| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313653
Identifier: 158313653
GI number: 158313653
Start: 2181112
End: 2182425
Strand: Direct
Name: 158313653
Synonym: Franean1_1817
Alternate gene names: NA
Gene position: 2181112-2182425 (Clockwise)
Preceding gene: 158313651
Following gene: 158313654
Centisome position: 24.28
GC content: 76.1
Gene sequence:
>1314_bases ATGAACGAGACGCTGCCCGTGGACGTGCGGGCCCAGGTCGTGGCCTACGCCGCCGAGACCCTGGCCGACATCGCCGAAGC GGTCGTCCCCCCGAGCCTGGTCGCCGTGCGCCGGTTCAAGCCGTCGCGCCGGTCCCGGCTGGGCGCCGTCCCGCTGGCGG CCGCGATCGAGCACGACGCGCAGTTCCGCGGCCGGGTGGCCGAATGGGTGCGCCGCACCCACCCCGATCTGGTCGCCGCG ATCACCGGGGAGGGCGGCCCGCCACCCGCCGCCCCACCCGCCCAGGTCGCGGCGGTCGCCTACATCCTCCGGCTCCCCGA CTGGGAGCAGTTCGTCGAGGAGGCGGCCCGCTCGTCCGAGCAGGCGGTCTCCACCGCGCGGCTCGTCGACGCCGAGCGCG AGATCGACCGCCTGCACCAGCAGATCGAAGCCGTCCGCCGGCTCGCCCGCACCGAGCAGGACCAGCTGCGCGGCCAGCTC GACCAGGCACGGGCCGAGGCGGAGGAGGCCCGCCGCCGGCTACGGTCCTCCGCGGACCGCGTCCGCCGCGCCGAGCTCGC CGCCCGGGAGGTGAGCCTCGCCGCCGAGGCCGCCCGGGACGCCGCGCTGGCCTCGGCCCGGGAGAGCGAGGCCGAGGTAC GGCGGCTGCGCGCGCGGGTCGGCGACCTCGAAGCCGCCGCCTCGCTGACCCGCCGCGACACCCGCGAGTCCCGCGGCCTG GACGAGGCGCGACTTCGGGTGCTGCTCGACACGCTGATGGCTGCGGCGAACGGGGTCCGGCGGGAGCTGGCGCTGCCGAC CACCGTCGCGCGGCCCGCCGACCTGGTTGGCCGCTCCGACAACGGAGCTGCCTTCGACCCGTTCTCCGCGGTCGGTGGCC GCGGGCGCTCCGCCGACGACCCGGCCATCATCGACGACGTCCTCGCCATCCCCGGCCTGCATCTGATCATCGACGGTTAC AACGTCACCAAACGCGGCTACGGCACCCTGACCCTCCAGGCCCAGCGGGCACGCCTGCTGGCCGGCCTGGGAGCCCTGGC CGGCCGCTCCCTCGACACCGAGGTCACCGTCGTCTTCGACGCGACGGCGGTGGTGGCCCGGCCGGTCGGGGTCGCGATGC CCCGCGGCGTGCGGGTCGTCTTCAGCCAGCCCGGCGAGCTGGCCGACGACGAAATTGGACGTCTCGTGCGTGCGGAACCC GTCGGCCGACCGGTGGCCGTCGTGACCTCCGACCGCGAGGTGGCGGAGAACTGCGCCTCACAGGGCGCCCGCACAGTCTC CTCGGACGCCCTCCTGGCCCGCCTCGACCGCTAG
Upstream 100 bases:
>100_bases TCGCTCCGGAGTCCCCCGTGCCAGTGGTAATGCCCCGACCACTCGGCCGGCCACGGGGAGTCAGCGTCCGCACCCCCGCC GGCCAGGCCGGGCCCGTCGC
Downstream 100 bases:
>100_bases CTCTCCGCCGGCCCCGACTCACTCAGCCGCCACGGTTCGTTGACGCTTGGGTGGCGCCGGGTATGGGGGACGGGGTTCGG GCGTCCGGAACTGTCGGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MNETLPVDVRAQVVAYAAETLADIAEAVVPPSLVAVRRFKPSRRSRLGAVPLAAAIEHDAQFRGRVAEWVRRTHPDLVAA ITGEGGPPPAAPPAQVAAVAYILRLPDWEQFVEEAARSSEQAVSTARLVDAEREIDRLHQQIEAVRRLARTEQDQLRGQL DQARAEAEEARRRLRSSADRVRRAELAAREVSLAAEAARDAALASARESEAEVRRLRARVGDLEAAASLTRRDTRESRGL DEARLRVLLDTLMAAANGVRRELALPTTVARPADLVGRSDNGAAFDPFSAVGGRGRSADDPAIIDDVLAIPGLHLIIDGY NVTKRGYGTLTLQAQRARLLAGLGALAGRSLDTEVTVVFDATAVVARPVGVAMPRGVRVVFSQPGELADDEIGRLVRAEP VGRPVAVVTSDREVAENCASQGARTVSSDALLARLDR
Sequences:
>Translated_437_residues MNETLPVDVRAQVVAYAAETLADIAEAVVPPSLVAVRRFKPSRRSRLGAVPLAAAIEHDAQFRGRVAEWVRRTHPDLVAA ITGEGGPPPAAPPAQVAAVAYILRLPDWEQFVEEAARSSEQAVSTARLVDAEREIDRLHQQIEAVRRLARTEQDQLRGQL DQARAEAEEARRRLRSSADRVRRAELAAREVSLAAEAARDAALASARESEAEVRRLRARVGDLEAAASLTRRDTRESRGL DEARLRVLLDTLMAAANGVRRELALPTTVARPADLVGRSDNGAAFDPFSAVGGRGRSADDPAIIDDVLAIPGLHLIIDGY NVTKRGYGTLTLQAQRARLLAGLGALAGRSLDTEVTVVFDATAVVARPVGVAMPRGVRVVFSQPGELADDEIGRLVRAEP VGRPVAVVTSDREVAENCASQGARTVSSDALLARLDR >Mature_437_residues MNETLPVDVRAQVVAYAAETLADIAEAVVPPSLVAVRRFKPSRRSRLGAVPLAAAIEHDAQFRGRVAEWVRRTHPDLVAA ITGEGGPPPAAPPAQVAAVAYILRLPDWEQFVEEAARSSEQAVSTARLVDAEREIDRLHQQIEAVRRLARTEQDQLRGQL DQARAEAEEARRRLRSSADRVRRAELAAREVSLAAEAARDAALASARESEAEVRRLRARVGDLEAAASLTRRDTRESRGL DEARLRVLLDTLMAAANGVRRELALPTTVARPADLVGRSDNGAAFDPFSAVGGRGRSADDPAIIDDVLAIPGLHLIIDGY NVTKRGYGTLTLQAQRARLLAGLGALAGRSLDTEVTVVFDATAVVARPVGVAMPRGVRVVFSQPGELADDEIGRLVRAEP VGRPVAVVTSDREVAENCASQGARTVSSDALLARLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46937; Mature: 46937
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNETLPVDVRAQVVAYAAETLADIAEAVVPPSLVAVRRFKPSRRSRLGAVPLAAAIEHDA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH QFRGRVAEWVRRTHPDLVAAITGEGGPPPAAPPAQVAAVAYILRLPDWEQFVEEAARSSE HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH QAVSTARLVDAEREIDRLHQQIEAVRRLARTEQDQLRGQLDQARAEAEEARRRLRSSADR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRRAELAAREVSLAAEAARDAALASARESEAEVRRLRARVGDLEAAASLTRRDTRESRGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC DEARLRVLLDTLMAAANGVRRELALPTTVARPADLVGRSDNGAAFDPFSAVGGRGRSADD HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCC PAIIDDVLAIPGLHLIIDGYNVTKRGYGTLTLQAQRARLLAGLGALAGRSLDTEVTVVFD CHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEE ATAVVARPVGVAMPRGVRVVFSQPGELADDEIGRLVRAEPVGRPVAVVTSDREVAENCAS HHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHH QGARTVSSDALLARLDR CCCCCCCHHHHHHHCCC >Mature Secondary Structure MNETLPVDVRAQVVAYAAETLADIAEAVVPPSLVAVRRFKPSRRSRLGAVPLAAAIEHDA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH QFRGRVAEWVRRTHPDLVAAITGEGGPPPAAPPAQVAAVAYILRLPDWEQFVEEAARSSE HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH QAVSTARLVDAEREIDRLHQQIEAVRRLARTEQDQLRGQLDQARAEAEEARRRLRSSADR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRRAELAAREVSLAAEAARDAALASARESEAEVRRLRARVGDLEAAASLTRRDTRESRGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC DEARLRVLLDTLMAAANGVRRELALPTTVARPADLVGRSDNGAAFDPFSAVGGRGRSADD HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCC PAIIDDVLAIPGLHLIIDGYNVTKRGYGTLTLQAQRARLLAGLGALAGRSLDTEVTVVFD CHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEE ATAVVARPVGVAMPRGVRVVFSQPGELADDEIGRLVRAEPVGRPVAVVTSDREVAENCAS HHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHH QGARTVSSDALLARLDR CCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA