| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313562
Identifier: 158313562
GI number: 158313562
Start: 2062633
End: 2064285
Strand: Direct
Name: 158313562
Synonym: Franean1_1726
Alternate gene names: NA
Gene position: 2062633-2064285 (Clockwise)
Preceding gene: 158313561
Following gene: 158313563
Centisome position: 22.96
GC content: 79.98
Gene sequence:
>1653_bases ATGCAGGTGACGGGCCACGGGTCTGAACGTGACGCGGGCGGTGGACCGTCCTCGCGCGATTCGGGCTCCGAGGGGTCCGA CTACCCGGGAGCGGGCCGCGACCCGTTCGGTGCCGAACCGGAGTCGGTGACGCCCGAGGCGGGCGGCGAGAGCGACTCCG GGGGCGACGCCCGCCCGGTCTCCCTGCTGGGCATGCGGATGTCGCAGGAGACCCAGCCCGGCCGGGCGACGGTCAGCCGC CGGCAGACCCGCAGCCGCCCGCGCCCGCCGCGGCCCGAGCCTGGGCGCGGCGCACCGCCGCCGACTCCGCCGGCCGTCCG GCGGACGCCCGCTTCGCCCGCTCCGGCCGGCCCGCCCGCGGTCCCTCCGCCCGCGGCCGCCCCACCTGACCGGCACCAGG CGCCCCCGCCCGACCGGCAGAAACCATCCGACCGGCAGGTGCCGCCGGGCGCGCCCGCTCCCGCGCCGTCATCCGGTCAG CAGGCCGTCCCGCCGCCTGCGCCGACGCCGGCCCAGCCGCCGCCGCTGGCGCCGTCCGCGGGCGGGTGGACGCCCGACGT CGGGACCGCCGCCACACCGCCCGGCGAGCGGCCCCCGGCCCAGTGGGAGCGCGCGGCGTCCTTCGGATCACTGCCCACCC TGCCGCCGTCGGTCCCGCTGCCGCCCGCTCCGCCGCCACCGCCATCCCCGGCACCACCACCACCGCCGCCGCCGCCGAAT CCGGCCCCTCGAGCACCCGTGCCGTCGCGAGCGGTGGAACGGGTGGCTCCGGCACCCGCCGTGCCCCGGCCGGCCGCGCC GCTGTCGGCCGCGTCCGAGACGCCCCGGCCGTCGGCCGAAGTCGTTCCCGCTACGGACCGGCGTCCGGCGGTACGCGCCC TGCGGGTCCTGGTCGGTGGATTCGGTGGCGGCTGCGGCCGCACGACGGTGGCGGCCGGCCTGGGCATGGCGCTCGCCGCG CGCGCCCACTCCCGCATCGCCGCCGTCGACGCCTGCCCGGACCAGTACGGCATGCTGACCCAGCGGGTCGGCCTGCGGCC GCGCCGGGTCGGGCTGCGCGAGCTGGCGGGGGCCCGGCCCCCCGTCGCGTCGCTGACCGAGCTGCGGCGCTACCTGGCCG CCGACGGTCCGGGCGGGCTCGAGGTGCTGCCCGGCGTGCACGATCTCACCGCGCCCGGCCTGGCCGGCGACGAGCTGGCC GCGGCCCTGGACCTGCTTGCCCGGTGGTTCCCGGTGGTCATCGCGGACGGGCCGTCGGGATGGAGTCAGCCGGTGCCGGC GACCCTGCTCGCGCGCAGTGATCTCGTTGTGGTCACCACCCGGGCCGGCGAGGCCGAACTGGCCGCGACGGACGACGCGC TCACCGCGCTCGGCGGGGCCGGCCGCCGCGACCTCGCAGCCTCGGCGCTTGTGGCCGTGGTCGAGACCTACCCCGCCCGG CTGACCCGCGCCGCCCGGCAGCGCCTGGACGACCTGGCCGGCCGCGCCCGTCTCGTGGTGGTCGTCCCGTTCGACCCGGC GCTGACGGACAGCCGTCCGTTCGCCTGGCGGAGCCTGCGCAAGCGCACCCGGGCCGCGTTCGACGATCTCGCCACGGCCG TCGACCCGGCGTCCGTGGCGGGTCCGGGCGGCCGTCCGCCGGGCACCGGCTGA
Upstream 100 bases:
>100_bases CATGGCGAGGTTCCGGTGCGACAGGTCGGAACCGGCGGTGGGCGGGGGGCTCACCACCGGTGCCGACCTTTCGGACGGTC GACACACATGAGGTGGGAAC
Downstream 100 bases:
>100_bases GCCGGCCGCGCGGGGTGAGGTCGGACCGGCCGAGCCGGCCCCGACCGCGCGGCCGTAGGCGCCGGACACCTGGCCGCTTA CCCCTCCAAAGGCGACGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MQVTGHGSERDAGGGPSSRDSGSEGSDYPGAGRDPFGAEPESVTPEAGGESDSGGDARPVSLLGMRMSQETQPGRATVSR RQTRSRPRPPRPEPGRGAPPPTPPAVRRTPASPAPAGPPAVPPPAAAPPDRHQAPPPDRQKPSDRQVPPGAPAPAPSSGQ QAVPPPAPTPAQPPPLAPSAGGWTPDVGTAATPPGERPPAQWERAASFGSLPTLPPSVPLPPAPPPPPSPAPPPPPPPPN PAPRAPVPSRAVERVAPAPAVPRPAAPLSAASETPRPSAEVVPATDRRPAVRALRVLVGGFGGGCGRTTVAAGLGMALAA RAHSRIAAVDACPDQYGMLTQRVGLRPRRVGLRELAGARPPVASLTELRRYLAADGPGGLEVLPGVHDLTAPGLAGDELA AALDLLARWFPVVIADGPSGWSQPVPATLLARSDLVVVTTRAGEAELAATDDALTALGGAGRRDLAASALVAVVETYPAR LTRAARQRLDDLAGRARLVVVVPFDPALTDSRPFAWRSLRKRTRAAFDDLATAVDPASVAGPGGRPPGTG
Sequences:
>Translated_550_residues MQVTGHGSERDAGGGPSSRDSGSEGSDYPGAGRDPFGAEPESVTPEAGGESDSGGDARPVSLLGMRMSQETQPGRATVSR RQTRSRPRPPRPEPGRGAPPPTPPAVRRTPASPAPAGPPAVPPPAAAPPDRHQAPPPDRQKPSDRQVPPGAPAPAPSSGQ QAVPPPAPTPAQPPPLAPSAGGWTPDVGTAATPPGERPPAQWERAASFGSLPTLPPSVPLPPAPPPPPSPAPPPPPPPPN PAPRAPVPSRAVERVAPAPAVPRPAAPLSAASETPRPSAEVVPATDRRPAVRALRVLVGGFGGGCGRTTVAAGLGMALAA RAHSRIAAVDACPDQYGMLTQRVGLRPRRVGLRELAGARPPVASLTELRRYLAADGPGGLEVLPGVHDLTAPGLAGDELA AALDLLARWFPVVIADGPSGWSQPVPATLLARSDLVVVTTRAGEAELAATDDALTALGGAGRRDLAASALVAVVETYPAR LTRAARQRLDDLAGRARLVVVVPFDPALTDSRPFAWRSLRKRTRAAFDDLATAVDPASVAGPGGRPPGTG >Mature_550_residues MQVTGHGSERDAGGGPSSRDSGSEGSDYPGAGRDPFGAEPESVTPEAGGESDSGGDARPVSLLGMRMSQETQPGRATVSR RQTRSRPRPPRPEPGRGAPPPTPPAVRRTPASPAPAGPPAVPPPAAAPPDRHQAPPPDRQKPSDRQVPPGAPAPAPSSGQ QAVPPPAPTPAQPPPLAPSAGGWTPDVGTAATPPGERPPAQWERAASFGSLPTLPPSVPLPPAPPPPPSPAPPPPPPPPN PAPRAPVPSRAVERVAPAPAVPRPAAPLSAASETPRPSAEVVPATDRRPAVRALRVLVGGFGGGCGRTTVAAGLGMALAA RAHSRIAAVDACPDQYGMLTQRVGLRPRRVGLRELAGARPPVASLTELRRYLAADGPGGLEVLPGVHDLTAPGLAGDELA AALDLLARWFPVVIADGPSGWSQPVPATLLARSDLVVVTTRAGEAELAATDDALTALGGAGRRDLAASALVAVVETYPAR LTRAARQRLDDLAGRARLVVVVPFDPALTDSRPFAWRSLRKRTRAAFDDLATAVDPASVAGPGGRPPGTG
Specific function: Unknown
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55809; Mature: 55809
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVTGHGSERDAGGGPSSRDSGSEGSDYPGAGRDPFGAEPESVTPEAGGESDSGGDARPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH SLLGMRMSQETQPGRATVSRRQTRSRPRPPRPEPGRGAPPPTPPAVRRTPASPAPAGPPA HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPPPAAAPPDRHQAPPPDRQKPSDRQVPPGAPAPAPSSGQQAVPPPAPTPAQPPPLAPSA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGWTPDVGTAATPPGERPPAQWERAASFGSLPTLPPSVPLPPAPPPPPSPAPPPPPPPPN CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAPRAPVPSRAVERVAPAPAVPRPAAPLSAASETPRPSAEVVPATDRRPAVRALRVLVGG CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC FGGGCGRTTVAAGLGMALAARAHSRIAAVDACPDQYGMLTQRVGLRPRRVGLRELAGARP CCCCCHHHHHHHHHHHHHHHHHHHHEEEHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC PVASLTELRRYLAADGPGGLEVLPGVHDLTAPGLAGDELAAALDLLARWFPVVIADGPSG CHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCEEEECCCCC WSQPVPATLLARSDLVVVTTRAGEAELAATDDALTALGGAGRRDLAASALVAVVETYPAR CCCCCCHHHEECCCEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LTRAARQRLDDLAGRARLVVVVPFDPALTDSRPFAWRSLRKRTRAAFDDLATAVDPASVA HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHC GPGGRPPGTG CCCCCCCCCC >Mature Secondary Structure MQVTGHGSERDAGGGPSSRDSGSEGSDYPGAGRDPFGAEPESVTPEAGGESDSGGDARPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH SLLGMRMSQETQPGRATVSRRQTRSRPRPPRPEPGRGAPPPTPPAVRRTPASPAPAGPPA HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPPPAAAPPDRHQAPPPDRQKPSDRQVPPGAPAPAPSSGQQAVPPPAPTPAQPPPLAPSA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGWTPDVGTAATPPGERPPAQWERAASFGSLPTLPPSVPLPPAPPPPPSPAPPPPPPPPN CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAPRAPVPSRAVERVAPAPAVPRPAAPLSAASETPRPSAEVVPATDRRPAVRALRVLVGG CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC FGGGCGRTTVAAGLGMALAARAHSRIAAVDACPDQYGMLTQRVGLRPRRVGLRELAGARP CCCCCHHHHHHHHHHHHHHHHHHHHEEEHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC PVASLTELRRYLAADGPGGLEVLPGVHDLTAPGLAGDELAAALDLLARWFPVVIADGPSG CHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCEEEECCCCC WSQPVPATLLARSDLVVVTTRAGEAELAATDDALTALGGAGRRDLAASALVAVVETYPAR CCCCCCHHHEECCCEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LTRAARQRLDDLAGRARLVVVVPFDPALTDSRPFAWRSLRKRTRAAFDDLATAVDPASVA HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHC GPGGRPPGTG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA