| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313448
Identifier: 158313448
GI number: 158313448
Start: 1928250
End: 1929587
Strand: Direct
Name: 158313448
Synonym: Franean1_1611
Alternate gene names: NA
Gene position: 1928250-1929587 (Clockwise)
Preceding gene: 158313447
Following gene: 158313449
Centisome position: 21.47
GC content: 77.13
Gene sequence:
>1338_bases ATGCCGCTCAGCCGCCGCCGCTTCCTCATCGCCTCCGGCGTCACCGGAGCCGGGGCCCTCGCCGCGGGCGCGGGGGTGCT CAGCTGGGACGCCCTGCACGGCGCCGCCGCCGACCGCCCGCTGGCCGCGGGCACCGGCGTGCTGGTCGTCGTCACCCTCT ACGGCGGCAACGACGGCCTGAACACCGTCATCCCCTTCCAGGACCCGGCCTACCGGCAGGCACGCGGCGACCTCGCGCCT GCCGAGCCGGACGTCCACCCGCTGGCCGACGGCCTCGCGCTCGCCCCGGCGCTCCCCGGGCTCGCCGGGCTGTGGAAGGA GGGCCGCCTCGCGGTCGTGCGGGGCGTCGGCTACCCGGAGCCGGATCACAGCCACTTCCGGTCGATGGCCATCTGGCAGA CGGCGTCACCGCGGACGGCGTCGACGTCCGGCTGGATCGGGCGCTGGCTCGACGCGCTGGCTGCCAAGAACGGCGCGACA GGCGGCGCGACGGGCGGTCCGGCAGGCGGTTCGACGGCCAGCCCGGCGGGTGGGCAGGCCGGCGGCGCCGATCCGCTGCG GGCGCTGGCGATCGGCCCCACGCTGCCGCCGCTGCTGGTCGGCGACCACACGGTGGGCTCGGCGGTACCCACCGGCGGCT TCGCCGCGCCCAGCGGTCGGCTGGGAGCCGACCTGCACGCGCTCTACCGCCCCGACCCGGCCGACAGCCCGCTGGCCGCC CGGGCCGCCGCATCCGGCGCGGACCTGTTCACCGTCGCCGGGGCGCTCGCCCCGGTGCTCGCCGACGCCCCGGAACGCGA CGCCGGCACCCAGGGCCAGCTCGACGGCGGGGATCCTGGGGCAGGCGGTGGCGATGGCGGCGAGCTCGGCGCCCAGCTCG ACGTGGTCGCCCGCGCCATAACCGCCGGGGTGCCCACCCGGGTGTACTCGGTGAGCCTGGGCGGCTTCGACACCCATGCC GCTGAAGACGGCACCCACACCCGCCTGCTCGGCCAGCTGGATGCCGCGCTGACCCGCTTCCACCGCTCCATGGCCGCCAC GCCCCGCGGGAGCGGGGTGACGACGATGGTCTACTCGGAGTTCGGCCGGCGGGTCGCCGCGAACGCCAGCGGCGGCACCG ACCACGGCACCGCCGGTCCCGTCCTGCTCCTGGGGCGGCCGGTGCGCGGCGGCTTCTTCGGCGACCAGCCCCCCCTCACC GACCTCGACGACGGCGACCTGCGGGTCACCACGGACTTCCGCTCGGTGTACGCGACGCTGCTGGAGCGCGTCCTGGGAAC GGAGGCGGGCACCGTGCTCGGGTCCGACGAGAGCTTCCCCCGCCTCGCGTTTCTCTGA
Upstream 100 bases:
>100_bases ACCTCGTCACCTGACGCGCCAGGCCCGTGCGCCCCGTCCGTTACCCGGAACGCCTCCGGGCCCAGGCCGATCCGAGGCCG ATCCGAAGGAAGAGAACGCC
Downstream 100 bases:
>100_bases CCATGTCCCAGTCCCGGCCCGTCCCGCGAGTGGCCCGCCGTCCGGCCGTCCCGCCCCCGGCCAGCCGGCTTCCGTTCCCG TGTCCGCACACTCACTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MPLSRRRFLIASGVTGAGALAAGAGVLSWDALHGAAADRPLAAGTGVLVVVTLYGGNDGLNTVIPFQDPAYRQARGDLAP AEPDVHPLADGLALAPALPGLAGLWKEGRLAVVRGVGYPEPDHSHFRSMAIWQTASPRTASTSGWIGRWLDALAAKNGAT GGATGGPAGGSTASPAGGQAGGADPLRALAIGPTLPPLLVGDHTVGSAVPTGGFAAPSGRLGADLHALYRPDPADSPLAA RAAASGADLFTVAGALAPVLADAPERDAGTQGQLDGGDPGAGGGDGGELGAQLDVVARAITAGVPTRVYSVSLGGFDTHA AEDGTHTRLLGQLDAALTRFHRSMAATPRGSGVTTMVYSEFGRRVAANASGGTDHGTAGPVLLLGRPVRGGFFGDQPPLT DLDDGDLRVTTDFRSVYATLLERVLGTEAGTVLGSDESFPRLAFL
Sequences:
>Translated_445_residues MPLSRRRFLIASGVTGAGALAAGAGVLSWDALHGAAADRPLAAGTGVLVVVTLYGGNDGLNTVIPFQDPAYRQARGDLAP AEPDVHPLADGLALAPALPGLAGLWKEGRLAVVRGVGYPEPDHSHFRSMAIWQTASPRTASTSGWIGRWLDALAAKNGAT GGATGGPAGGSTASPAGGQAGGADPLRALAIGPTLPPLLVGDHTVGSAVPTGGFAAPSGRLGADLHALYRPDPADSPLAA RAAASGADLFTVAGALAPVLADAPERDAGTQGQLDGGDPGAGGGDGGELGAQLDVVARAITAGVPTRVYSVSLGGFDTHA AEDGTHTRLLGQLDAALTRFHRSMAATPRGSGVTTMVYSEFGRRVAANASGGTDHGTAGPVLLLGRPVRGGFFGDQPPLT DLDDGDLRVTTDFRSVYATLLERVLGTEAGTVLGSDESFPRLAFL >Mature_444_residues PLSRRRFLIASGVTGAGALAAGAGVLSWDALHGAAADRPLAAGTGVLVVVTLYGGNDGLNTVIPFQDPAYRQARGDLAPA EPDVHPLADGLALAPALPGLAGLWKEGRLAVVRGVGYPEPDHSHFRSMAIWQTASPRTASTSGWIGRWLDALAAKNGATG GATGGPAGGSTASPAGGQAGGADPLRALAIGPTLPPLLVGDHTVGSAVPTGGFAAPSGRLGADLHALYRPDPADSPLAAR AAASGADLFTVAGALAPVLADAPERDAGTQGQLDGGDPGAGGGDGGELGAQLDVVARAITAGVPTRVYSVSLGGFDTHAA EDGTHTRLLGQLDAALTRFHRSMAATPRGSGVTTMVYSEFGRRVAANASGGTDHGTAGPVLLLGRPVRGGFFGDQPPLTD LDDGDLRVTTDFRSVYATLLERVLGTEAGTVLGSDESFPRLAFL
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44533; Mature: 44402
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSRRRFLIASGVTGAGALAAGAGVLSWDALHGAAADRPLAAGTGVLVVVTLYGGNDGL CCCCCCEEEEECCCCCCHHHHHCCCCEEHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCC NTVIPFQDPAYRQARGDLAPAEPDVHPLADGLALAPALPGLAGLWKEGRLAVVRGVGYPE CCEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCC PDHSHFRSMAIWQTASPRTASTSGWIGRWLDALAAKNGATGGATGGPAGGSTASPAGGQA CCHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GGADPLRALAIGPTLPPLLVGDHTVGSAVPTGGFAAPSGRLGADLHALYRPDPADSPLAA CCCCCHHEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHH RAAASGADLFTVAGALAPVLADAPERDAGTQGQLDGGDPGAGGGDGGELGAQLDVVARAI HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHH TAGVPTRVYSVSLGGFDTHAAEDGTHTRLLGQLDAALTRFHRSMAATPRGSGVTTMVYSE HCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHH FGRRVAANASGGTDHGTAGPVLLLGRPVRGGFFGDQPPLTDLDDGDLRVTTDFRSVYATL HCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHH LERVLGTEAGTVLGSDESFPRLAFL HHHHHCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure PLSRRRFLIASGVTGAGALAAGAGVLSWDALHGAAADRPLAAGTGVLVVVTLYGGNDGL CCCCCEEEEECCCCCCHHHHHCCCCEEHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCC NTVIPFQDPAYRQARGDLAPAEPDVHPLADGLALAPALPGLAGLWKEGRLAVVRGVGYPE CCEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCC PDHSHFRSMAIWQTASPRTASTSGWIGRWLDALAAKNGATGGATGGPAGGSTASPAGGQA CCHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GGADPLRALAIGPTLPPLLVGDHTVGSAVPTGGFAAPSGRLGADLHALYRPDPADSPLAA CCCCCHHEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHH RAAASGADLFTVAGALAPVLADAPERDAGTQGQLDGGDPGAGGGDGGELGAQLDVVARAI HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHH TAGVPTRVYSVSLGGFDTHAAEDGTHTRLLGQLDAALTRFHRSMAATPRGSGVTTMVYSE HCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHH FGRRVAANASGGTDHGTAGPVLLLGRPVRGGFFGDQPPLTDLDDGDLRVTTDFRSVYATL HCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHH LERVLGTEAGTVLGSDESFPRLAFL HHHHHCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA