| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313529
Identifier: 158313529
GI number: 158313529
Start: 2024760
End: 2025110
Strand: Direct
Name: 158313529
Synonym: Franean1_1693
Alternate gene names: NA
Gene position: 2024760-2025110 (Clockwise)
Preceding gene: 158313528
Following gene: 158313530
Centisome position: 22.54
GC content: 74.07
Gene sequence:
>351_bases ATGGGGACGAGGATGTTCTACGTCGCCCTCGGCGCGGCCACCGGGGTGCTGGTGGTGCGCCAGGTCGCCCGCGCGGTCTC CTCGCTGTCGCCGACGGGTCTGGCCGGGTCTTTCGTACAGTCGGTGCGGGAGTTCGCCGCCGACGTCGGCGAGGCGATGG CCGAGCGGGAGGAGGAGATCCGCTCCGCGCTCGGCCTCGACGACGCGGACGGCTCCGGCGACGGCGAGCGTACAGGCGCC GCCACGAGCACCGGGGCTGCCGCGAGCGACCAGGACACCTCTGCCCCGGGTCCTGACGAGTTCGACCCGGAACGGACGAT GCGTCTGGTCCCCGGCGCGCGCCGGCCATGA
Upstream 100 bases:
>100_bases GAGTGTCGGCCGAGATGAAGGCGGAGAAGTCGCAGCGCCGGGCCGCGCGCCGCGCGCCCGAGGTCACCGCGTCCGGCGCG GGCGGCCGGGGTCGTCGCTG
Downstream 100 bases:
>100_bases CCTCCGACCGGTCACGGCCGATCCCGGGTACACGCCCGGCGTCGGCCGGGTGGCCGGGTGCCTTATCCCGACGACCCTGG ACGACGTGAACCGATGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MGTRMFYVALGAATGVLVVRQVARAVSSLSPTGLAGSFVQSVREFAADVGEAMAEREEEIRSALGLDDADGSGDGERTGA ATSTGAAASDQDTSAPGPDEFDPERTMRLVPGARRP
Sequences:
>Translated_116_residues MGTRMFYVALGAATGVLVVRQVARAVSSLSPTGLAGSFVQSVREFAADVGEAMAEREEEIRSALGLDDADGSGDGERTGA ATSTGAAASDQDTSAPGPDEFDPERTMRLVPGARRP >Mature_115_residues GTRMFYVALGAATGVLVVRQVARAVSSLSPTGLAGSFVQSVREFAADVGEAMAEREEEIRSALGLDDADGSGDGERTGAA TSTGAAASDQDTSAPGPDEFDPERTMRLVPGARRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11903; Mature: 11772
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTRMFYVALGAATGVLVVRQVARAVSSLSPTGLAGSFVQSVREFAADVGEAMAEREEEI CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RSALGLDDADGSGDGERTGAATSTGAAASDQDTSAPGPDEFDPERTMRLVPGARRP HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure GTRMFYVALGAATGVLVVRQVARAVSSLSPTGLAGSFVQSVREFAADVGEAMAEREEEI CCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RSALGLDDADGSGDGERTGAATSTGAAASDQDTSAPGPDEFDPERTMRLVPGARRP HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA