| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is trpE [H]
Identifier: 158313763
GI number: 158313763
Start: 2310397
End: 2311974
Strand: Direct
Name: trpE [H]
Synonym: Franean1_1928
Alternate gene names: 158313763
Gene position: 2310397-2311974 (Clockwise)
Preceding gene: 158313762
Following gene: 158313764
Centisome position: 25.72
GC content: 71.55
Gene sequence:
>1578_bases ATGACCACCGGCGAGATCACACCGAGCCGGGCGGAGTTCCACGAGCTCGCCGCGCGCCAGCCGGTCGTCGCGGTGTCCCG CCGCCTGCTCGCCGACGGCGAGACACCGGTCGGGGTCTACCGCAAGCTGGCCGGCGGGCCGGGGACGTTTCTGCTCGAGT CTGCCGAGCACGGGGGCGTGTGGTCGCGTTACTCCTTCGTCGGCGTCCGTGCCGCGGCCACACTCACTGAACGGGACGGG CAGGCCGCCTGGACGGACGGAACCCCGCCGCCCGGTGTCCCGCTCGACGGCGACCCGCTCGATGTCCTGCGTGCCGTGGA ACGCCAGCTCTGCTCGGCCCGGCCGAGTGGCACTCCGCCGCTGCTGGGCGGCCTGGTCGGGTACCTCTCGTACGACATCG TCCGGCGCATCGAGCGGTTGCCCGCCCGGGCAACCGACGATCTCGGGATGCCCGAGCTGCGGATGCTCCTGACGACCGAC CTGGCCGTCCTCGACCACACCGACGGATCGTGCCAGCTCGTCGCGAACATCTTCACCGGCGCCGGGGACCCGGCCGACCC GGCCGAAGCAGCGGACCTGGCTGGCCCAGGAGCGGCGGGCGGACCGTCCGCGCGGCGGGCGGAGCTGGACGCCGCCTACG ACGATGCGGTGCACCGCATCGAGGTGATGACGGCAGATCTCGGCAAGTGGAGTGAGCCGACCGTGGCGACCACAACCGGG GCGTCCACGGGCGTGCGCGACTTCGCCTCCGCAACCCCGCCCGGCGGCTTCCACGCTGCCGTCGAGCGGTCGATCGAGGA GATCCGGGCGGGGGAGTGCTTCCAGATCGTGGTCTCCCAGCGGTTCGAGCGCCCCACCACCGCTGACGCCCTCGACGTCT ACCGGGTCCTGCGGGCGTCGAACCCCAGCCCCTACATGTACCTGCTGCGGTTCGCCGATCATGATGTGGTCGGCTCGTCG CCGGAGGCGCACGTCAAGGTCACCGGCCGCCGGGCGTTGCTGCACCCGATCGCGGGCAGCCGGCCGAGGGGCGAGACCCC CGAGCGCGATGCCGAACTGGCTGCCCAGCTCCTGGCCGATCCGAAGGAACGGTCCGAGCACGTGATGCTGGTCGACCTGG TCCGCAATGATCTCGGGCGGGTCTGCGTGCCCGGATCGGTGCGGGTGGTCGAGTTCGCGTCCGTCGAGCGGTTCTCGCAC ATCATGCACATCGTCTCCACCGTGATCGGTGAGGTGGCGCCCGAGCGCAGCGCGGTCGACGTCCTCGCCGCGACCTTTCC CGCCGGGACGTTGTCGGGAGCGCCCAAGGTGCGGGCCATGGAGATCATCGACGAGCTCGAGCCGACGAGGCGCGGCCTGT ACGGCGGGGTCGTGGGATATCTCGATTTCGGCGGTGACCTCGACACCGCGATCGCCATCCGCACAGCGGTCCTCCGTTCA GGAATGGCCTACGTGCAGGCCGGCGCCGGGATCGTGGCGGACTCCGTTCCCGACACCGAGGATCTCGAGAGCCGGACGAA GGCCGCGGCGGTTCTCCGCGCGATCGAGGTGGCGGAGTCGCTCCGCCCGCCGGTATGA
Upstream 100 bases:
>100_bases GGCCCCTGCAGCCCCCGGCCGTGAACCCCACGCCGACGCCGACCTCCACGCCCATGTCCATGCCGGCAGCGGCGCCGGCG CCGACGACGGGAGCACCACG
Downstream 100 bases:
>100_bases CAGCGCCCGCCGACCTGCCCGCGCCCGCAGGAAGCCCCGCTCCCGGCGCCCGCCGGGAGCGGGCGCTCGCCATGGTCGCG TGCCTGGTCGGATCCGCCGT
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MTTGEITPSRAEFHELAARQPVVAVSRRLLADGETPVGVYRKLAGGPGTFLLESAEHGGVWSRYSFVGVRAAATLTERDG QAAWTDGTPPPGVPLDGDPLDVLRAVERQLCSARPSGTPPLLGGLVGYLSYDIVRRIERLPARATDDLGMPELRMLLTTD LAVLDHTDGSCQLVANIFTGAGDPADPAEAADLAGPGAAGGPSARRAELDAAYDDAVHRIEVMTADLGKWSEPTVATTTG ASTGVRDFASATPPGGFHAAVERSIEEIRAGECFQIVVSQRFERPTTADALDVYRVLRASNPSPYMYLLRFADHDVVGSS PEAHVKVTGRRALLHPIAGSRPRGETPERDAELAAQLLADPKERSEHVMLVDLVRNDLGRVCVPGSVRVVEFASVERFSH IMHIVSTVIGEVAPERSAVDVLAATFPAGTLSGAPKVRAMEIIDELEPTRRGLYGGVVGYLDFGGDLDTAIAIRTAVLRS GMAYVQAGAGIVADSVPDTEDLESRTKAAAVLRAIEVAESLRPPV
Sequences:
>Translated_525_residues MTTGEITPSRAEFHELAARQPVVAVSRRLLADGETPVGVYRKLAGGPGTFLLESAEHGGVWSRYSFVGVRAAATLTERDG QAAWTDGTPPPGVPLDGDPLDVLRAVERQLCSARPSGTPPLLGGLVGYLSYDIVRRIERLPARATDDLGMPELRMLLTTD LAVLDHTDGSCQLVANIFTGAGDPADPAEAADLAGPGAAGGPSARRAELDAAYDDAVHRIEVMTADLGKWSEPTVATTTG ASTGVRDFASATPPGGFHAAVERSIEEIRAGECFQIVVSQRFERPTTADALDVYRVLRASNPSPYMYLLRFADHDVVGSS PEAHVKVTGRRALLHPIAGSRPRGETPERDAELAAQLLADPKERSEHVMLVDLVRNDLGRVCVPGSVRVVEFASVERFSH IMHIVSTVIGEVAPERSAVDVLAATFPAGTLSGAPKVRAMEIIDELEPTRRGLYGGVVGYLDFGGDLDTAIAIRTAVLRS GMAYVQAGAGIVADSVPDTEDLESRTKAAAVLRAIEVAESLRPPV >Mature_524_residues TTGEITPSRAEFHELAARQPVVAVSRRLLADGETPVGVYRKLAGGPGTFLLESAEHGGVWSRYSFVGVRAAATLTERDGQ AAWTDGTPPPGVPLDGDPLDVLRAVERQLCSARPSGTPPLLGGLVGYLSYDIVRRIERLPARATDDLGMPELRMLLTTDL AVLDHTDGSCQLVANIFTGAGDPADPAEAADLAGPGAAGGPSARRAELDAAYDDAVHRIEVMTADLGKWSEPTVATTTGA STGVRDFASATPPGGFHAAVERSIEEIRAGECFQIVVSQRFERPTTADALDVYRVLRASNPSPYMYLLRFADHDVVGSSP EAHVKVTGRRALLHPIAGSRPRGETPERDAELAAQLLADPKERSEHVMLVDLVRNDLGRVCVPGSVRVVEFASVERFSHI MHIVSTVIGEVAPERSAVDVLAATFPAGTLSGAPKVRAMEIIDELEPTRRGLYGGVVGYLDFGGDLDTAIAIRTAVLRSG MAYVQAGAGIVADSVPDTEDLESRTKAAAVLRAIEVAESLRPPV
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=445, Percent_Identity=38.4269662921348, Blast_Score=254, Evalue=1e-68, Organism=Escherichia coli, GI1788114, Length=479, Percent_Identity=30.6889352818372, Blast_Score=228, Evalue=7e-61, Organism=Escherichia coli, GI1786809, Length=247, Percent_Identity=31.5789473684211, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI87082077, Length=261, Percent_Identity=23.7547892720307, Blast_Score=63, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6320935, Length=499, Percent_Identity=36.2725450901804, Blast_Score=281, Evalue=2e-76, Organism=Saccharomyces cerevisiae, GI6324361, Length=429, Percent_Identity=25.1748251748252, Blast_Score=108, Evalue=3e-24,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 55624; Mature: 55493
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGEITPSRAEFHELAARQPVVAVSRRLLADGETPVGVYRKLAGGPGTFLLESAEHGGV CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEECCCCCCC WSRYSFVGVRAAATLTERDGQAAWTDGTPPPGVPLDGDPLDVLRAVERQLCSARPSGTPP CHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCH LLGGLVGYLSYDIVRRIERLPARATDDLGMPELRMLLTTDLAVLDHTDGSCQLVANIFTG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHC AGDPADPAEAADLAGPGAAGGPSARRAELDAAYDDAVHRIEVMTADLGKWSEPTVATTTG CCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEECC ASTGVRDFASATPPGGFHAAVERSIEEIRAGECFQIVVSQRFERPTTADALDVYRVLRAS CCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC NPSPYMYLLRFADHDVVGSSPEAHVKVTGRRALLHPIAGSRPRGETPERDAELAAQLLAD CCCCEEEEEEECCCCCCCCCCCCEEEECCCHHEECCCCCCCCCCCCCCHHHHHHHHHHCC PKERSEHVMLVDLVRNDLGRVCVPGSVRVVEFASVERFSHIMHIVSTVIGEVAPERSAVD HHHHCCCEEEHHHHHHHCCCEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VLAATFPAGTLSGAPKVRAMEIIDELEPTRRGLYGGVVGYLDFGGDLDTAIAIRTAVLRS HHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCHHEEEECCCCHHHHHHHHHHHHHC GMAYVQAGAGIVADSVPDTEDLESRTKAAAVLRAIEVAESLRPPV CHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTGEITPSRAEFHELAARQPVVAVSRRLLADGETPVGVYRKLAGGPGTFLLESAEHGGV CCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEECCCCCCC WSRYSFVGVRAAATLTERDGQAAWTDGTPPPGVPLDGDPLDVLRAVERQLCSARPSGTPP CHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCH LLGGLVGYLSYDIVRRIERLPARATDDLGMPELRMLLTTDLAVLDHTDGSCQLVANIFTG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHC AGDPADPAEAADLAGPGAAGGPSARRAELDAAYDDAVHRIEVMTADLGKWSEPTVATTTG CCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEECC ASTGVRDFASATPPGGFHAAVERSIEEIRAGECFQIVVSQRFERPTTADALDVYRVLRAS CCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC NPSPYMYLLRFADHDVVGSSPEAHVKVTGRRALLHPIAGSRPRGETPERDAELAAQLLAD CCCCEEEEEEECCCCCCCCCCCCEEEECCCHHEECCCCCCCCCCCCCCHHHHHHHHHHCC PKERSEHVMLVDLVRNDLGRVCVPGSVRVVEFASVERFSHIMHIVSTVIGEVAPERSAVD HHHHCCCEEEHHHHHHHCCCEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VLAATFPAGTLSGAPKVRAMEIIDELEPTRRGLYGGVVGYLDFGGDLDTAIAIRTAVLRS HHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCHHEEEECCCCHHHHHHHHHHHHHC GMAYVQAGAGIVADSVPDTEDLESRTKAAAVLRAIEVAESLRPPV CHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA