| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313360
Identifier: 158313360
GI number: 158313360
Start: 1825834
End: 1826403
Strand: Direct
Name: 158313360
Synonym: Franean1_1522
Alternate gene names: NA
Gene position: 1825834-1826403 (Clockwise)
Preceding gene: 158313355
Following gene: 158313362
Centisome position: 20.33
GC content: 63.51
Gene sequence:
>570_bases ATGGCGAAGTCGAAGCGTCACGCCCGAAGCGACCCCTCGGGATTGATCAAGCTCCTGGATGATCTTCTGGCTACGGGTGC TCAGCACCCCGAGGACATCATCAACAGCGCGCCGGAACTCATCGACCGGATGCGCCCCGGAGAACCGCGCGACCTGTACC AGCGGGCACGCGAGACACAGCGCATCCTCGTGGCCACCATCGACGCACTCGAAAGGCCACGCTCCGACGCGCTCAGAGCC CTCTACAGCCTTGATCCAGTCCCACGGGGACACAAACTGCTGCTCAACCAGACGGAGCGCAGAGAGAAGGCCGGAGTCGT CTACCGCGTGAGTGGCGAGACGATGCGACGCCACATGGAGAGCCGTCTCCTGCTCGCGCTCGCGGTCGAGCTGGACCACC GTCTCACCAGGGGTGTTGGCACCACCCACTCAGTGATCAGCGCGATCATCAAACTGCCCCACCAACTACCACCACCACCC ATGGAGTTCTACCGCCGCGCACGGGAACGACGGGGTACCCGCACCCCAAGATCACAAAAGGTGACGGAACATCCTCGGAG CCAGGAGTGA
Upstream 100 bases:
>100_bases ACCGTGTTTAGTCACGGATACGTCGCTCACTGTGAGTGAAAGGGGGGCGGGTCTCCGCAGGCGGGCTCTGCCCTCTCCTG TCCGGAGCGCCCTGGAATGT
Downstream 100 bases:
>100_bases GAACTTGATCCCGATGCGTGCCGTGGGCGCTGCTACCCAGGCGGGTAGCAGCGCCCACGGCACTCCCATGCCTGCACCTA GGGAGCTTCCTCAGGTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MAKSKRHARSDPSGLIKLLDDLLATGAQHPEDIINSAPELIDRMRPGEPRDLYQRARETQRILVATIDALERPRSDALRA LYSLDPVPRGHKLLLNQTERREKAGVVYRVSGETMRRHMESRLLLALAVELDHRLTRGVGTTHSVISAIIKLPHQLPPPP MEFYRRARERRGTRTPRSQKVTEHPRSQE
Sequences:
>Translated_189_residues MAKSKRHARSDPSGLIKLLDDLLATGAQHPEDIINSAPELIDRMRPGEPRDLYQRARETQRILVATIDALERPRSDALRA LYSLDPVPRGHKLLLNQTERREKAGVVYRVSGETMRRHMESRLLLALAVELDHRLTRGVGTTHSVISAIIKLPHQLPPPP MEFYRRARERRGTRTPRSQKVTEHPRSQE >Mature_188_residues AKSKRHARSDPSGLIKLLDDLLATGAQHPEDIINSAPELIDRMRPGEPRDLYQRARETQRILVATIDALERPRSDALRAL YSLDPVPRGHKLLLNQTERREKAGVVYRVSGETMRRHMESRLLLALAVELDHRLTRGVGTTHSVISAIIKLPHQLPPPPM EFYRRARERRGTRTPRSQKVTEHPRSQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21632; Mature: 21501
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSKRHARSDPSGLIKLLDDLLATGAQHPEDIINSAPELIDRMRPGEPRDLYQRARETQ CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RILVATIDALERPRSDALRALYSLDPVPRGHKLLLNQTERREKAGVVYRVSGETMRRHME HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHH SRLLLALAVELDHRLTRGVGTTHSVISAIIKLPHQLPPPPMEFYRRARERRGTRTPRSQK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCH VTEHPRSQE HHCCCCCCC >Mature Secondary Structure AKSKRHARSDPSGLIKLLDDLLATGAQHPEDIINSAPELIDRMRPGEPRDLYQRARETQ CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RILVATIDALERPRSDALRALYSLDPVPRGHKLLLNQTERREKAGVVYRVSGETMRRHME HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHH SRLLLALAVELDHRLTRGVGTTHSVISAIIKLPHQLPPPPMEFYRRARERRGTRTPRSQK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCH VTEHPRSQE HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA