| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313773
Identifier: 158313773
GI number: 158313773
Start: 2326669
End: 2328831
Strand: Direct
Name: 158313773
Synonym: Franean1_1938
Alternate gene names: NA
Gene position: 2326669-2328831 (Clockwise)
Preceding gene: 158313772
Following gene: 158313774
Centisome position: 25.9
GC content: 73.0
Gene sequence:
>2163_bases GTGCGGGACAGCCCCCGGCGTCGGGCGGGCCAGTGGGGGCTGGCCGTGTTGCTGGCGCTCCTCTGGCTGCCCTTCGTCGT GCTCGCCACCTCGCGCACGACCGTTCTGAGCGCGGACTTCTACTCCCAGGCGCTCACCGAGGCGAACGCCTACGACCGCC TCTACACCGAGGTGCTGCCCGACCCCGCCGTCGAATCCCTGCTCTCCGGCCTGCCCGTCGACCCCACCCTGGTCACCGCG AACCTGCGCACGGTGCTGCCGCCGTCGACGGTGGAGGCGATGACCGACGAGCAGATCGGGCGCATCGTCGACTACCTGCG CGCGCGCCAGGACGACATCGAGTTCAGCGTCGACCTGACCCCGATCTTCGGCAACATCTCCGGCCTGGCCAACCGCTACA TCGCGGGCGAGATCGGCACCGGCACGAGCTACCAGGTCGAGTCGGTCACCCAGTTCACCCGCTCCGTCCTCGACGCGCTC GACGACATCGTCGCCGGTCGACCGCCCACCGCGCTGCCCACCATGGAGCTCTCGGCGCAGGACACCGACCGGGTGGTGGA GGCGGTGCTCGGCCGGCTGAAGCCGGCGGACCGCGACGCGGTGGCCGCCCCCCTGCGCGCGGACCTGCGCTCCGGTGACG TGGCCGGAGCGCTGGCCCGGGTCGGTCCGCTGCTGTTCGAGGGCGACGAGCGGGCGGTCGGCGAGATGCGCGCCCACCTC ACCGACGGTGCCGTGCTCAACCTGGGCGTCCGCCTCTCCGACCTGCGCGACGAGCCCGCGATCAGCGCCGTGTCCAAGCT GCACGACGTCTCGGCGGCGCTCGACGGGCTCAGCCTGGCGCTGCTGGGCCTCGCCGGGCTGATCTGCGTGGCGATCGTCG CACTGGCAGCCGCCCGCGGCCGGTCCCGGATGCGGGCGCTGGCGGGGGCGGTCGTCGTCGCCGGGGTCGCGGCGGGCGTC CTGGGCGTGGTGCTGCGGATGCTGCTGCCTAACCCGCTGCTCGCCCTGGAGAAGCCCGGTGGGCCGCTGCCGCCCGGCGC CGGCGCGGTGCTCGCCGACTTCTCCCGGCACGCGTACGGCGACATCGAGTCCGACTACCTGCGCATCGTCGCCTGGACGC TCGCGGTGGGGCTGGCGATCCTCGGCGGCGCGCTGCTCGTGGCACTCTCCGCGCGCTGGGGCCGGGCCGGCCGGCGCCGC CGCCTCGCCGCCGGCTTCGCCGTGGCCGCCCCGATGATGATCGTGCTGACCTGGCTCGCCTTCCCCGGTGCCGCGGCGAA CGCGCGGGAGCTGTGTAACAGCCAGGTCCGCCTGTGCGACAGCCGGTACGATGAGGTGACCTACCTGGCCACCCACAACG CGATGGCGACCAGCGAGGACCGCTTCCTCGGCCCGACCCAGGACCCGTCACTGGTGCACCAGCTCGACCTCGGGGTGCGC GCCCTGCTGCTCGACGTCCACCACTGGACGACGCCCGAGCAGGTGGACGCCGTCCTCGAGACGTTGCCGCCCTCGACCCG CACGGCCATCGAGCCGCTGACCCGCAACGCCCGGTCGGCCCGGCCGGGGCTGTGGCTGTGCCACAACCTGTGCCAGCTCG GGGCGCTCGACCTGACCGCGGAACTCGGCCAGGTCCGGGACTGGATGGACCGAAACCCCACCGAGGTGGTGACGTTGATC ATTCAGGATCAGGTGCCCGCGCCGGAGATCGCCGGCGCCGTCGCGCAGGCCGGCCTGTCCCGCATCGTCGCCACCCCGCC GGCCGATGAGGACGGCGAGTGGCCCACGTTGCGGGAGATGGTCGAGTCCGGCCGGCGCCTCGTCGTCTTCACCGAGAGCC AGGACATGCCCGGGACATTCCTGCGCAGTTTCTACCGCTACGCGTCGGACACCCCGTTCTCGGTGGACTCCCCGGAGAAA CTGACCGGCTGCGCCCGCCTGCGGGGAGCCGCGGGATCGCCGCTGCTCCTGCTCAACAACTGGGTGACGGACGCGGCACC CAGCCGGCAGGCCGCCGTGGTCGCGAACCGTGCCGACCGGATCCTCACGCGGTCCAGGCAGTGCGAGACCGAACAGGGCC GGCGCCCCACCTTCGTCGCGGTCGATTTTGTCAACATCGGTGACGCGGCCGCCGCGGTCGACCGGTTGAACGCCGTCAAC TGA
Upstream 100 bases:
>100_bases CGGCTTCGCCGGTGCTGGTGGCTCCGGTCGCTCCAGGCGCGGGTGGCGTTCCGGCCGCCTCCCGGATGCCGGGCGGTCCC GGGCCTCGGGCGGGCGGGTC
Downstream 100 bases:
>100_bases CCGCTTTGCGGTTAATGTCGGAGGCTATCTGGCTGATTCATAATTCTGAATGACAGACCGCGCATTGTCGGTGCGGAGAT GAGACGTCCCCGCCGGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 720; Mature: 720
Protein sequence:
>720_residues MRDSPRRRAGQWGLAVLLALLWLPFVVLATSRTTVLSADFYSQALTEANAYDRLYTEVLPDPAVESLLSGLPVDPTLVTA NLRTVLPPSTVEAMTDEQIGRIVDYLRARQDDIEFSVDLTPIFGNISGLANRYIAGEIGTGTSYQVESVTQFTRSVLDAL DDIVAGRPPTALPTMELSAQDTDRVVEAVLGRLKPADRDAVAAPLRADLRSGDVAGALARVGPLLFEGDERAVGEMRAHL TDGAVLNLGVRLSDLRDEPAISAVSKLHDVSAALDGLSLALLGLAGLICVAIVALAAARGRSRMRALAGAVVVAGVAAGV LGVVLRMLLPNPLLALEKPGGPLPPGAGAVLADFSRHAYGDIESDYLRIVAWTLAVGLAILGGALLVALSARWGRAGRRR RLAAGFAVAAPMMIVLTWLAFPGAAANARELCNSQVRLCDSRYDEVTYLATHNAMATSEDRFLGPTQDPSLVHQLDLGVR ALLLDVHHWTTPEQVDAVLETLPPSTRTAIEPLTRNARSARPGLWLCHNLCQLGALDLTAELGQVRDWMDRNPTEVVTLI IQDQVPAPEIAGAVAQAGLSRIVATPPADEDGEWPTLREMVESGRRLVVFTESQDMPGTFLRSFYRYASDTPFSVDSPEK LTGCARLRGAAGSPLLLLNNWVTDAAPSRQAAVVANRADRILTRSRQCETEQGRRPTFVAVDFVNIGDAAAAVDRLNAVN
Sequences:
>Translated_720_residues MRDSPRRRAGQWGLAVLLALLWLPFVVLATSRTTVLSADFYSQALTEANAYDRLYTEVLPDPAVESLLSGLPVDPTLVTA NLRTVLPPSTVEAMTDEQIGRIVDYLRARQDDIEFSVDLTPIFGNISGLANRYIAGEIGTGTSYQVESVTQFTRSVLDAL DDIVAGRPPTALPTMELSAQDTDRVVEAVLGRLKPADRDAVAAPLRADLRSGDVAGALARVGPLLFEGDERAVGEMRAHL TDGAVLNLGVRLSDLRDEPAISAVSKLHDVSAALDGLSLALLGLAGLICVAIVALAAARGRSRMRALAGAVVVAGVAAGV LGVVLRMLLPNPLLALEKPGGPLPPGAGAVLADFSRHAYGDIESDYLRIVAWTLAVGLAILGGALLVALSARWGRAGRRR RLAAGFAVAAPMMIVLTWLAFPGAAANARELCNSQVRLCDSRYDEVTYLATHNAMATSEDRFLGPTQDPSLVHQLDLGVR ALLLDVHHWTTPEQVDAVLETLPPSTRTAIEPLTRNARSARPGLWLCHNLCQLGALDLTAELGQVRDWMDRNPTEVVTLI IQDQVPAPEIAGAVAQAGLSRIVATPPADEDGEWPTLREMVESGRRLVVFTESQDMPGTFLRSFYRYASDTPFSVDSPEK LTGCARLRGAAGSPLLLLNNWVTDAAPSRQAAVVANRADRILTRSRQCETEQGRRPTFVAVDFVNIGDAAAAVDRLNAVN >Mature_720_residues MRDSPRRRAGQWGLAVLLALLWLPFVVLATSRTTVLSADFYSQALTEANAYDRLYTEVLPDPAVESLLSGLPVDPTLVTA NLRTVLPPSTVEAMTDEQIGRIVDYLRARQDDIEFSVDLTPIFGNISGLANRYIAGEIGTGTSYQVESVTQFTRSVLDAL DDIVAGRPPTALPTMELSAQDTDRVVEAVLGRLKPADRDAVAAPLRADLRSGDVAGALARVGPLLFEGDERAVGEMRAHL TDGAVLNLGVRLSDLRDEPAISAVSKLHDVSAALDGLSLALLGLAGLICVAIVALAAARGRSRMRALAGAVVVAGVAAGV LGVVLRMLLPNPLLALEKPGGPLPPGAGAVLADFSRHAYGDIESDYLRIVAWTLAVGLAILGGALLVALSARWGRAGRRR RLAAGFAVAAPMMIVLTWLAFPGAAANARELCNSQVRLCDSRYDEVTYLATHNAMATSEDRFLGPTQDPSLVHQLDLGVR ALLLDVHHWTTPEQVDAVLETLPPSTRTAIEPLTRNARSARPGLWLCHNLCQLGALDLTAELGQVRDWMDRNPTEVVTLI IQDQVPAPEIAGAVAQAGLSRIVATPPADEDGEWPTLREMVESGRRLVVFTESQDMPGTFLRSFYRYASDTPFSVDSPEK LTGCARLRGAAGSPLLLLNNWVTDAAPSRQAAVVANRADRILTRSRQCETEQGRRPTFVAVDFVNIGDAAAAVDRLNAVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76972; Mature: 76972
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDSPRRRAGQWGLAVLLALLWLPFVVLATSRTTVLSADFYSQALTEANAYDRLYTEVLP CCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCC DPAVESLLSGLPVDPTLVTANLRTVLPPSTVEAMTDEQIGRIVDYLRARQDDIEFSVDLT CHHHHHHHCCCCCCCEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE PIFGNISGLANRYIAGEIGTGTSYQVESVTQFTRSVLDALDDIVAGRPPTALPTMELSAQ EHHHCHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DTDRVVEAVLGRLKPADRDAVAAPLRADLRSGDVAGALARVGPLLFEGDERAVGEMRAHL HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEECCCHHHHHHHHHHH TDGAVLNLGVRLSDLRDEPAISAVSKLHDVSAALDGLSLALLGLAGLICVAIVALAAARG CCCCEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSRMRALAGAVVVAGVAAGVLGVVLRMLLPNPLLALEKPGGPLPPGAGAVLADFSRHAYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCC DIESDYLRIVAWTLAVGLAILGGALLVALSARWGRAGRRRRLAAGFAVAAPMMIVLTWLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FPGAAANARELCNSQVRLCDSRYDEVTYLATHNAMATSEDRFLGPTQDPSLVHQLDLGVR CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH ALLLDVHHWTTPEQVDAVLETLPPSTRTAIEPLTRNARSARPGLWLCHNLCQLGALDLTA HHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH ELGQVRDWMDRNPTEVVTLIIQDQVPAPEIAGAVAQAGLSRIVATPPADEDGEWPTLREM HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHH VESGRRLVVFTESQDMPGTFLRSFYRYASDTPFSVDSPEKLTGCARLRGAAGSPLLLLNN HHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEC WVTDAAPSRQAAVVANRADRILTRSRQCETEQGRRPTFVAVDFVNIGDAAAAVDRLNAVN CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEEEECCHHHHHHHHHHCCC >Mature Secondary Structure MRDSPRRRAGQWGLAVLLALLWLPFVVLATSRTTVLSADFYSQALTEANAYDRLYTEVLP CCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCC DPAVESLLSGLPVDPTLVTANLRTVLPPSTVEAMTDEQIGRIVDYLRARQDDIEFSVDLT CHHHHHHHCCCCCCCEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE PIFGNISGLANRYIAGEIGTGTSYQVESVTQFTRSVLDALDDIVAGRPPTALPTMELSAQ EHHHCHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DTDRVVEAVLGRLKPADRDAVAAPLRADLRSGDVAGALARVGPLLFEGDERAVGEMRAHL HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEECCCHHHHHHHHHHH TDGAVLNLGVRLSDLRDEPAISAVSKLHDVSAALDGLSLALLGLAGLICVAIVALAAARG CCCCEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSRMRALAGAVVVAGVAAGVLGVVLRMLLPNPLLALEKPGGPLPPGAGAVLADFSRHAYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCC DIESDYLRIVAWTLAVGLAILGGALLVALSARWGRAGRRRRLAAGFAVAAPMMIVLTWLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FPGAAANARELCNSQVRLCDSRYDEVTYLATHNAMATSEDRFLGPTQDPSLVHQLDLGVR CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH ALLLDVHHWTTPEQVDAVLETLPPSTRTAIEPLTRNARSARPGLWLCHNLCQLGALDLTA HHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH ELGQVRDWMDRNPTEVVTLIIQDQVPAPEIAGAVAQAGLSRIVATPPADEDGEWPTLREM HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHH VESGRRLVVFTESQDMPGTFLRSFYRYASDTPFSVDSPEKLTGCARLRGAAGSPLLLLNN HHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEC WVTDAAPSRQAAVVANRADRILTRSRQCETEQGRRPTFVAVDFVNIGDAAAAVDRLNAVN CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA