| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313701
Identifier: 158313701
GI number: 158313701
Start: 2240931
End: 2241521
Strand: Direct
Name: 158313701
Synonym: Franean1_1865
Alternate gene names: NA
Gene position: 2240931-2241521 (Clockwise)
Preceding gene: 158313700
Following gene: 158313704
Centisome position: 24.95
GC content: 72.93
Gene sequence:
>591_bases GTGCGCCGCCGGTCTTCGAGGACGGGGAACCTCATGCCGTGTTTCCGCTGCAGTGCGCGACAGACCGACCCAGTCCGGGG CGCGAGCCCCTGGCAACGCGCGGTCGTCGGCGGCGAACAGGTCCTGGTCTGCCCGACCTGCCGCCCCTCCCCGGAGTGGG AGAAGATCCTTGACCGCTGCGACCGCTGCGCCTCGACCCACCTGGCGAAGGCCCTCGGCACGGTGTTCTGCCGGGCCTGC GGCGCGCGGAAATCCTCCGAACAGCAGCCCGCCGGGCGCTCGCCAGCCCCTGAACCGCCCTCATCGGCTCGCGAACCGTT CTCAGCCACGCCCGGACTGTCCTCACCCATCCCCGAACCGTCGCGGACCGCCTCCGACGTGCCAGAGACCACAACCGGTG CTCTGCGCCCGCCGGCCGCAGGCTCCGCCAAGGGCGTGCCAGCCGCCACAGACACTCCCAACGCCTCCGCGGGACGTCAT GGCGGGGAACCAGCCACGGAGGGGCCTGAGCGTGCCCTCAGCGGCGACCTCGCCGCCGATGTGGACGCAGCCCTCGCCCG CATGTTCGGGCGACCGCGCCCGGTTTCCTGA
Upstream 100 bases:
>100_bases GAGCGGCGGGCCGGGTCGCCTCGCCCGTCGGACCCCCGCGAGGTGTTCCCGTGCCAGGGAACACCTCGCGGGGGTCCCGG CGTGGCATGGCACGGGCGAC
Downstream 100 bases:
>100_bases CCCACGATCCGGGATCATCCGCTAACGTTGCGACCGGGCACGGTCACCTCACCGATCCGGCGATCGGCCGTGCCACCGGA CGGACGATGCCTGCGTAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MRRRSSRTGNLMPCFRCSARQTDPVRGASPWQRAVVGGEQVLVCPTCRPSPEWEKILDRCDRCASTHLAKALGTVFCRAC GARKSSEQQPAGRSPAPEPPSSAREPFSATPGLSSPIPEPSRTASDVPETTTGALRPPAAGSAKGVPAATDTPNASAGRH GGEPATEGPERALSGDLAADVDAALARMFGRPRPVS
Sequences:
>Translated_196_residues MRRRSSRTGNLMPCFRCSARQTDPVRGASPWQRAVVGGEQVLVCPTCRPSPEWEKILDRCDRCASTHLAKALGTVFCRAC GARKSSEQQPAGRSPAPEPPSSAREPFSATPGLSSPIPEPSRTASDVPETTTGALRPPAAGSAKGVPAATDTPNASAGRH GGEPATEGPERALSGDLAADVDAALARMFGRPRPVS >Mature_196_residues MRRRSSRTGNLMPCFRCSARQTDPVRGASPWQRAVVGGEQVLVCPTCRPSPEWEKILDRCDRCASTHLAKALGTVFCRAC GARKSSEQQPAGRSPAPEPPSSAREPFSATPGLSSPIPEPSRTASDVPETTTGALRPPAAGSAKGVPAATDTPNASAGRH GGEPATEGPERALSGDLAADVDAALARMFGRPRPVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20424; Mature: 20424
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRSSRTGNLMPCFRCSARQTDPVRGASPWQRAVVGGEQVLVCPTCRPSPEWEKILDRC CCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH DRCASTHLAKALGTVFCRACGARKSSEQQPAGRSPAPEPPSSAREPFSATPGLSSPIPEP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SRTASDVPETTTGALRPPAAGSAKGVPAATDTPNASAGRHGGEPATEGPERALSGDLAAD CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHH VDAALARMFGRPRPVS HHHHHHHHHCCCCCCC >Mature Secondary Structure MRRRSSRTGNLMPCFRCSARQTDPVRGASPWQRAVVGGEQVLVCPTCRPSPEWEKILDRC CCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH DRCASTHLAKALGTVFCRACGARKSSEQQPAGRSPAPEPPSSAREPFSATPGLSSPIPEP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SRTASDVPETTTGALRPPAAGSAKGVPAATDTPNASAGRHGGEPATEGPERALSGDLAAD CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHH VDAALARMFGRPRPVS HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA