Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313805

Identifier: 158313805

GI number: 158313805

Start: 2367046

End: 2368635

Strand: Direct

Name: 158313805

Synonym: Franean1_1970

Alternate gene names: NA

Gene position: 2367046-2368635 (Clockwise)

Preceding gene: 158313804

Following gene: 158313807

Centisome position: 26.35

GC content: 75.35

Gene sequence:

>1590_bases
ATGCCGGCTGACCAGAAGACCGCGACGTCCGTCCCGGCTGATCTGTGGTCTCGCCCGACCGGCGAGACGCGGGTCGTCGA
GACGGGGAGCGCGGTCCTCTGCCTGCACGGTGATCGTGTCTACAAACGGAAGAAACCCGTTGAGCCGGGGCTCCTCGACC
TGCGGAGCCGGGCGGCCCGGCTGGCGGCCTGCCGCGCCGAGGTGGAGCTGAACCGGTGGCTCGCTTCCGACGTGTACCTG
GGGGTCGCCGACGTCCTCGGCGACGGCGGCGAGGTGTGCGACCATGCCGTTGTCCTGCGGCGAATGCCCACCGGCCGCCG
GCTCTCCGCGCTGGTGCGCCACGCGGACCGCGTCGACGACCAGCTCCGCGCCGTCGCGCGGACGGTCGCCGCGTTCCACG
AGCGGTGCGGGACGTCCGAGGTGATCGGCCGTTCCGGCGACGCCGAGGCTGTCGCGGGGCAGTGGAAGGAGACGCTCGGC
GGCCTCGAGCCCTTCCAGGGGAAGGTCATCGACGCCGACGTCGTCGACGAGATCGGGCGGCTGGCGCTGCGGTACCTGGC
CGGCCGCGGCCCGCTGCTGGCCGAGCGCCGGCGCGCCGGGCGGATCCGCGACGGCCACGGCGACCTGCGGGCCGAGAACA
TCCACTGCCTCGACGACGGCCCGCGCATCCTGAACCGGGTCGAGTCCGACCCGCGGCTGCGGGCCGGGGACGTCCTCGGC
GACGTCGCCGTTCTGGTGATGGACCTGGAGCGGCTCGGCTCGCCCGAGGACGCCGAGCGCCTGATGCGCTGGTACCGCGA
CTTCTCCGCGCAGGCCCATCCGCCTTCGCTCGAGCACTTCTACATCGCCTACCGGGCCTTCACCGAGGCCCGGGTGACCT
GCCTGCGGTACCGGCGGATCCTGGCCGAGGCGGGGGCGGAGGCCGGCCCGGGCCCGGGCGCCGAGGCCGGCGAACGGGCC
CGGCGGCTCGCCGACATCGCCTACCGGCACCTGCGCCGGGCCCGGGTACGGCTGGTCCTGGTCGGCGGCCTGCCTGGCAC
CGGGAAATCGACCCTCGCCCGGCGGCTCGCCGACGCGGACGACGGCCGCCTGCTGCTGCGCTCCGACGCCGTGCGGGCGG
AGCTCGCCGCCGACGGCCACGCCGATCCGGACACCCCCGGTAGCGGGCCTGCCATCCCGGACCGGCCCGCCGTGCCCGCG
GACCTCGGCGCGTCCTTCATCTGGCCGTTGTCCTCGGAGATCACCGCGCGGACCTACACGGTGCTGCTGTCCCGTGCCCG
CCGGGCACTGGAACGCGGCGAGACGGTGATCATCGACGCCTCCTGGTCGGATGGCCGCCACCGCGCGGCGGCCGCGCGGC
TGGCGCGCGAGACGGCCGCGGAGTTCCTCGAGCTGCGCTGCGTGACCTCACCGGAGGTCGCGGCCACGCGGCTGACCCGC
CGGGACTCCGCCAGCGACCCAGCTGGCGCCACGTCCGCGGTACACCGCGCGATGAGCTCGTGGGCGGAGCCGTGGCCGAC
CGCCAGGGTGATCCAGACGACCGTGCCGGTCGCCGAGGTGTTCCACGCCGCCGAGCGCTGCATCGCCTGA

Upstream 100 bases:

>100_bases
CGATGGTTCCGGGCGAGACGGACCATCGACAGGACAGCGGCGATCGGATCCCGGCGGCGGGGGCGGCGGGGGCGGCGGTG
TCCGGCGCGCAGGAGGTGCC

Downstream 100 bases:

>100_bases
CGGGCGTCCGGCGGCCCGACGGCCGCTTTCAGGCGCTGCCGTCAGGCGTGGCGACGCGCGGCGTACACGGCGGCCTGCGT
ACGGCTGCTCAGGCCCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MPADQKTATSVPADLWSRPTGETRVVETGSAVLCLHGDRVYKRKKPVEPGLLDLRSRAARLAACRAEVELNRWLASDVYL
GVADVLGDGGEVCDHAVVLRRMPTGRRLSALVRHADRVDDQLRAVARTVAAFHERCGTSEVIGRSGDAEAVAGQWKETLG
GLEPFQGKVIDADVVDEIGRLALRYLAGRGPLLAERRRAGRIRDGHGDLRAENIHCLDDGPRILNRVESDPRLRAGDVLG
DVAVLVMDLERLGSPEDAERLMRWYRDFSAQAHPPSLEHFYIAYRAFTEARVTCLRYRRILAEAGAEAGPGPGAEAGERA
RRLADIAYRHLRRARVRLVLVGGLPGTGKSTLARRLADADDGRLLLRSDAVRAELAADGHADPDTPGSGPAIPDRPAVPA
DLGASFIWPLSSEITARTYTVLLSRARRALERGETVIIDASWSDGRHRAAAARLARETAAEFLELRCVTSPEVAATRLTR
RDSASDPAGATSAVHRAMSSWAEPWPTARVIQTTVPVAEVFHAAERCIA

Sequences:

>Translated_529_residues
MPADQKTATSVPADLWSRPTGETRVVETGSAVLCLHGDRVYKRKKPVEPGLLDLRSRAARLAACRAEVELNRWLASDVYL
GVADVLGDGGEVCDHAVVLRRMPTGRRLSALVRHADRVDDQLRAVARTVAAFHERCGTSEVIGRSGDAEAVAGQWKETLG
GLEPFQGKVIDADVVDEIGRLALRYLAGRGPLLAERRRAGRIRDGHGDLRAENIHCLDDGPRILNRVESDPRLRAGDVLG
DVAVLVMDLERLGSPEDAERLMRWYRDFSAQAHPPSLEHFYIAYRAFTEARVTCLRYRRILAEAGAEAGPGPGAEAGERA
RRLADIAYRHLRRARVRLVLVGGLPGTGKSTLARRLADADDGRLLLRSDAVRAELAADGHADPDTPGSGPAIPDRPAVPA
DLGASFIWPLSSEITARTYTVLLSRARRALERGETVIIDASWSDGRHRAAAARLARETAAEFLELRCVTSPEVAATRLTR
RDSASDPAGATSAVHRAMSSWAEPWPTARVIQTTVPVAEVFHAAERCIA
>Mature_528_residues
PADQKTATSVPADLWSRPTGETRVVETGSAVLCLHGDRVYKRKKPVEPGLLDLRSRAARLAACRAEVELNRWLASDVYLG
VADVLGDGGEVCDHAVVLRRMPTGRRLSALVRHADRVDDQLRAVARTVAAFHERCGTSEVIGRSGDAEAVAGQWKETLGG
LEPFQGKVIDADVVDEIGRLALRYLAGRGPLLAERRRAGRIRDGHGDLRAENIHCLDDGPRILNRVESDPRLRAGDVLGD
VAVLVMDLERLGSPEDAERLMRWYRDFSAQAHPPSLEHFYIAYRAFTEARVTCLRYRRILAEAGAEAGPGPGAEAGERAR
RLADIAYRHLRRARVRLVLVGGLPGTGKSTLARRLADADDGRLLLRSDAVRAELAADGHADPDTPGSGPAIPDRPAVPAD
LGASFIWPLSSEITARTYTVLLSRARRALERGETVIIDASWSDGRHRAAAARLARETAAEFLELRCVTSPEVAATRLTRR
DSASDPAGATSAVHRAMSSWAEPWPTARVIQTTVPVAEVFHAAERCIA

Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]

COG id: COG2187

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR010488 [H]

Pfam domain/function: PF06414 Zeta_toxin [H]

EC number: NA

Molecular weight: Translated: 57518; Mature: 57387

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPADQKTATSVPADLWSRPTGETRVVETGSAVLCLHGDRVYKRKKPVEPGLLDLRSRAAR
CCCCCCCCCCCCHHHHCCCCCCCEEEECCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHH
LAACRAEVELNRWLASDVYLGVADVLGDGGEVCDHAVVLRRMPTGRRLSALVRHADRVDD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QLRAVARTVAAFHERCGTSEVIGRSGDAEAVAGQWKETLGGLEPFQGKVIDADVVDEIGR
HHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHH
LALRYLAGRGPLLAERRRAGRIRDGHGDLRAENIHCLDDGPRILNRVESDPRLRAGDVLG
HHHHHHHCCCCHHHHHHHCCCCCCCCCCCEECCEEECCCCHHHHHHCCCCCCCCHHHHHH
DVAVLVMDLERLGSPEDAERLMRWYRDFSAQAHPPSLEHFYIAYRAFTEARVTCLRYRRI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAEAGAEAGPGPGAEAGERARRLADIAYRHLRRARVRLVLVGGLPGTGKSTLARRLADAD
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCC
DGRLLLRSDAVRAELAADGHADPDTPGSGPAIPDRPAVPADLGASFIWPLSSEITARTYT
CCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEECCCCCHHHHHHHH
VLLSRARRALERGETVIIDASWSDGRHRAAAARLARETAAEFLELRCVTSPEVAATRLTR
HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RDSASDPAGATSAVHRAMSSWAEPWPTARVIQTTVPVAEVFHAAERCIA
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PADQKTATSVPADLWSRPTGETRVVETGSAVLCLHGDRVYKRKKPVEPGLLDLRSRAAR
CCCCCCCCCCCHHHHCCCCCCCEEEECCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHH
LAACRAEVELNRWLASDVYLGVADVLGDGGEVCDHAVVLRRMPTGRRLSALVRHADRVDD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QLRAVARTVAAFHERCGTSEVIGRSGDAEAVAGQWKETLGGLEPFQGKVIDADVVDEIGR
HHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHH
LALRYLAGRGPLLAERRRAGRIRDGHGDLRAENIHCLDDGPRILNRVESDPRLRAGDVLG
HHHHHHHCCCCHHHHHHHCCCCCCCCCCCEECCEEECCCCHHHHHHCCCCCCCCHHHHHH
DVAVLVMDLERLGSPEDAERLMRWYRDFSAQAHPPSLEHFYIAYRAFTEARVTCLRYRRI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAEAGAEAGPGPGAEAGERARRLADIAYRHLRRARVRLVLVGGLPGTGKSTLARRLADAD
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCC
DGRLLLRSDAVRAELAADGHADPDTPGSGPAIPDRPAVPADLGASFIWPLSSEITARTYT
CCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEECCCCCHHHHHHHH
VLLSRARRALERGETVIIDASWSDGRHRAAAARLARETAAEFLELRCVTSPEVAATRLTR
HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RDSASDPAGATSAVHRAMSSWAEPWPTARVIQTTVPVAEVFHAAERCIA
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]