| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yehL [H]
Identifier: 158313389
GI number: 158313389
Start: 1857201
End: 1858388
Strand: Direct
Name: yehL [H]
Synonym: Franean1_1552
Alternate gene names: 158313389
Gene position: 1857201-1858388 (Clockwise)
Preceding gene: 158313388
Following gene: 158313390
Centisome position: 20.68
GC content: 74.41
Gene sequence:
>1188_bases ATGACGACATCGACCCAGCCGCCCGCCGGGATCGCGCCCGAGACCACCGCCGTCCCGACGCGGCCGGTCGGTGCCGCCCC GCAGGGCTCCGGCGACCAGCTGCTGCGCCCGCACGCGGAGCAGGCGTTCGCCGCCGAGCTGGCCGCTCTCGCCGCGACCG ACCGGCGCCGCCGTCCGCCGTCCTGGCGGCTCTCGCCCTGGGCCGTCGTCACCTACGTGCTCGGCGGCACGCTGGAGGAC GGCACGGTGATCACACCCAAGTACATCGGCTCGCGGCGGCTCGTCGAGGTCGCCGTGGCCACCCTCGCGACCGACCGGGC GCTGCTGCTCCTCGGCAGCCCGGGCACGGCGAAGTCGTGGCTGTCCGAGCACCTCGCCGCCGCGATCTCCGGCGACTCGA CCCTGGTCGTGCAGGGCACGGCCGGCACGTCCGAGGACGCTGTCCGCTACGGCTGGAACTACGCGCGGCTCATCGCCGAG GGGCCGTCCAAGGACGCGATGGTGCCCTCGCCGGTGATGCGCGCGATGGCCGGGGGCTCGCTCGCCAGGGTCGAGGAGCT CACCCGGATGGGCGCCGAGGTACAGGACGCGCTGATCACCGTGCTGTCGGAGAAGACGCTGCCCGTCGCGGAGCTCGCCA GCGAGGTGCAGGCCGTCGCCGGGTTCAACATCATCGCCACCGCCAACGACCGGGACCGGGGCGTCAACGAGATGTCCTCG GCGCTGCGCCGGCGGTTCAACACCGTCGTGCTGCCGCTGCCGGCCACGGAGGACGTCGAGGTCGAGATCGTCAGCCGCCG CGTCGCCCAGCTGGGCCGCGCGCTGGACCTGCCGGCCGAGCCGCCGGCGGGCGCCGAGGTCCGCCGCGTCGTGCGGATCT TCCGCGAGCTGCGCTCCGGGGTCACCAGCGACGGCCGCACCACGGTGCGGACACCGTCGTCGACCCTGTCCACCGCCGAG GCGATCAGCGTGATCACGGGCGGGCTGACCCTGGCCGCCCACTTCGGCGACGGCAGGCTGTCGGCCGAGGACGTCGCCGC CGGGCTCGTCGGGGCCGTGGTCAAGGATCCCTCCACCGACCCCGTGGTCTGGCGGGAGTACCTCGAGGGCGTCGTGCGGG ACCGCGACGGTTGGAAGGACCTGTACCAGGCCTGCTGGGATCTCGACACGGAGGCGCGCGGCAGATGA
Upstream 100 bases:
>100_bases AGACGGTGTCCGGCTACCAGCGCCTCGCGGCCGTGCTCGCCCAGCGGCGAGCCCGCCGCGACACCCTGCTCTCCCGTTCG AGCTCGAAGAAAGGCTCGTC
Downstream 100 bases:
>100_bases GCGTCACCGTCCTGGGCATCCGCCACCACGGGCCGGGCTCCGCACGGGCGGTCGAGGCGGCGCTCGCCGAGCTCGACCCG GACCTCGTCCTCGTCGAGGG
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTTSTQPPAGIAPETTAVPTRPVGAAPQGSGDQLLRPHAEQAFAAELAALAATDRRRRPPSWRLSPWAVVTYVLGGTLED GTVITPKYIGSRRLVEVAVATLATDRALLLLGSPGTAKSWLSEHLAAAISGDSTLVVQGTAGTSEDAVRYGWNYARLIAE GPSKDAMVPSPVMRAMAGGSLARVEELTRMGAEVQDALITVLSEKTLPVAELASEVQAVAGFNIIATANDRDRGVNEMSS ALRRRFNTVVLPLPATEDVEVEIVSRRVAQLGRALDLPAEPPAGAEVRRVVRIFRELRSGVTSDGRTTVRTPSSTLSTAE AISVITGGLTLAAHFGDGRLSAEDVAAGLVGAVVKDPSTDPVVWREYLEGVVRDRDGWKDLYQACWDLDTEARGR
Sequences:
>Translated_395_residues MTTSTQPPAGIAPETTAVPTRPVGAAPQGSGDQLLRPHAEQAFAAELAALAATDRRRRPPSWRLSPWAVVTYVLGGTLED GTVITPKYIGSRRLVEVAVATLATDRALLLLGSPGTAKSWLSEHLAAAISGDSTLVVQGTAGTSEDAVRYGWNYARLIAE GPSKDAMVPSPVMRAMAGGSLARVEELTRMGAEVQDALITVLSEKTLPVAELASEVQAVAGFNIIATANDRDRGVNEMSS ALRRRFNTVVLPLPATEDVEVEIVSRRVAQLGRALDLPAEPPAGAEVRRVVRIFRELRSGVTSDGRTTVRTPSSTLSTAE AISVITGGLTLAAHFGDGRLSAEDVAAGLVGAVVKDPSTDPVVWREYLEGVVRDRDGWKDLYQACWDLDTEARGR >Mature_394_residues TTSTQPPAGIAPETTAVPTRPVGAAPQGSGDQLLRPHAEQAFAAELAALAATDRRRRPPSWRLSPWAVVTYVLGGTLEDG TVITPKYIGSRRLVEVAVATLATDRALLLLGSPGTAKSWLSEHLAAAISGDSTLVVQGTAGTSEDAVRYGWNYARLIAEG PSKDAMVPSPVMRAMAGGSLARVEELTRMGAEVQDALITVLSEKTLPVAELASEVQAVAGFNIIATANDRDRGVNEMSSA LRRRFNTVVLPLPATEDVEVEIVSRRVAQLGRALDLPAEPPAGAEVRRVVRIFRELRSGVTSDGRTTVRTPSSTLSTAEA ISVITGGLTLAAHFGDGRLSAEDVAAGLVGAVVKDPSTDPVVWREYLEGVVRDRDGWKDLYQACWDLDTEARGR
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082049, Length=365, Percent_Identity=41.6438356164384, Blast_Score=234, Evalue=6e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 [H]
Pfam domain/function: PF07728 AAA_5 [H]
EC number: NA
Molecular weight: Translated: 41876; Mature: 41745
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSTQPPAGIAPETTAVPTRPVGAAPQGSGDQLLRPHAEQAFAAELAALAATDRRRRPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCC SWRLSPWAVVTYVLGGTLEDGTVITPKYIGSRRLVEVAVATLATDRALLLLGSPGTAKSW CCCCCHHHHHHHHHCCCCCCCEEECHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCHHHH LSEHLAAAISGDSTLVVQGTAGTSEDAVRYGWNYARLIAEGPSKDAMVPSPVMRAMAGGS HHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCC LARVEELTRMGAEVQDALITVLSEKTLPVAELASEVQAVAGFNIIATANDRDRGVNEMSS HHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCHHCCHHHHHH ALRRRFNTVVLPLPATEDVEVEIVSRRVAQLGRALDLPAEPPAGAEVRRVVRIFRELRSG HHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC VTSDGRTTVRTPSSTLSTAEAISVITGGLTLAAHFGDGRLSAEDVAAGLVGAVVKDPSTD CCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC PVVWREYLEGVVRDRDGWKDLYQACWDLDTEARGR HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TTSTQPPAGIAPETTAVPTRPVGAAPQGSGDQLLRPHAEQAFAAELAALAATDRRRRPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCC SWRLSPWAVVTYVLGGTLEDGTVITPKYIGSRRLVEVAVATLATDRALLLLGSPGTAKSW CCCCCHHHHHHHHHCCCCCCCEEECHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCHHHH LSEHLAAAISGDSTLVVQGTAGTSEDAVRYGWNYARLIAEGPSKDAMVPSPVMRAMAGGS HHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCC LARVEELTRMGAEVQDALITVLSEKTLPVAELASEVQAVAGFNIIATANDRDRGVNEMSS HHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCHHCCHHHHHH ALRRRFNTVVLPLPATEDVEVEIVSRRVAQLGRALDLPAEPPAGAEVRRVVRIFRELRSG HHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC VTSDGRTTVRTPSSTLSTAEAISVITGGLTLAAHFGDGRLSAEDVAAGLVGAVVKDPSTD CCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC PVVWREYLEGVVRDRDGWKDLYQACWDLDTEARGR HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]