| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is argR [H]
Identifier: 158313578
GI number: 158313578
Start: 2082045
End: 2082614
Strand: Direct
Name: argR [H]
Synonym: Franean1_1742
Alternate gene names: 158313578
Gene position: 2082045-2082614 (Clockwise)
Preceding gene: 158313577
Following gene: 158313579
Centisome position: 23.18
GC content: 74.74
Gene sequence:
>570_bases ATGACCATCCGCTCGGCCGCGCCGCTGACGAAACACGCCCGGCAGGCCCGCCTCGCCGCGCTGATCGCGGCGCGGTCGGT ACGGTCGCAGGCGGAGCTCGCGCGTCTGCTTGCCGAGGAAGGTGTGCAGGTCACCCAGGCCACCCTGTCCCGCGATCTGG AGGACATCGGCGCGACGAAGGTCCGCGGGGCCAACGGTGCGCTCGTGTACTCGGTCGACGTGAACCTGGCGCCGGCCGAG ACGGTGCGCATCCCGCTGGCCCGGCTCTGCGAGGAGCTTCTCGTCTCGGCTGAGGCCAACGGCGACCTCGTCGTGCTGCG TACCCCGCCGGGGGCCGCGCAGCTGTTCGCCTCCGCGCTCGATCGGGCGGCCCTGCCGGAGGTGATGGGAACCATCGCCG GTGACGACACCGTCCTGGTGGTCTGCCGCGCGGGGCCCACCGGCCCCGGTGGGCCAGCGTTCGCCGGCCGGCTGCTGTCG CTGGCCGACGGCGTCGCACGGGTGGCGGTTCCACCCGGAACGGGCGGGCATCCCGGCATCGGGGCAGGTACCGGCGCGGG CGCCGGCTGA
Upstream 100 bases:
>100_bases CGCGTTCCGTGGTGTTCGACCAGGCGGAGAACCGGCTGCACGCGCAGAAGGCCCTGCTGTCGTTCCTGCTGGACGAGACC ACGGCGGGTGTCGGTTCCCG
Downstream 100 bases:
>100_bases GGACCAGGCGGGGCAGACCTCCCGTCCACCGGCGTCATGAACGACCACGTGAACCGAGAATCAACTAAGGAGTGACTCCG TGACCGAACGCGTCGTGCTT
Product: arginine repressor ArgR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTIRSAAPLTKHARQARLAALIAARSVRSQAELARLLAEEGVQVTQATLSRDLEDIGATKVRGANGALVYSVDVNLAPAE TVRIPLARLCEELLVSAEANGDLVVLRTPPGAAQLFASALDRAALPEVMGTIAGDDTVLVVCRAGPTGPGGPAFAGRLLS LADGVARVAVPPGTGGHPGIGAGTGAGAG
Sequences:
>Translated_189_residues MTIRSAAPLTKHARQARLAALIAARSVRSQAELARLLAEEGVQVTQATLSRDLEDIGATKVRGANGALVYSVDVNLAPAE TVRIPLARLCEELLVSAEANGDLVVLRTPPGAAQLFASALDRAALPEVMGTIAGDDTVLVVCRAGPTGPGGPAFAGRLLS LADGVARVAVPPGTGGHPGIGAGTGAGAG >Mature_188_residues TIRSAAPLTKHARQARLAALIAARSVRSQAELARLLAEEGVQVTQATLSRDLEDIGATKVRGANGALVYSVDVNLAPAET VRIPLARLCEELLVSAEANGDLVVLRTPPGAAQLFASALDRAALPEVMGTIAGDDTVLVVCRAGPTGPGGPAFAGRLLSL ADGVARVAVPPGTGGHPGIGAGTGAGAG
Specific function: Regulates arginine biosynthesis genes [H]
COG id: COG1438
COG function: function code K; Arginine repressor
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgR family [H]
Homologues:
Organism=Escherichia coli, GI1789633, Length=136, Percent_Identity=36.0294117647059, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001669 - InterPro: IPR020899 - InterPro: IPR020900 - InterPro: IPR011991 - ProDom: PD007402 [H]
Pfam domain/function: PF01316 Arg_repressor; PF02863 Arg_repressor_C [H]
EC number: NA
Molecular weight: Translated: 18896; Mature: 18765
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRSAAPLTKHARQARLAALIAARSVRSQAELARLLAEEGVQVTQATLSRDLEDIGATK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCE VRGANGALVYSVDVNLAPAETVRIPLARLCEELLVSAEANGDLVVLRTPPGAAQLFASAL EECCCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH DRAALPEVMGTIAGDDTVLVVCRAGPTGPGGPAFAGRLLSLADGVARVAVPPGTGGHPGI HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC GAGTGAGAG CCCCCCCCC >Mature Secondary Structure TIRSAAPLTKHARQARLAALIAARSVRSQAELARLLAEEGVQVTQATLSRDLEDIGATK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCE VRGANGALVYSVDVNLAPAETVRIPLARLCEELLVSAEANGDLVVLRTPPGAAQLFASAL EECCCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH DRAALPEVMGTIAGDDTVLVVCRAGPTGPGGPAFAGRLLSLADGVARVAVPPGTGGHPGI HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC GAGTGAGAG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA