| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313227
Identifier: 158313227
GI number: 158313227
Start: 1673150
End: 1674304
Strand: Direct
Name: 158313227
Synonym: Franean1_1382
Alternate gene names: NA
Gene position: 1673150-1674304 (Clockwise)
Preceding gene: 158313226
Following gene: 158313228
Centisome position: 18.63
GC content: 72.47
Gene sequence:
>1155_bases GTGACGTTGCCCTCGCCGACCGCGCCGGACAACACCCCGTTCCACTCCTTCCGGGTGGCGGGCGGCTCGGTCGTCCTCGA CCTGCCGTTCCGCCCTCCACCCGGCTGGACCGTCCGCGCCGCCACTCTGTGGCCGGACTCGCGGTCCTCCTTCGGTTGGA GCGCCGATCACTGGGCGCTCGGACCCGGCGGCCGCGGCTTCGTCCCCGGCCTGATCGACGTCGGCGACGTCATCCAGTTC GCCGCCGAGTCCCAGACCCCCCAGCACGAGCTGCCAGCCAACATCTGGGCACCCCGCCAGACACCCACCGCAGCGCAGCC ACGGGCCATTCACTCCTGGTTCGGCTACCTGCACGGCATCACCCGCACCTCACTGATCGTCCGCGGTCCCTACCCGAGCC CGGAAGCCGCCTACTACACCGCGCAACGCGCCCTGCAGATCGACCTGGCCCGCACCGAGACCGCCCGCGAACTCCCGCAC CCGGCCGAACCTTTGCACCCGGCCGCACCACCGGCCGCGGTCAGCCTCGACTACCACGGCGACGCCGCCACCGTCGGAGA TCCCTACCACGGCTGGATAACCGTCCCCAGCCGCGACCTCGCCAGCGCGCTGATGCTGCCCCGACACGAACTCATCCACC GCCTCAGGGGGCACGTCCCGCACCTGAGCGGACGAGAACCGCAGGTGACCATCGCCGCGCTCGCCGCCCGCCACATCCCC ACCCAGCTACCCGACCTCCTCAATCCACCGACCCCCACACCGCCGCCGCACCCCCCGGGCGTCCCTGGGCCCTCTCAGCC CACGCCTGCCGGACCGGAGGGTCCTGCGGCTGCAGAGCCTGCCCCGTCCACGACTGAACCCACGGCCACGGACCCGCCTG GCAACCGCCACGACGTGCCGGTGACACCGGCGGCGCCATCTGCGCAACACCATCCAGATGGGACGCCCGGCCCACCCGTC AAAATGCATTCAGACCCGGACGCCGCCACATCGACTCCGCCCCCCGCCCCCAGCGCTCCGACAGCGGACCCGACCCCGAC GGGCGCCGCGGCCGGACCCAGCCCCGCGGGCCCGGCTGAAGCCCATGGCCTCGCCAACACCGGTTGGGTCCCACCCGACC TAACCCTGTCCGATCCCGGAATTGATCTGCTGTGA
Upstream 100 bases:
>100_bases AGGCCGCCCGCCAGCGGATCACTCCCGGGAACAGCCCTGACCGGCCGCCGCCCCCAACCGCCTCTGGGGATGAACAATCG GCGGCTCCGTGGTGGCCCTG
Downstream 100 bases:
>100_bases ACCCCGCTGCCGATGGGAACACCGACGTGCTCGGCCAGCCAATCATTCTCGAGAGGATCTACCGGCTGTCCCCGGAAAGC AGTCCGCGAGCCGTCATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTLPSPTAPDNTPFHSFRVAGGSVVLDLPFRPPPGWTVRAATLWPDSRSSFGWSADHWALGPGGRGFVPGLIDVGDVIQF AAESQTPQHELPANIWAPRQTPTAAQPRAIHSWFGYLHGITRTSLIVRGPYPSPEAAYYTAQRALQIDLARTETARELPH PAEPLHPAAPPAAVSLDYHGDAATVGDPYHGWITVPSRDLASALMLPRHELIHRLRGHVPHLSGREPQVTIAALAARHIP TQLPDLLNPPTPTPPPHPPGVPGPSQPTPAGPEGPAAAEPAPSTTEPTATDPPGNRHDVPVTPAAPSAQHHPDGTPGPPV KMHSDPDAATSTPPPAPSAPTADPTPTGAAAGPSPAGPAEAHGLANTGWVPPDLTLSDPGIDLL
Sequences:
>Translated_384_residues MTLPSPTAPDNTPFHSFRVAGGSVVLDLPFRPPPGWTVRAATLWPDSRSSFGWSADHWALGPGGRGFVPGLIDVGDVIQF AAESQTPQHELPANIWAPRQTPTAAQPRAIHSWFGYLHGITRTSLIVRGPYPSPEAAYYTAQRALQIDLARTETARELPH PAEPLHPAAPPAAVSLDYHGDAATVGDPYHGWITVPSRDLASALMLPRHELIHRLRGHVPHLSGREPQVTIAALAARHIP TQLPDLLNPPTPTPPPHPPGVPGPSQPTPAGPEGPAAAEPAPSTTEPTATDPPGNRHDVPVTPAAPSAQHHPDGTPGPPV KMHSDPDAATSTPPPAPSAPTADPTPTGAAAGPSPAGPAEAHGLANTGWVPPDLTLSDPGIDLL >Mature_383_residues TLPSPTAPDNTPFHSFRVAGGSVVLDLPFRPPPGWTVRAATLWPDSRSSFGWSADHWALGPGGRGFVPGLIDVGDVIQFA AESQTPQHELPANIWAPRQTPTAAQPRAIHSWFGYLHGITRTSLIVRGPYPSPEAAYYTAQRALQIDLARTETARELPHP AEPLHPAAPPAAVSLDYHGDAATVGDPYHGWITVPSRDLASALMLPRHELIHRLRGHVPHLSGREPQVTIAALAARHIPT QLPDLLNPPTPTPPPHPPGVPGPSQPTPAGPEGPAAAEPAPSTTEPTATDPPGNRHDVPVTPAAPSAQHHPDGTPGPPVK MHSDPDAATSTPPPAPSAPTADPTPTGAAAGPSPAGPAEAHGLANTGWVPPDLTLSDPGIDLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39987; Mature: 39856
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPSPTAPDNTPFHSFRVAGGSVVLDLPFRPPPGWTVRAATLWPDSRSSFGWSADHWAL CCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEE GPGGRGFVPGLIDVGDVIQFAAESQTPQHELPANIWAPRQTPTAAQPRAIHSWFGYLHGI CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH TRTSLIVRGPYPSPEAAYYTAQRALQIDLARTETARELPHPAEPLHPAAPPAAVSLDYHG HHCEEEEECCCCCCCHHHHHHHHEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC DAATVGDPYHGWITVPSRDLASALMLPRHELIHRLRGHVPHLSGREPQVTIAALAARHIP CCCCCCCCCCCEEECCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHCC TQLPDLLNPPTPTPPPHPPGVPGPSQPTPAGPEGPAAAEPAPSTTEPTATDPPGNRHDVP HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VTPAAPSAQHHPDGTPGPPVKMHSDPDAATSTPPPAPSAPTADPTPTGAAAGPSPAGPAE CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH AHGLANTGWVPPDLTLSDPGIDLL HCCCCCCCCCCCCCEECCCCCCCC >Mature Secondary Structure TLPSPTAPDNTPFHSFRVAGGSVVLDLPFRPPPGWTVRAATLWPDSRSSFGWSADHWAL CCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEE GPGGRGFVPGLIDVGDVIQFAAESQTPQHELPANIWAPRQTPTAAQPRAIHSWFGYLHGI CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH TRTSLIVRGPYPSPEAAYYTAQRALQIDLARTETARELPHPAEPLHPAAPPAAVSLDYHG HHCEEEEECCCCCCCHHHHHHHHEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC DAATVGDPYHGWITVPSRDLASALMLPRHELIHRLRGHVPHLSGREPQVTIAALAARHIP CCCCCCCCCCCEEECCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHCC TQLPDLLNPPTPTPPPHPPGVPGPSQPTPAGPEGPAAAEPAPSTTEPTATDPPGNRHDVP HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VTPAAPSAQHHPDGTPGPPVKMHSDPDAATSTPPPAPSAPTADPTPTGAAAGPSPAGPAE CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH AHGLANTGWVPPDLTLSDPGIDLL HCCCCCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA