| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is insN1 [C]
Identifier: 158313228
GI number: 158313228
Start: 1676491
End: 1676781
Strand: Direct
Name: insN1 [C]
Synonym: Franean1_1383
Alternate gene names: 158313228
Gene position: 1676491-1676781 (Clockwise)
Preceding gene: 158313227
Following gene: 158313229
Centisome position: 18.66
GC content: 62.2
Gene sequence:
>291_bases TTGACGCAGAGGCGCAGGAAGTTCTCGCCTGAGTTCAAGGACGAGGCCGTGAAGATGGTGATCGAGACATCCCGTCCGAT CTCCCAGGTCGCGGTTGAACTCGGCATACTGGAGGGAACCCTGGGAACTTGGGTCGCCGCCTACCGGCGAGCCCACGCCG ACGAGGAACCACCGCCCACCGTCGACGAACGCGCCCGGCTACGTGAACTCGAGCGGCAGAACCGCGAGCTGCGCATGGAA AACGAGTTCCTGAAAAAAGCCGCAGCGTACTTCGCCAAGGATCATCGGTGA
Upstream 100 bases:
>100_bases CGACCTCGAGTGTTCCTCACTGCTGCCGGCAGTGGGGCGCCCCTTTTATTCCGGACAGCGGCCCCTACTAGAATGGGGTC CCATCCGGGAGGGAAGATAG
Downstream 100 bases:
>100_bases GCGACACGTTCGAGTTCATCGATGCGGAGTACGCCGCCCGCACCACCACGAACACCAGTGCACCAGCGCCGTCGGTCATC CAGATGTGCGCCTGGCTTAG
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: ISO-S3 11 kDa protein [H]
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTQRRRKFSPEFKDEAVKMVIETSRPISQVAVELGILEGTLGTWVAAYRRAHADEEPPPTVDERARLRELERQNRELRME NEFLKKAAAYFAKDHR
Sequences:
>Translated_96_residues MTQRRRKFSPEFKDEAVKMVIETSRPISQVAVELGILEGTLGTWVAAYRRAHADEEPPPTVDERARLRELERQNRELRME NEFLKKAAAYFAKDHR >Mature_95_residues TQRRRKFSPEFKDEAVKMVIETSRPISQVAVELGILEGTLGTWVAAYRRAHADEEPPPTVDERARLRELERQNRELRMEN EFLKKAAAYFAKDHR
Specific function: Involved in the transposition of the insertion sequence is911 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 11270; Mature: 11139
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRRRKFSPEFKDEAVKMVIETSRPISQVAVELGILEGTLGTWVAAYRRAHADEEPPPT CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VDERARLRELERQNRELRMENEFLKKAAAYFAKDHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQRRRKFSPEFKDEAVKMVIETSRPISQVAVELGILEGTLGTWVAAYRRAHADEEPPPT CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VDERARLRELERQNRELRMENEFLKKAAAYFAKDHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2824781 [H]