| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313409
Identifier: 158313409
GI number: 158313409
Start: 1878282
End: 1878596
Strand: Direct
Name: 158313409
Synonym: Franean1_1572
Alternate gene names: NA
Gene position: 1878282-1878596 (Clockwise)
Preceding gene: 158313408
Following gene: 158313410
Centisome position: 20.91
GC content: 74.6
Gene sequence:
>315_bases ATGACCATGACGCTCGTCCGCACCCGCCCGCGGGACCGCGAGCTGGACCTGGAGTCCTTCTGCGCCGCCGCCCAGCTGCA CCCCGACCTCGTCCACAGGCTGGTGACGCTCGGCCTGCTCGACGCCGGGCCCGGGCCCGGCGTCGGCGGCCGCAGTGTCG TGCTCGCGGCGGGCGCGCTGGCGCGTGTCGGGCGTATCGAACGGCTGCGCCGCGACCTCGGGATCACCTACACCGCCACC GGGGTCGTGCTCGACCTGCTCGACCGGATCGACGAGCTCGAGCGGCTGCTGCGGCAACCCCAGCGGGGAAGGTGA
Upstream 100 bases:
>100_bases CGCACGCGCGGATCATGGTGCCGCCCAACCCCGCGGAACGGGAGACCGAGCTGTTCCGCGAGCTCGCCCGGGTCTCGTCC TTCAACCCCAGGGAGCGGTC
Downstream 100 bases:
>100_bases GCGCCATGCGCGCAGTCGTCTACCGGGAACCGTTCCAGGTGGCCGTGGCGGACGTCCCCGACCCGCGCGTCGAGCATCCG CAGGACGCGATCGTGCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MTMTLVRTRPRDRELDLESFCAAAQLHPDLVHRLVTLGLLDAGPGPGVGGRSVVLAAGALARVGRIERLRRDLGITYTAT GVVLDLLDRIDELERLLRQPQRGR
Sequences:
>Translated_104_residues MTMTLVRTRPRDRELDLESFCAAAQLHPDLVHRLVTLGLLDAGPGPGVGGRSVVLAAGALARVGRIERLRRDLGITYTAT GVVLDLLDRIDELERLLRQPQRGR >Mature_103_residues TMTLVRTRPRDRELDLESFCAAAQLHPDLVHRLVTLGLLDAGPGPGVGGRSVVLAAGALARVGRIERLRRDLGITYTATG VVLDLLDRIDELERLLRQPQRGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11435; Mature: 11303
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTLVRTRPRDRELDLESFCAAAQLHPDLVHRLVTLGLLDAGPGPGVGGRSVVLAAGAL CCEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ARVGRIERLRRDLGITYTATGVVLDLLDRIDELERLLRQPQRGR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TMTLVRTRPRDRELDLESFCAAAQLHPDLVHRLVTLGLLDAGPGPGVGGRSVVLAAGAL CEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ARVGRIERLRRDLGITYTATGVVLDLLDRIDELERLLRQPQRGR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA