| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158313435
Identifier: 158313435
GI number: 158313435
Start: 1910234
End: 1911016
Strand: Direct
Name: 158313435
Synonym: Franean1_1598
Alternate gene names: NA
Gene position: 1910234-1911016 (Clockwise)
Preceding gene: 158313429
Following gene: 158313436
Centisome position: 21.27
GC content: 71.65
Gene sequence:
>783_bases GTGCCCCCGGACTCGCCGCGCCGGTTCACGGCATGCGTAGATCGCCCACCGCCTGCGGCCTGTGGTTCGGAGTCGTCGCG GGCGCGGATCTTGACCGTTCGGTTGAGTGAACGCATACTCGCCCGAATGTCGAACGGCGGGAACGGCGGACCGGAACCGA AGGCACTCCCGATACCGGCGGACTGGGATGACGTCACTCCCGCCTGGATGACGGTGGCACTCGCCAGCCGGCACCCGGGC ACGGAGGTCGGTGAGGTCAGGCTGGTCCTCCGGGACGACGGCAACAACCGCCGTGCCCGGTTCGGTGTCACCTACAGTGC GGGCACCGGCCCGGCCACCGTGTTCTGCAAGGCGGAGGGCCTCGGCGAGCACCGGGTGCTGCACCGGAACAACGGAGACG CCCACATCGGCAACACCTACGTCCTGCCCGATGGCGAGGTCGGGTTCCTCGACTGGCAGGTGGCGCGGCGCGGCGGCTGG TCGCAGGACGTCGGCTACTTCCTGGTGGGCTCGCTGACGGTGACGGACCGGCGCGAGCACGAGGCCGACCTGGTCGCGGA GTACCTGGGGGCGCTGGAAGTGCCGGGGGAGCGGCGCCCGTCGCCGGAGGCCGGCTGGCTGTCCTACCGTGCCTCGGCGG CCTACGGTCTCGCGGTGTGGCTGTCTACGCTGGGAACCGACGGCTGGCAGCGCCGGGACGTCTCGCTCGCCCTCGCCGAG CGGTACGGGGCGGCGTTCGTCGAGCTGGAGACCGAGGCGGCGCTGGATCGCCTGAACCCCTGA
Upstream 100 bases:
>100_bases GTCCGGGTCCGTTCCGGATCCTATTGGGTTGGGACGGATGAGCCAAAGCATGTGGCCCGGCGGGTGAATGGTGCCGTCTG TCGCCCCGGGTTCACCGTCG
Downstream 100 bases:
>100_bases ACCCCTGAACCCCTGAACACCAGCGCCTCTGAGCACCCGCGCCGGCGGCGCCCGGTTGTTGCGGGCCATAAAAAAGTGAA CGTACACTTATCAGCTGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphotransferase Family Protein
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MPPDSPRRFTACVDRPPPAACGSESSRARILTVRLSERILARMSNGGNGGPEPKALPIPADWDDVTPAWMTVALASRHPG TEVGEVRLVLRDDGNNRRARFGVTYSAGTGPATVFCKAEGLGEHRVLHRNNGDAHIGNTYVLPDGEVGFLDWQVARRGGW SQDVGYFLVGSLTVTDRREHEADLVAEYLGALEVPGERRPSPEAGWLSYRASAAYGLAVWLSTLGTDGWQRRDVSLALAE RYGAAFVELETEAALDRLNP
Sequences:
>Translated_260_residues MPPDSPRRFTACVDRPPPAACGSESSRARILTVRLSERILARMSNGGNGGPEPKALPIPADWDDVTPAWMTVALASRHPG TEVGEVRLVLRDDGNNRRARFGVTYSAGTGPATVFCKAEGLGEHRVLHRNNGDAHIGNTYVLPDGEVGFLDWQVARRGGW SQDVGYFLVGSLTVTDRREHEADLVAEYLGALEVPGERRPSPEAGWLSYRASAAYGLAVWLSTLGTDGWQRRDVSLALAE RYGAAFVELETEAALDRLNP >Mature_259_residues PPDSPRRFTACVDRPPPAACGSESSRARILTVRLSERILARMSNGGNGGPEPKALPIPADWDDVTPAWMTVALASRHPGT EVGEVRLVLRDDGNNRRARFGVTYSAGTGPATVFCKAEGLGEHRVLHRNNGDAHIGNTYVLPDGEVGFLDWQVARRGGWS QDVGYFLVGSLTVTDRREHEADLVAEYLGALEVPGERRPSPEAGWLSYRASAAYGLAVWLSTLGTDGWQRRDVSLALAER YGAAFVELETEAALDRLNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28235; Mature: 28104
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPDSPRRFTACVDRPPPAACGSESSRARILTVRLSERILARMSNGGNGGPEPKALPIPA CCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCCCEECCCC DWDDVTPAWMTVALASRHPGTEVGEVRLVLRDDGNNRRARFGVTYSAGTGPATVFCKAEG CCCCCCHHHHHEEHHCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEECC LGEHRVLHRNNGDAHIGNTYVLPDGEVGFLDWQVARRGGWSQDVGYFLVGSLTVTDRREH CCCCEEEECCCCCCCCCCEEEECCCCEEEEEHHHHHCCCCCCCCCEEEEEEEEECCCCHH EADLVAEYLGALEVPGERRPSPEAGWLSYRASAAYGLAVWLSTLGTDGWQRRDVSLALAE HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCHHEEEHH RYGAAFVELETEAALDRLNP HCCEEEEEEEHHHHHHCCCC >Mature Secondary Structure PPDSPRRFTACVDRPPPAACGSESSRARILTVRLSERILARMSNGGNGGPEPKALPIPA CCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCCCEECCCC DWDDVTPAWMTVALASRHPGTEVGEVRLVLRDDGNNRRARFGVTYSAGTGPATVFCKAEG CCCCCCHHHHHEEHHCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEECC LGEHRVLHRNNGDAHIGNTYVLPDGEVGFLDWQVARRGGWSQDVGYFLVGSLTVTDRREH CCCCEEEECCCCCCCCCCEEEECCCCEEEEEHHHHHCCCCCCCCCEEEEEEEEECCCCHH EADLVAEYLGALEVPGERRPSPEAGWLSYRASAAYGLAVWLSTLGTDGWQRRDVSLALAE HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCHHEEEHH RYGAAFVELETEAALDRLNP HCCEEEEEEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA