215 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 43043; Mature: 42912
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPTAPGELRLAVALDGCGWHPAAWREPDARPRELFSGRYWTELVQEAERGRLDFVTIE CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCEEEEEEH DTLALQSSRYDGPDGRVDEVRGRLDAVLVAARAAPRTRGIGLVPTVVVTHTEPFHVAKAV HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHH ATLDHVSSGRAGVRVRVRAGRDEAAHFGRRDLPPARPADLFDEAADHVEVMRRLWDSWED HHHHHHCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC DAEIRDVATGRFIDRDKLHHIDFAGRWFSVRGPSIVPRPPQGQPLVTALAHAAVPYRFAA CCHHHHHHCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEC GSVDLVHVTPRDAADAARILRDLRAEQAAAGRLAESLRVFADLVVFLDDAEGRAAARRAG CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHCC LDELAGREFRSDAAVFAGTPAGLADVLEEWAGAGIDGFQLRPAGVPTDLTAITRGLVPEL HHHHHCCHHHCCCEEEECCCCCHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHH RRRGLVPPEYGAGTLRGLLGFPRAANRYAAAPPEPAAT HHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TGPTAPGELRLAVALDGCGWHPAAWREPDARPRELFSGRYWTELVQEAERGRLDFVTIE CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCEEEEEEH DTLALQSSRYDGPDGRVDEVRGRLDAVLVAARAAPRTRGIGLVPTVVVTHTEPFHVAKAV HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHH ATLDHVSSGRAGVRVRVRAGRDEAAHFGRRDLPPARPADLFDEAADHVEVMRRLWDSWED HHHHHHCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC DAEIRDVATGRFIDRDKLHHIDFAGRWFSVRGPSIVPRPPQGQPLVTALAHAAVPYRFAA CCHHHHHHCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEC GSVDLVHVTPRDAADAARILRDLRAEQAAAGRLAESLRVFADLVVFLDDAEGRAAARRAG CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHCC LDELAGREFRSDAAVFAGTPAGLADVLEEWAGAGIDGFQLRPAGVPTDLTAITRGLVPEL HHHHHCCHHHCCCEEEECCCCCHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHH RRRGLVPPEYGAGTLRGLLGFPRAANRYAAAPPEPAAT HHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]