| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is pyrG [H]
Identifier: 158313590
GI number: 158313590
Start: 2104159
End: 2106117
Strand: Direct
Name: pyrG [H]
Synonym: Franean1_1754
Alternate gene names: 158313590
Gene position: 2104159-2106117 (Clockwise)
Preceding gene: 158313589
Following gene: 158313591
Centisome position: 23.43
GC content: 72.43
Gene sequence:
>1959_bases GTGGCGCAGGCGCATGTGACCAAGCACGTGTTCGTGACGGGAGGTGTGGCGTCCAGTCTCGGTAAGGGACTGACGGCGTC CAGCCTCGGCCGTCTGCTCAAGGCCCGCGGTCTGCGGGTCACGATGCAGAAGCTCGACCCGTATCTGAATGTTGATCCGG GAACGATGAACCCGTTCCAGCACGGCGAGGTGTTCGTCACCAACGACGGCGCCGAGACCGACCTGGACATCGGGCACTAC GAACGCTTCCTCGACGTCGACCTCGACGGCAGCGCGAACGTGACCACCGGGCAGGTGTACTCGGCGGTCATCGCCCGCGA GCGGCGCGGCGGGTACCTCGGTGAGACGGTGCAGGTCGTCCCGCACATCACCGACGAGATCAAGGGCCGGATCCGCCGGC TGGCCACCGATTCGGTGGACGTGGTGATCACCGAGGTGGGTGGCACCGTCGGCGACATCGAGTCGCTGCCCTACCTGGAG GCGATCCGCCAGGTCCGGCACGAGGTCGGCCGGGACAACGCGCTGACGGTGCACGTCAGCCTCGTCCCGTACCTCGCGCC GTCGGGTGAGCTGAAGACCAAGCCGACCCAGCACTCGGTCGCGGCGCTGCGCAGCATCGGCCTGCAGCCGGACGCGGTGG TCTGCCGCTCCGACCGGCCGTTGCCCGACGCGCTCAAGCGCAAGATCGCCATGATGTGCGACGTCGACGACGAGGCGGTC GTCGGCGCACCGGACGCCGGCTCGATCTATGACATCCCGAAGGTGCTGCACAAGGAGGGCCTCGACGCCTACGTCGTGCG CCGGCTCGGCCTCAGCTTCCGGGACGTCGACTGGACGGAGTGGGACACCCTGCTCCGCCGTGTGCACCATCCCTCGAACA CCGCCACGGTGGCGATCGTCGGCAAGTACGTCGACCTGCCCGACGCCTACCTGTCGGTGACCGAGGCGCTGCGCGCCGGC GCGTTCGCCGTCGACGCCCGCGCGGACATCCGCTGGATCGGGTCGGACGAGTTCACCTCGCCCGCCGCCGCCGCGCACGC GCTGGAAGGCGTGGACGGGATCATCGTCCCGGGCGGGTTCGGGATCCGCGGCATCGAGGGCAAGATCGAGGCGCTGCGGC ACGCCCGCGAACACGGCATTCCCACGCTGGGGATCTGCCTGGGCCTGCAGTGCATGGTGATCGAGGCCGGCCGTTCGCTG GCCGGGCTGGCCGGGTCGAACTCCACCGAGTTCGACCCGGAGACCGCCCACCCGGTGATCTCCACGATGGCCGACCAGCA CGACGTGGTCGCCGGCAAACGGGATATGGGCGGCACGATGCGGCTCGGCCTGTACCCGTGCGCGCTGGGCGCGGGGACCG TCGCCCGCCGGGAGTACGGCGAGCCGGAGGTGCTCGAGCGCCACCGGCACCGCTACGAGGTCAACAACTCCTACCGGGAG CGGCTGACCGCCGCCGGGCTGGTGTTCTCCGGCACCTCGCCGGACGGCCGCCTGGTCGAGGTCGTCGAGCTGCCGGCCGA CGTCCACCCGTTCTACGTGGGGACGCAGGCGCACCCGGAGTTCCGGTCGCGGCCGACGCGCGCGCACCCGCTGTTCCGCG GGCTCGCCGCCGCTGCCGTGGCCCACGCCGACCGGCGCCGGGGCCGGCTGCCCGTCGACATCCCGGACGGTGGTGTCGCG GGCGGTGGTGTCGCGGGCGGCGGGCCCGCCGATGGTGACATGATCGGGTCGGGTGACGGTGACGCGGCCGGTGCGCGGGC GGGCAACGGTGCCCGGTCGGCAGGTGGGCGGGCCCGCCGGGGCCGCGCGGAGCAGAGCGCGGCGGCCGGCGCCGGCACGA CCGCCGGTGTCAGCGGTGCCGCGGGTACCGGTGGTGCCGTGGGTGCGGCATTGCCCGGTGGGTCCACGGGGCCGGCCGCG GCGGCCGGTGTGAGCGACGGAGAGCTGGTTTCCCCATGA
Upstream 100 bases:
>100_bases CGGCGGCGGGGCGGGGCGTCGGCCTGCTCGGCACGGTGTTACCGTGAAGACCCGTGGAGGCGCCGGGGCCGGACCGGCGG CGTGACCACGGGGGTTCCGC
Downstream 100 bases:
>100_bases GCGGTACCGCGCACACCTACGAGGTGGCGGACAGCTCCGTCGCCTACCGCGGGCGGGTCATCGCCGTTCGCCGTGACATG GTGCGGATGCCCGACGGCGA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 652; Mature: 651
Protein sequence:
>652_residues MAQAHVTKHVFVTGGVASSLGKGLTASSLGRLLKARGLRVTMQKLDPYLNVDPGTMNPFQHGEVFVTNDGAETDLDIGHY ERFLDVDLDGSANVTTGQVYSAVIARERRGGYLGETVQVVPHITDEIKGRIRRLATDSVDVVITEVGGTVGDIESLPYLE AIRQVRHEVGRDNALTVHVSLVPYLAPSGELKTKPTQHSVAALRSIGLQPDAVVCRSDRPLPDALKRKIAMMCDVDDEAV VGAPDAGSIYDIPKVLHKEGLDAYVVRRLGLSFRDVDWTEWDTLLRRVHHPSNTATVAIVGKYVDLPDAYLSVTEALRAG AFAVDARADIRWIGSDEFTSPAAAAHALEGVDGIIVPGGFGIRGIEGKIEALRHAREHGIPTLGICLGLQCMVIEAGRSL AGLAGSNSTEFDPETAHPVISTMADQHDVVAGKRDMGGTMRLGLYPCALGAGTVARREYGEPEVLERHRHRYEVNNSYRE RLTAAGLVFSGTSPDGRLVEVVELPADVHPFYVGTQAHPEFRSRPTRAHPLFRGLAAAAVAHADRRRGRLPVDIPDGGVA GGGVAGGGPADGDMIGSGDGDAAGARAGNGARSAGGRARRGRAEQSAAAGAGTTAGVSGAAGTGGAVGAALPGGSTGPAA AAGVSDGELVSP
Sequences:
>Translated_652_residues MAQAHVTKHVFVTGGVASSLGKGLTASSLGRLLKARGLRVTMQKLDPYLNVDPGTMNPFQHGEVFVTNDGAETDLDIGHY ERFLDVDLDGSANVTTGQVYSAVIARERRGGYLGETVQVVPHITDEIKGRIRRLATDSVDVVITEVGGTVGDIESLPYLE AIRQVRHEVGRDNALTVHVSLVPYLAPSGELKTKPTQHSVAALRSIGLQPDAVVCRSDRPLPDALKRKIAMMCDVDDEAV VGAPDAGSIYDIPKVLHKEGLDAYVVRRLGLSFRDVDWTEWDTLLRRVHHPSNTATVAIVGKYVDLPDAYLSVTEALRAG AFAVDARADIRWIGSDEFTSPAAAAHALEGVDGIIVPGGFGIRGIEGKIEALRHAREHGIPTLGICLGLQCMVIEAGRSL AGLAGSNSTEFDPETAHPVISTMADQHDVVAGKRDMGGTMRLGLYPCALGAGTVARREYGEPEVLERHRHRYEVNNSYRE RLTAAGLVFSGTSPDGRLVEVVELPADVHPFYVGTQAHPEFRSRPTRAHPLFRGLAAAAVAHADRRRGRLPVDIPDGGVA GGGVAGGGPADGDMIGSGDGDAAGARAGNGARSAGGRARRGRAEQSAAAGAGTTAGVSGAAGTGGAVGAALPGGSTGPAA AAGVSDGELVSP >Mature_651_residues AQAHVTKHVFVTGGVASSLGKGLTASSLGRLLKARGLRVTMQKLDPYLNVDPGTMNPFQHGEVFVTNDGAETDLDIGHYE RFLDVDLDGSANVTTGQVYSAVIARERRGGYLGETVQVVPHITDEIKGRIRRLATDSVDVVITEVGGTVGDIESLPYLEA IRQVRHEVGRDNALTVHVSLVPYLAPSGELKTKPTQHSVAALRSIGLQPDAVVCRSDRPLPDALKRKIAMMCDVDDEAVV GAPDAGSIYDIPKVLHKEGLDAYVVRRLGLSFRDVDWTEWDTLLRRVHHPSNTATVAIVGKYVDLPDAYLSVTEALRAGA FAVDARADIRWIGSDEFTSPAAAAHALEGVDGIIVPGGFGIRGIEGKIEALRHAREHGIPTLGICLGLQCMVIEAGRSLA GLAGSNSTEFDPETAHPVISTMADQHDVVAGKRDMGGTMRLGLYPCALGAGTVARREYGEPEVLERHRHRYEVNNSYRER LTAAGLVFSGTSPDGRLVEVVELPADVHPFYVGTQAHPEFRSRPTRAHPLFRGLAAAAVAHADRRRGRLPVDIPDGGVAG GGVAGGGPADGDMIGSGDGDAAGARAGNGARSAGGRARRGRAEQSAAAGAGTTAGVSGAAGTGGAVGAALPGGSTGPAAA AGVSDGELVSP
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=554, Percent_Identity=46.2093862815885, Blast_Score=488, Evalue=1e-138, Organism=Homo sapiens, GI28559085, Length=558, Percent_Identity=43.7275985663082, Blast_Score=470, Evalue=1e-132, Organism=Homo sapiens, GI28559083, Length=558, Percent_Identity=43.7275985663082, Blast_Score=470, Evalue=1e-132, Organism=Homo sapiens, GI221316689, Length=558, Percent_Identity=43.7275985663082, Blast_Score=470, Evalue=1e-132, Organism=Escherichia coli, GI1789142, Length=546, Percent_Identity=50.5494505494505, Blast_Score=553, Evalue=1e-158, Organism=Caenorhabditis elegans, GI25148299, Length=601, Percent_Identity=37.4376039933444, Blast_Score=387, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6322563, Length=570, Percent_Identity=44.7368421052632, Blast_Score=456, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6319432, Length=566, Percent_Identity=43.4628975265018, Blast_Score=441, Evalue=1e-124, Organism=Drosophila melanogaster, GI24664469, Length=554, Percent_Identity=46.3898916967509, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI21357815, Length=500, Percent_Identity=45, Blast_Score=402, Evalue=1e-112,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 68083; Mature: 67952
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAHVTKHVFVTGGVASSLGKGLTASSLGRLLKARGLRVTMQKLDPYLNVDPGTMNPFQ CCCCCEEEEEEEECCHHHHHCCCCCHHHHHHHHHHCCCEEEHHHCCCCEECCCCCCCCCC HGEVFVTNDGAETDLDIGHYERFLDVDLDGSANVTTGQVYSAVIARERRGGYLGETVQVV CCEEEEECCCCCCCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH PHITDEIKGRIRRLATDSVDVVITEVGGTVGDIESLPYLEAIRQVRHEVGRDNALTVHVS HHHHHHHHHHHHHHHCCCEEEEEEECCCCHHCHHCCHHHHHHHHHHHHHCCCCEEEEEEE LVPYLAPSGELKTKPTQHSVAALRSIGLQPDAVVCRSDRPLPDALKRKIAMMCDVDDEAV EEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCE VGAPDAGSIYDIPKVLHKEGLDAYVVRRLGLSFRDVDWTEWDTLLRRVHHPSNTATVAIV ECCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEE GKYVDLPDAYLSVTEALRAGAFAVDARADIRWIGSDEFTSPAAAAHALEGVDGIIVPGGF EEECCCCHHHHHHHHHHHCCCEEEECCCCEEECCCCCCCCHHHHHHHHHCCCEEEECCCC GIRGIEGKIEALRHAREHGIPTLGICLGLQCMVIEAGRSLAGLAGSNSTEFDPETAHPVI CCCCCCHHHHHHHHHHHHCCCEEHHHHCCEEEEEECCCCCEECCCCCCCCCCCCHHHHHH STMADQHDVVAGKRDMGGTMRLGLYPCALGAGTVARREYGEPEVLERHRHRYEVNNSYRE HHHCCCHHHHCCCCCCCCEEEEEEEEHHCCCCHHHHHHCCCHHHHHHHHHHHHCCHHHHH RLTAAGLVFSGTSPDGRLVEVVELPADVHPFYVGTQAHPEFRSRPTRAHPLFRGLAAAAV HHHHHCEEEECCCCCCCEEEEEECCCCCCCEEECCCCCHHHHCCCCHHHHHHHHHHHHHH AHADRRRGRLPVDIPDGGVAGGGVAGGGPADGDMIGSGDGDAAGARAGNGARSAGGRARR HHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHC GRAEQSAAAGAGTTAGVSGAAGTGGAVGAALPGGSTGPAAAAGVSDGELVSP CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC >Mature Secondary Structure AQAHVTKHVFVTGGVASSLGKGLTASSLGRLLKARGLRVTMQKLDPYLNVDPGTMNPFQ CCCCEEEEEEEECCHHHHHCCCCCHHHHHHHHHHCCCEEEHHHCCCCEECCCCCCCCCC HGEVFVTNDGAETDLDIGHYERFLDVDLDGSANVTTGQVYSAVIARERRGGYLGETVQVV CCEEEEECCCCCCCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH PHITDEIKGRIRRLATDSVDVVITEVGGTVGDIESLPYLEAIRQVRHEVGRDNALTVHVS HHHHHHHHHHHHHHHCCCEEEEEEECCCCHHCHHCCHHHHHHHHHHHHHCCCCEEEEEEE LVPYLAPSGELKTKPTQHSVAALRSIGLQPDAVVCRSDRPLPDALKRKIAMMCDVDDEAV EEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCE VGAPDAGSIYDIPKVLHKEGLDAYVVRRLGLSFRDVDWTEWDTLLRRVHHPSNTATVAIV ECCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEE GKYVDLPDAYLSVTEALRAGAFAVDARADIRWIGSDEFTSPAAAAHALEGVDGIIVPGGF EEECCCCHHHHHHHHHHHCCCEEEECCCCEEECCCCCCCCHHHHHHHHHCCCEEEECCCC GIRGIEGKIEALRHAREHGIPTLGICLGLQCMVIEAGRSLAGLAGSNSTEFDPETAHPVI CCCCCCHHHHHHHHHHHHCCCEEHHHHCCEEEEEECCCCCEECCCCCCCCCCCCHHHHHH STMADQHDVVAGKRDMGGTMRLGLYPCALGAGTVARREYGEPEVLERHRHRYEVNNSYRE HHHCCCHHHHCCCCCCCCEEEEEEEEHHCCCCHHHHHHCCCHHHHHHHHHHHHCCHHHHH RLTAAGLVFSGTSPDGRLVEVVELPADVHPFYVGTQAHPEFRSRPTRAHPLFRGLAAAAV HHHHHCEEEECCCCCCCEEEEEECCCCCCCEEECCCCCHHHHCCCCHHHHHHHHHHHHHH AHADRRRGRLPVDIPDGGVAGGGVAGGGPADGDMIGSGDGDAAGARAGNGARSAGGRARR HHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHC GRAEQSAAAGAGTTAGVSGAAGTGGAVGAALPGGSTGPAAAAGVSDGELVSP CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA