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The map label for this gene is ctaF [H]

Identifier: 158313639

GI number: 158313639

Start: 2166373

End: 2166774

Strand: Direct

Name: ctaF [H]

Synonym: Franean1_1803

Alternate gene names: 158313639

Gene position: 2166373-2166774 (Clockwise)

Preceding gene: 158313638

Following gene: 158313642

Centisome position: 24.12

GC content: 66.42

Gene sequence:

>402_bases
ATGAAGGTAGAAGGCTTCATCTTCAACTTCTTCGGCTTCTTCGCCGGAGCGATGGCCCTGGTCTACTGGTTCTGGGCGAA
GGACCCGACCGGGACGGCGGCGCTCACCCTGTGCGCGGGCATGGGCTTCCTCGTCGGCGGCTATCTGGTCTTCACCGGCC
GGCGGATCGGCATGCGCCCGCAGGACCTGCCGGACGCGGAGGTCGCCGACGGTGTCGGGGAGCTCGGGCACTTCACCCCG
GGCAGCTACTACCCGTTCTTTCTCGCGGCGAGTGCCGCGGTGGCCGCGATGGGGCTGGCCTTCGGTATCTGGATGACCAT
CCTCGGCGCGGTCCTGACGTTCACCTTCGCCGTGTGCCTGGTGATGGAGAACTTCTGGAACCCGCCGATTCCCGAGGACT
GA

Upstream 100 bases:

>100_bases
GCATCCGCTCCGAGCGACCCGCGTTTGACCTGCACTACCCGGCGGTCGTCGGTAGGGCGGATTACCACGCCACACCGGAA
CTCGGTCAGGGAGCCGCGCG

Downstream 100 bases:

>100_bases
TCGGCACCACCGGTCCGCGCCGCCAACCGGCGGCGCGGACGCGTCAGGGGCCGCGGTTCCAGGCCATCACCTGGAATCGC
GGCCCCTGAGTCGTTTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome aa3 subunit 4; Cytochrome c oxidase polypeptide IV [H]

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKVEGFIFNFFGFFAGAMALVYWFWAKDPTGTAALTLCAGMGFLVGGYLVFTGRRIGMRPQDLPDAEVADGVGELGHFTP
GSYYPFFLAASAAVAAMGLAFGIWMTILGAVLTFTFAVCLVMENFWNPPIPED

Sequences:

>Translated_133_residues
MKVEGFIFNFFGFFAGAMALVYWFWAKDPTGTAALTLCAGMGFLVGGYLVFTGRRIGMRPQDLPDAEVADGVGELGHFTP
GSYYPFFLAASAAVAAMGLAFGIWMTILGAVLTFTFAVCLVMENFWNPPIPED
>Mature_133_residues
MKVEGFIFNFFGFFAGAMALVYWFWAKDPTGTAALTLCAGMGFLVGGYLVFTGRRIGMRPQDLPDAEVADGVGELGHFTP
GSYYPFFLAASAAVAAMGLAFGIWMTILGAVLTFTFAVCLVMENFWNPPIPED

Specific function: Part of cytochrome c oxidase, its function is unknown [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit CtaF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021050 [H]

Pfam domain/function: PF12270 Cyt_c_ox_IV [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 14373; Mature: 14373

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVEGFIFNFFGFFAGAMALVYWFWAKDPTGTAALTLCAGMGFLVGGYLVFTGRRIGMRP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QDLPDAEVADGVGELGHFTPGSYYPFFLAASAAVAAMGLAFGIWMTILGAVLTFTFAVCL
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMENFWNPPIPED
HHHHHCCCCCCCC
>Mature Secondary Structure
MKVEGFIFNFFGFFAGAMALVYWFWAKDPTGTAALTLCAGMGFLVGGYLVFTGRRIGMRP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QDLPDAEVADGVGELGHFTPGSYYPFFLAASAAVAAMGLAFGIWMTILGAVLTFTFAVCL
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMENFWNPPIPED
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA