| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313362
Identifier: 158313362
GI number: 158313362
Start: 1826829
End: 1827245
Strand: Direct
Name: 158313362
Synonym: Franean1_1524
Alternate gene names: NA
Gene position: 1826829-1827245 (Clockwise)
Preceding gene: 158313360
Following gene: 158313365
Centisome position: 20.34
GC content: 67.87
Gene sequence:
>417_bases ATGCCGAGTATCCAGCCCCCCGACCATGGCCCATGGCGCAACCCCTTCGACGGACACCGCTTCGTCGCCGTACGCCGGAC CGAACGCGGCCTGTACGAACTCACCCTCACCCCGGGCGCAGATCTTCACGACCTGATCAACGTGACTGCGACCCTGCCCA GCGTCGTCTACCTCGACCACCGACCCGCCGAGCCGACCGACCCCACCGTCATCCTGACGTTCGGCCCCACCCCAACCCCC GCAGGCAGACCAACGATCCGCCCCGGCATCGATGGCCCGGCCGGATGGACACCCACTCTCGACACCACCGAGGACCCCCC GACCCTCACCGAAGCTGACTTCCGGACCGTCCTCGACGCGCGTATCTACCGGCTGTACGGACGCCACCTCAGCGACATCA CACGCACCACGCAGTAG
Upstream 100 bases:
>100_bases GCCTACTCCAACAGTGATCCGTAAGCGGTCCGGATTCGGTGATGCCACACCGCCTCCGGACCTGGATCACATCCCTGCCT CAGACAGGAGACGCGACCCT
Downstream 100 bases:
>100_bases TCCTTCCGGACGGAAAGGGGCGCCCCGCCGGGGCGCCCCTTTTCACGTCTTCGGACAACGGCCGGTACTACGAACGCTCG CCCCGCTACGGCTGCACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MPSIQPPDHGPWRNPFDGHRFVAVRRTERGLYELTLTPGADLHDLINVTATLPSVVYLDHRPAEPTDPTVILTFGPTPTP AGRPTIRPGIDGPAGWTPTLDTTEDPPTLTEADFRTVLDARIYRLYGRHLSDITRTTQ
Sequences:
>Translated_138_residues MPSIQPPDHGPWRNPFDGHRFVAVRRTERGLYELTLTPGADLHDLINVTATLPSVVYLDHRPAEPTDPTVILTFGPTPTP AGRPTIRPGIDGPAGWTPTLDTTEDPPTLTEADFRTVLDARIYRLYGRHLSDITRTTQ >Mature_137_residues PSIQPPDHGPWRNPFDGHRFVAVRRTERGLYELTLTPGADLHDLINVTATLPSVVYLDHRPAEPTDPTVILTFGPTPTPA GRPTIRPGIDGPAGWTPTLDTTEDPPTLTEADFRTVLDARIYRLYGRHLSDITRTTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15316; Mature: 15185
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSIQPPDHGPWRNPFDGHRFVAVRRTERGLYELTLTPGADLHDLINVTATLPSVVYLDH CCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECC RPAEPTDPTVILTFGPTPTPAGRPTIRPGIDGPAGWTPTLDTTEDPPTLTEADFRTVLDA CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH RIYRLYGRHLSDITRTTQ HHHHHHHHHHHHHHHCCC >Mature Secondary Structure PSIQPPDHGPWRNPFDGHRFVAVRRTERGLYELTLTPGADLHDLINVTATLPSVVYLDH CCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECC RPAEPTDPTVILTFGPTPTPAGRPTIRPGIDGPAGWTPTLDTTEDPPTLTEADFRTVLDA CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH RIYRLYGRHLSDITRTTQ HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA