Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is ywzG [H]

Identifier: 158313477

GI number: 158313477

Start: 1957535

End: 1957927

Strand: Direct

Name: ywzG [H]

Synonym: Franean1_1641

Alternate gene names: 158313477

Gene position: 1957535-1957927 (Clockwise)

Preceding gene: 158313476

Following gene: 158313478

Centisome position: 21.79

GC content: 69.47

Gene sequence:

>393_bases
GTGAAGGTCGCCAAGGATCTGGTGGCCGCCTCGGCGACGCCGATCGTGCTCGGCATCCTGGCGGAGGAGGAGAGCTACGG
CTACGCGATCCTCAAGCGGATCAACGAGCTGTCCGGCGGCGAGCTGGACTGGACCGAGGGCCTGCTCTACCCGTTGCTGC
ACCGGCTTGAGCGCCTCGGTCATGTGGAGTCGAGCTGGCGGTCGGCCACCGGCGAGCGCCGGCGCAAGTACTACCGCATC
ACCGACACCGGCCTGGCTGAACTGGCCGAGCAGCGCCGTCAGTGGGACACGGTCGTGGACGCGCTCAAGGAGATCTGGAC
GGGCCTCGGCGACCGCGGCCCGCTGACGGCCATCCCAGCCATCCCGGCGATCCCAGTGGAGGGCCACGCATGA

Upstream 100 bases:

>100_bases
CGCGACGCTCCGAACACGGACGCGTGTCGCGCCCTGTTGTCTCCCAAGATTACCTAGCAGTACTATGCATGGAGCTTCTA
GGGTACCGAGGGGAGGTGTC

Downstream 100 bases:

>100_bases
CGGCACAGGAGGGCCAGCAGGCGCTGGAGGCACAGCAGCCGCTGGACGCGCTGGAGGCGCAGTTCGCGCAGTGGCGTCAC
TACGCGCAGCGCCGCCGGGA

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKVAKDLVAASATPIVLGILAEEESYGYAILKRINELSGGELDWTEGLLYPLLHRLERLGHVESSWRSATGERRRKYYRI
TDTGLAELAEQRRQWDTVVDALKEIWTGLGDRGPLTAIPAIPAIPVEGHA

Sequences:

>Translated_130_residues
MKVAKDLVAASATPIVLGILAEEESYGYAILKRINELSGGELDWTEGLLYPLLHRLERLGHVESSWRSATGERRRKYYRI
TDTGLAELAEQRRQWDTVVDALKEIWTGLGDRGPLTAIPAIPAIPVEGHA
>Mature_130_residues
MKVAKDLVAASATPIVLGILAEEESYGYAILKRINELSGGELDWTEGLLYPLLHRLERLGHVESSWRSATGERRRKYYRI
TDTGLAELAEQRRQWDTVVDALKEIWTGLGDRGPLTAIPAIPAIPVEGHA

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 14450; Mature: 14450

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAKDLVAASATPIVLGILAEEESYGYAILKRINELSGGELDWTEGLLYPLLHRLERLG
CCHHHHHHHHCCCHHHEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
HVESSWRSATGERRRKYYRITDTGLAELAEQRRQWDTVVDALKEIWTGLGDRGPLTAIPA
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
IPAIPVEGHA
CCCCCCCCCC
>Mature Secondary Structure
MKVAKDLVAASATPIVLGILAEEESYGYAILKRINELSGGELDWTEGLLYPLLHRLERLG
CCHHHHHHHHCCCHHHEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
HVESSWRSATGERRRKYYRITDTGLAELAEQRRQWDTVVDALKEIWTGLGDRGPLTAIPA
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
IPAIPVEGHA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]