| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313300
Identifier: 158313300
GI number: 158313300
Start: 1759023
End: 1759298
Strand: Direct
Name: 158313300
Synonym: Franean1_1462
Alternate gene names: NA
Gene position: 1759023-1759298 (Clockwise)
Preceding gene: 158313299
Following gene: 158313303
Centisome position: 19.58
GC content: 67.03
Gene sequence:
>276_bases GTGGCCGAGGACGCGCGGCACTACAACGGACGACGACTCCACCGCGGGCCGCGTCCGGCTGTGCTCGGTCCACGCCTTGA TGTCGTCCGCCGACCATGCCCAGATGTTCCCGATCTTCTGCTTCGGCGCCGGGTACCCACCGGTGCTGCGGCCGTCCTGT GGTTGATCAATGGTGTTGCGGTGAAGGTGGTCGGCGACACGGATTCGGTGTCGCTGGTGAAGGGGCCGGCACGGTGGTTA CTCTCGCCGCGTTGTCCTTCGAACCGGCGACGCTGA
Upstream 100 bases:
>100_bases ATCCAGACCTTCCCGCCCGCGATCAACCCGGACAAACAAGCGGTACTCGACACCCTCCACGCGGCGGCCGTCACGCACTA AGCCGATTGAGCCAACTCAG
Downstream 100 bases:
>100_bases CCCGGCCACTGTCCGGCAGATCGGTGGCCGGGTCTCCCTGCTCAGCCGCTGATCGGCGGGGTTGAGCGGCGACACGGTCG GCGGTGGCGTTCAGTTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MAEDARHYNGRRLHRGPRPAVLGPRLDVVRRPCPDVPDLLLRRRVPTGAAAVLWLINGVAVKVVGDTDSVSLVKGPARWL LSPRCPSNRRR
Sequences:
>Translated_91_residues MAEDARHYNGRRLHRGPRPAVLGPRLDVVRRPCPDVPDLLLRRRVPTGAAAVLWLINGVAVKVVGDTDSVSLVKGPARWL LSPRCPSNRRR >Mature_90_residues AEDARHYNGRRLHRGPRPAVLGPRLDVVRRPCPDVPDLLLRRRVPTGAAAVLWLINGVAVKVVGDTDSVSLVKGPARWLL SPRCPSNRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10120; Mature: 9989
Theoretical pI: Translated: 12.17; Mature: 12.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEDARHYNGRRLHRGPRPAVLGPRLDVVRRPCPDVPDLLLRRRVPTGAAAVLWLINGVA CCCCCCCCCCCCCCCCCCCCEECCCHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHCCEE VKVVGDTDSVSLVKGPARWLLSPRCPSNRRR EEEECCCCCEEEEECCHHEEECCCCCCCCCC >Mature Secondary Structure AEDARHYNGRRLHRGPRPAVLGPRLDVVRRPCPDVPDLLLRRRVPTGAAAVLWLINGVA CCCCCCCCCCCCCCCCCCCEECCCHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHCCEE VKVVGDTDSVSLVKGPARWLLSPRCPSNRRR EEEECCCCCEEEEECCHHEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA