Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is lnt [H]

Identifier: 158313704

GI number: 158313704

Start: 2243955

End: 2245592

Strand: Direct

Name: lnt [H]

Synonym: Franean1_1868

Alternate gene names: 158313704

Gene position: 2243955-2245592 (Clockwise)

Preceding gene: 158313701

Following gene: 158313707

Centisome position: 24.98

GC content: 73.69

Gene sequence:

>1638_bases
ATGGCCAGCAGCGCCGGCCGCCCCGTGTCCGTCGACGCGGGCGGGCATGTGCGGCTGGTGCCGACCCGGTGGTCCCGGTG
GCGGTACCGGGCGCTGTCCGCGTTGCTCGGGGCGGTGCCCGCCGTGGCGTTCCCCGCGCTGTCGGCATGGCCGGTCGGCT
TCGTCGGGATGGTGCCGGCAACCCTGGTGATCGTGGCGGCCACCGTCCCGCGGGAGGCGGCGATCCGTGCCTGGTGCGGC
GGTACCGGGTTCTTCCTGGCGACCTGCTATTGGCTGGTTCCGAACACCGGTCCGTTCATCGTCGTCCTCGGCCTGGCGCT
CGGCGTCACCTGGATGCTGTGGGGCGTCCTGGTCTGGACGGCGCTGCGCCCCCGGCTGCCCTCCCAACCGCCCGGGTACC
GCCGTCTCGCCTGGGCGCTGGTCGCCGTCCCGTCCGGCTGGGTGATCGGGGAGTTCGCCCGGTCGTGGGAGGGCTTCGGT
GGGCCGTGGGCGCTGCTCGGTGCCAGCCAGTGGAACGCCCGACCGTTTCTGCCGCTGGCCGCCGTCGGCGGGGTGTGGCT
GCTGAGCTTCCTGCTCGCCGCCGTCAACCTGCTGGTGGCTGCGGCGGTCATGCCGGGCCTGCGGCCGGGGCGGCGGCGAC
CGTGGCGGGCCGGCGTCGCGCTAGCAGCCGGCCTGCTCGTTGCCGTGATGGTGGCCGGTGCGGCGGCCGTGCCCACCCCG
GCCAACACCGGCACGCTCACCGTTGGTGGCGTCCAGCCAGGCGTCGTCCACGGTGCCGACGTGCGGTTCGCCGACGGTGA
GGCGGCCACCAGAAGCCTGGTCGGCGCCGGGGTCGACCTGGTGGTGTGGGGGGAGAGCAGCGTCGGGTTCGACCTCGTCG
ACGACCAGGCACGGCTGCGCCAGCTCGAGGATCTGTCCCGCATGCTCGGTGTCCCGGTCTTGGTCAACACCGATGCGCGG
CGTGCTGATGAGGTCGCCGGCCCCGACGATGGGGACGGGGGGATCTACAAGTCGGCAGTGCTGGTCGGACCGGACGGCCC
GCGCGGGCGGTACGACAAGATGCGGCTGGTGCCGTTCGGGGAGTACATCCCCCTGCGCCCCGTCTTCGGTTGGCTGACCG
CGGTGACCGAGGCAGCCGCCGAGAACCGCCGCAAGGGTGTCCGGCTTACCGTGCTCGCCGCGGGGAAACTGGACGGCAGG
ACGATCCGGCTCGGTCCGCTGGTCTGCTTCGAGTCGGCCTTCCCGGACATGACTCTCCGTCTGGCGAACGACGGCGCGGA
CGTGGTCGTCGTCCAGTCGGCCACCTCGACCTTCCAGGACAGCTGGGCACCCGATCAGCACGCCAGCCTCGCCGCGCTGC
GGGCGGTCGAGGCGGGACGGCCTGTCCTTCACGCCACGCTGACCGGCGTGTCCACCGCCTTCGACGCCTCCGGCCGGCAG
TTGTTCCGCCTGGGCAGGGACGGGCGCGGCGCCTATGTCGTAGACCTGCCGCTGACCAGCGCGACCGGCACCCCGTATGC
CCGCCTCGGCGACTGGGTGCCCCTCGGCTCGCTCGCCATCGTCGCGGCCGTCGCGCTCGATGCCGCGGTGCTGCGGGCGG
TCCGTCTGCACCGCGCCAGGCGCTCCACGACGGGGTGA

Upstream 100 bases:

>100_bases
GTCGGGCCAGGGCCGAGTGGTTCTCCGCCTTCGGCGAGCGGGAGTGGCCGGGCGGGCTCCTCCGGGCGCACGCCGCCGGG
CCCGGTAGCACCATCGAGAC

Downstream 100 bases:

>100_bases
TTCGGGGTGGCAGGGCGGGTAGGGGTACCGCAAATTTTAGTTCGCGCGGCTCCTGGTCAGGGAAGGGCCCACAGCCGTAT
TGTGTTGTCCTTGCTGCCGC

Product: apolipoprotein N-acyltransferase

Products: NA

Alternate protein names: ALP N-acyltransferase [H]

Number of amino acids: Translated: 545; Mature: 544

Protein sequence:

>545_residues
MASSAGRPVSVDAGGHVRLVPTRWSRWRYRALSALLGAVPAVAFPALSAWPVGFVGMVPATLVIVAATVPREAAIRAWCG
GTGFFLATCYWLVPNTGPFIVVLGLALGVTWMLWGVLVWTALRPRLPSQPPGYRRLAWALVAVPSGWVIGEFARSWEGFG
GPWALLGASQWNARPFLPLAAVGGVWLLSFLLAAVNLLVAAAVMPGLRPGRRRPWRAGVALAAGLLVAVMVAGAAAVPTP
ANTGTLTVGGVQPGVVHGADVRFADGEAATRSLVGAGVDLVVWGESSVGFDLVDDQARLRQLEDLSRMLGVPVLVNTDAR
RADEVAGPDDGDGGIYKSAVLVGPDGPRGRYDKMRLVPFGEYIPLRPVFGWLTAVTEAAAENRRKGVRLTVLAAGKLDGR
TIRLGPLVCFESAFPDMTLRLANDGADVVVVQSATSTFQDSWAPDQHASLAALRAVEAGRPVLHATLTGVSTAFDASGRQ
LFRLGRDGRGAYVVDLPLTSATGTPYARLGDWVPLGSLAIVAAVALDAAVLRAVRLHRARRSTTG

Sequences:

>Translated_545_residues
MASSAGRPVSVDAGGHVRLVPTRWSRWRYRALSALLGAVPAVAFPALSAWPVGFVGMVPATLVIVAATVPREAAIRAWCG
GTGFFLATCYWLVPNTGPFIVVLGLALGVTWMLWGVLVWTALRPRLPSQPPGYRRLAWALVAVPSGWVIGEFARSWEGFG
GPWALLGASQWNARPFLPLAAVGGVWLLSFLLAAVNLLVAAAVMPGLRPGRRRPWRAGVALAAGLLVAVMVAGAAAVPTP
ANTGTLTVGGVQPGVVHGADVRFADGEAATRSLVGAGVDLVVWGESSVGFDLVDDQARLRQLEDLSRMLGVPVLVNTDAR
RADEVAGPDDGDGGIYKSAVLVGPDGPRGRYDKMRLVPFGEYIPLRPVFGWLTAVTEAAAENRRKGVRLTVLAAGKLDGR
TIRLGPLVCFESAFPDMTLRLANDGADVVVVQSATSTFQDSWAPDQHASLAALRAVEAGRPVLHATLTGVSTAFDASGRQ
LFRLGRDGRGAYVVDLPLTSATGTPYARLGDWVPLGSLAIVAAVALDAAVLRAVRLHRARRSTTG
>Mature_544_residues
ASSAGRPVSVDAGGHVRLVPTRWSRWRYRALSALLGAVPAVAFPALSAWPVGFVGMVPATLVIVAATVPREAAIRAWCGG
TGFFLATCYWLVPNTGPFIVVLGLALGVTWMLWGVLVWTALRPRLPSQPPGYRRLAWALVAVPSGWVIGEFARSWEGFGG
PWALLGASQWNARPFLPLAAVGGVWLLSFLLAAVNLLVAAAVMPGLRPGRRRPWRAGVALAAGLLVAVMVAGAAAVPTPA
NTGTLTVGGVQPGVVHGADVRFADGEAATRSLVGAGVDLVVWGESSVGFDLVDDQARLRQLEDLSRMLGVPVLVNTDARR
ADEVAGPDDGDGGIYKSAVLVGPDGPRGRYDKMRLVPFGEYIPLRPVFGWLTAVTEAAAENRRKGVRLTVLAAGKLDGRT
IRLGPLVCFESAFPDMTLRLANDGADVVVVQSATSTFQDSWAPDQHASLAALRAVEAGRPVLHATLTGVSTAFDASGRQL
FRLGRDGRGAYVVDLPLTSATGTPYARLGDWVPLGSLAIVAAVALDAAVLRAVRLHRARRSTTG

Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]

COG id: COG0815

COG function: function code M; Apolipoprotein N-acyltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786878, Length=556, Percent_Identity=26.4388489208633, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004563
- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 57287; Mature: 57156

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: PS50263 CN_HYDROLASE ; PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSAGRPVSVDAGGHVRLVPTRWSRWRYRALSALLGAVPAVAFPALSAWPVGFVGMVPA
CCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
TLVIVAATVPREAAIRAWCGGTGFFLATCYWLVPNTGPFIVVLGLALGVTWMLWGVLVWT
HHHHHEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALRPRLPSQPPGYRRLAWALVAVPSGWVIGEFARSWEGFGGPWALLGASQWNARPFLPLA
HHCCCCCCCCCCHHHHHEEEEECCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHH
AVGGVWLLSFLLAAVNLLVAAAVMPGLRPGRRRPWRAGVALAAGLLVAVMVAGAAAVPTP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
ANTGTLTVGGVQPGVVHGADVRFADGEAATRSLVGAGVDLVVWGESSVGFDLVDDQARLR
CCCCEEEECCCCCCEEECCCEEECCCHHHHHHHHHCCCEEEEECCCCCCCEEECCHHHHH
QLEDLSRMLGVPVLVNTDARRADEVAGPDDGDGGIYKSAVLVGPDGPRGRYDKMRLVPFG
HHHHHHHHHCCCEEEECCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECC
EYIPLRPVFGWLTAVTEAAAENRRKGVRLTVLAAGKLDGRTIRLGPLVCFESAFPDMTLR
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECCEEEEHHCCCCEEEE
LANDGADVVVVQSATSTFQDSWAPDQHASLAALRAVEAGRPVLHATLTGVSTAFDASGRQ
EECCCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCHH
LFRLGRDGRGAYVVDLPLTSATGTPYARLGDWVPLGSLAIVAAVALDAAVLRAVRLHRAR
HHHHCCCCCCEEEEEEECCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSTTG
HCCCC
>Mature Secondary Structure 
ASSAGRPVSVDAGGHVRLVPTRWSRWRYRALSALLGAVPAVAFPALSAWPVGFVGMVPA
CCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
TLVIVAATVPREAAIRAWCGGTGFFLATCYWLVPNTGPFIVVLGLALGVTWMLWGVLVWT
HHHHHEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALRPRLPSQPPGYRRLAWALVAVPSGWVIGEFARSWEGFGGPWALLGASQWNARPFLPLA
HHCCCCCCCCCCHHHHHEEEEECCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHH
AVGGVWLLSFLLAAVNLLVAAAVMPGLRPGRRRPWRAGVALAAGLLVAVMVAGAAAVPTP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
ANTGTLTVGGVQPGVVHGADVRFADGEAATRSLVGAGVDLVVWGESSVGFDLVDDQARLR
CCCCEEEECCCCCCEEECCCEEECCCHHHHHHHHHCCCEEEEECCCCCCCEEECCHHHHH
QLEDLSRMLGVPVLVNTDARRADEVAGPDDGDGGIYKSAVLVGPDGPRGRYDKMRLVPFG
HHHHHHHHHCCCEEEECCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECC
EYIPLRPVFGWLTAVTEAAAENRRKGVRLTVLAAGKLDGRTIRLGPLVCFESAFPDMTLR
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECCEEEEHHCCCCEEEE
LANDGADVVVVQSATSTFQDSWAPDQHASLAALRAVEAGRPVLHATLTGVSTAFDASGRQ
EECCCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCHH
LFRLGRDGRGAYVVDLPLTSATGTPYARLGDWVPLGSLAIVAAVALDAAVLRAVRLHRAR
HHHHCCCCCCEEEEEEECCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSTTG
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA