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The map label for this gene is yngJ [H]

Identifier: 158313461

GI number: 158313461

Start: 1941207

End: 1942346

Strand: Direct

Name: yngJ [H]

Synonym: Franean1_1624

Alternate gene names: 158313461

Gene position: 1941207-1942346 (Clockwise)

Preceding gene: 158313460

Following gene: 158313462

Centisome position: 21.61

GC content: 71.93

Gene sequence:

>1140_bases
GTGCTGCTGGAGTTGGATCCCGATCAGGAAGTCCTGCGGGAGGCGACGGCTCGGTATCTGACCGACCGGGTGCCCACAGA
GACGATCCGGCGGCTGCGGAACGACGCCTCGGGGTTCGAGGCGGACTACTGGCGTGCCGGCGCCGAGCTCGGCTGGACGT
CCCTGCTGGTGTCCGAGGAGAATGGCGGCGGTTCTATCAGTGGGGCGGGCCTGGTCGACCTGACCGTGGCCGCGCACGAG
TTCGGGCTCCGGGCGGCGCCCGGACCGCTGGTGCCGACGAACGTCGTCGCGGCGGCGCTGAGCGCCGTCGGCGGCGCGGC
GCACGAGGCCGTCCTGGCGGGGCTGCTGGACGGCACGGCGATCGCCTCGTGGTGCTACGGCGAGCCCGCGCCGAACGATC
GTCTCGGCACGGTGGAGCTGACCTGCCGGGTGGACGGCGACGAGATCGTCCTCGACGGGGTCAAGCGCCCGGTCGAGTCG
GCGGGCGTGGCCCAGTTCCTGCTGGTCACGGGGCGCAGCGAGGCGGGTCTCACCCAGGTGCTCGTCCCGACCGACACGCC
GGGCCTGACGGTTGAGCCGCTGCGCACCGTCGACCTGACCCGCCGGTTCGCGACCGTCCGGTTCGACGGGGTGCGGGTGC
CGGCGAGCGCCCTGGTCGGTGAGCTCGGCGGGGCCGCGGAGCAGGTGGAGCGTCAGCTCCAGCTGGCCCTGGTGATCCTC
TGCGCGGAGAGCGTCGGCTCGATGCAGGCCGCGTTCGACATGACGGTGCAGTGGGCGTTCGAGCGCTACTCGTTCGGCCG
GCCGCTGGCCTCCTACCAGGAGCTCAAGCACCGGTTCGCGGACATGAAGTCGTGGCTGGAGGCGGCGCACGCCATCAGCG
ACACGGCGGCGAGCGCCGTCGGCGCGGAGTCGCCGGACGCCCCCGAGCTGGTCAGTGCCGCGAAGGCGTTCATCGGTGAG
TACGGAGTCGAGCTGCTCCAGGACTGCGTCCAGATCCACGGTGGGATCGGCGTGACCTTCGAGCACGATCTGCATCTTTT
CCTGCGCCGGGTCGTCCTCGACCGCGCGCTGTACGGCACCCCCGCCGAGCACCGGCAGCGGATCGCCGGCGTGGTCGAAC
ATCTCAAGGAGCGGGCATGA

Upstream 100 bases:

>100_bases
CTGTTGAAGTTCTGTCAAAAATCGCTATACGTTTTCAGTCTGACCTCTTGCGGTGCCAGGTGGCGCGCGAGGGCCTCAAG
CGTCGTGGAGGTAACAGACT

Downstream 100 bases:

>100_bases
GCACGGGCGACATCGAGGACGTCGAGACCTTCCGCCGCCGGGCGCGGGACTGGATCCGGGCCAACCTCGCGCCGCTCCCG
GCGGGCAGCGGGATCGGCGT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MLLELDPDQEVLREATARYLTDRVPTETIRRLRNDASGFEADYWRAGAELGWTSLLVSEENGGGSISGAGLVDLTVAAHE
FGLRAAPGPLVPTNVVAAALSAVGGAAHEAVLAGLLDGTAIASWCYGEPAPNDRLGTVELTCRVDGDEIVLDGVKRPVES
AGVAQFLLVTGRSEAGLTQVLVPTDTPGLTVEPLRTVDLTRRFATVRFDGVRVPASALVGELGGAAEQVERQLQLALVIL
CAESVGSMQAAFDMTVQWAFERYSFGRPLASYQELKHRFADMKSWLEAAHAISDTAASAVGAESPDAPELVSAAKAFIGE
YGVELLQDCVQIHGGIGVTFEHDLHLFLRRVVLDRALYGTPAEHRQRIAGVVEHLKERA

Sequences:

>Translated_379_residues
MLLELDPDQEVLREATARYLTDRVPTETIRRLRNDASGFEADYWRAGAELGWTSLLVSEENGGGSISGAGLVDLTVAAHE
FGLRAAPGPLVPTNVVAAALSAVGGAAHEAVLAGLLDGTAIASWCYGEPAPNDRLGTVELTCRVDGDEIVLDGVKRPVES
AGVAQFLLVTGRSEAGLTQVLVPTDTPGLTVEPLRTVDLTRRFATVRFDGVRVPASALVGELGGAAEQVERQLQLALVIL
CAESVGSMQAAFDMTVQWAFERYSFGRPLASYQELKHRFADMKSWLEAAHAISDTAASAVGAESPDAPELVSAAKAFIGE
YGVELLQDCVQIHGGIGVTFEHDLHLFLRRVVLDRALYGTPAEHRQRIAGVVEHLKERA
>Mature_379_residues
MLLELDPDQEVLREATARYLTDRVPTETIRRLRNDASGFEADYWRAGAELGWTSLLVSEENGGGSISGAGLVDLTVAAHE
FGLRAAPGPLVPTNVVAAALSAVGGAAHEAVLAGLLDGTAIASWCYGEPAPNDRLGTVELTCRVDGDEIVLDGVKRPVES
AGVAQFLLVTGRSEAGLTQVLVPTDTPGLTVEPLRTVDLTRRFATVRFDGVRVPASALVGELGGAAEQVERQLQLALVIL
CAESVGSMQAAFDMTVQWAFERYSFGRPLASYQELKHRFADMKSWLEAAHAISDTAASAVGAESPDAPELVSAAKAFIGE
YGVELLQDCVQIHGGIGVTFEHDLHLFLRRVVLDRALYGTPAEHRQRIAGVVEHLKERA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=237, Percent_Identity=28.6919831223629, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI7656849, Length=331, Percent_Identity=25.6797583081571, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI4557233, Length=261, Percent_Identity=27.5862068965517, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI4557231, Length=267, Percent_Identity=25.8426966292135, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI187960098, Length=268, Percent_Identity=26.4925373134328, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4501857, Length=353, Percent_Identity=20.3966005665722, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI226958412, Length=379, Percent_Identity=21.8997361477573, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI76496475, Length=383, Percent_Identity=24.8041775456919, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI4557235, Length=383, Percent_Identity=24.8041775456919, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI226958414, Length=342, Percent_Identity=22.2222222222222, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87081958, Length=370, Percent_Identity=24.0540540540541, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1786223, Length=324, Percent_Identity=22.8395061728395, Blast_Score=79, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17534899, Length=385, Percent_Identity=25.1948051948052, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17570075, Length=269, Percent_Identity=27.1375464684015, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17569725, Length=391, Percent_Identity=24.8081841432225, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17506239, Length=262, Percent_Identity=27.0992366412214, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17508101, Length=261, Percent_Identity=27.9693486590038, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17538396, Length=379, Percent_Identity=22.6912928759894, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17533517, Length=341, Percent_Identity=21.4076246334311, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71990804, Length=186, Percent_Identity=25.2688172043011, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI32563615, Length=161, Percent_Identity=27.9503105590062, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17505929, Length=273, Percent_Identity=25.2747252747253, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24646207, Length=358, Percent_Identity=25.9776536312849, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24666513, Length=383, Percent_Identity=23.2375979112272, Blast_Score=88, Evalue=8e-18,
Organism=Drosophila melanogaster, GI24660351, Length=271, Percent_Identity=26.1992619926199, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21355753, Length=373, Percent_Identity=23.8605898123324, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21356377, Length=346, Percent_Identity=24.8554913294798, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI281363737, Length=277, Percent_Identity=24.187725631769, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40474; Mature: 40474

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLELDPDQEVLREATARYLTDRVPTETIRRLRNDASGFEADYWRAGAELGWTSLLVSEE
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEEC
NGGGSISGAGLVDLTVAAHEFGLRAAPGPLVPTNVVAAALSAVGGAAHEAVLAGLLDGTA
CCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHH
IASWCYGEPAPNDRLGTVELTCRVDGDEIVLDGVKRPVESAGVAQFLLVTGRSEAGLTQV
HHHHHCCCCCCCCCCEEEEEEEEECCCCEEECHHHCCHHHCCHHEEHEEECCCCCCCEEE
LVPTDTPGLTVEPLRTVDLTRRFATVRFDGVRVPASALVGELGGAAEQVERQLQLALVIL
EEECCCCCCEECCHHHHHHHHHHHHEEECCEECCHHHHHHHHCCHHHHHHHHHHHHHHHH
CAESVGSMQAAFDMTVQWAFERYSFGRPLASYQELKHRFADMKSWLEAAHAISDTAASAV
HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAESPDAPELVSAAKAFIGEYGVELLQDCVQIHGGIGVTFEHDLHLFLRRVVLDRALYGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCC
PAEHRQRIAGVVEHLKERA
CHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLELDPDQEVLREATARYLTDRVPTETIRRLRNDASGFEADYWRAGAELGWTSLLVSEE
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEEC
NGGGSISGAGLVDLTVAAHEFGLRAAPGPLVPTNVVAAALSAVGGAAHEAVLAGLLDGTA
CCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHH
IASWCYGEPAPNDRLGTVELTCRVDGDEIVLDGVKRPVESAGVAQFLLVTGRSEAGLTQV
HHHHHCCCCCCCCCCEEEEEEEEECCCCEEECHHHCCHHHCCHHEEHEEECCCCCCCEEE
LVPTDTPGLTVEPLRTVDLTRRFATVRFDGVRVPASALVGELGGAAEQVERQLQLALVIL
EEECCCCCCEECCHHHHHHHHHHHHEEECCEECCHHHHHHHHCCHHHHHHHHHHHHHHHH
CAESVGSMQAAFDMTVQWAFERYSFGRPLASYQELKHRFADMKSWLEAAHAISDTAASAV
HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAESPDAPELVSAAKAFIGEYGVELLQDCVQIHGGIGVTFEHDLHLFLRRVVLDRALYGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCC
PAEHRQRIAGVVEHLKERA
CHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]