| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pgsA2 [H]
Identifier: 158313058
GI number: 158313058
Start: 1442287
End: 1442991
Strand: Direct
Name: pgsA2 [H]
Synonym: Franean1_1206
Alternate gene names: 158313058
Gene position: 1442287-1442991 (Clockwise)
Preceding gene: 158313057
Following gene: 158313059
Centisome position: 16.06
GC content: 72.2
Gene sequence:
>705_bases GTGACCGGCACCGGCGACCTGGTGGCGCCGAAGCCGCCGGTCCTCAACATCGCGAACATCCTGACGATCATCCGGCTGGC CCTGGTGCCGGTCTTTGTGGCCTTCCTGTTCGCCGGCCCGGACACCGACGGCTGGCGCTACGCGGCGTTCGGCGCCTACG CCGTCGCCGCGATCACCGACCAGATCGACGGCTCGATCGCCCGCCGCCGCGGCCTCGTCACCGACTTCGGGATTCTGGTG GATCCCATCGCGGACAAGGCGCTTACCGGTGCCGCGCTGGTCTCGCTGTCGATCCTCAGTGAACTGCCCTGGGCGGTCAC CGTCGTGGTCGCCGTCCGCGAGATCGGCGTGACGCTGCTGCGGCTGTGGGTCATCCGGTACGGGGTGATCGCGGCCAGCC GGGGTGGTAAGGCGAAGACGCTGCTCCTCAACATCTCGCTCGGGCTCTACGTCCTGCCGCTGGAGGGCGTGGCGGCCACG GGACGGGCGGTGATCCTCGCCTGCGGTGTCGTCGTCGCCGCGGTGACCGGGGCGGACTACGTCTACCGGGCACTGGCGCT GCGCCGCCGGGCCACCGCGGCGGCCCGGCCGGGCGGCGCTCCCGCCGTGCCGACCCCCGACGTGCCAAACCTGGGCGGGC CGGCTATGGGTGAGGACCAGGAGGCCGTGACCGGGCCCGGAAGAGGAGAGATCGATGCGCGCTGA
Upstream 100 bases:
>100_bases GTGCCGGGTCGGTCGGTTCGGCCGGGGCGGGTTCCGTGCTGCCGCCGATCCCGGACGGGGTCGGCCCGATGGACGCGGTG GGCCACCCTTCGGGCGTGGC
Downstream 100 bases:
>100_bases GCTGCTGGCGGTGGGGGACGAGCTCCTCTACGGGGACATCGTGAACGGCAACGCGGCCTGGCTGGGACGCCAGCTCGCCG ACGTCGGGGTCGAGGTGGCG
Product: CDP-alcohol phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTGTGDLVAPKPPVLNIANILTIIRLALVPVFVAFLFAGPDTDGWRYAAFGAYAVAAITDQIDGSIARRRGLVTDFGILV DPIADKALTGAALVSLSILSELPWAVTVVVAVREIGVTLLRLWVIRYGVIAASRGGKAKTLLLNISLGLYVLPLEGVAAT GRAVILACGVVVAAVTGADYVYRALALRRRATAAARPGGAPAVPTPDVPNLGGPAMGEDQEAVTGPGRGEIDAR
Sequences:
>Translated_234_residues MTGTGDLVAPKPPVLNIANILTIIRLALVPVFVAFLFAGPDTDGWRYAAFGAYAVAAITDQIDGSIARRRGLVTDFGILV DPIADKALTGAALVSLSILSELPWAVTVVVAVREIGVTLLRLWVIRYGVIAASRGGKAKTLLLNISLGLYVLPLEGVAAT GRAVILACGVVVAAVTGADYVYRALALRRRATAAARPGGAPAVPTPDVPNLGGPAMGEDQEAVTGPGRGEIDAR >Mature_233_residues TGTGDLVAPKPPVLNIANILTIIRLALVPVFVAFLFAGPDTDGWRYAAFGAYAVAAITDQIDGSIARRRGLVTDFGILVD PIADKALTGAALVSLSILSELPWAVTVVVAVREIGVTLLRLWVIRYGVIAASRGGKAKTLLLNISLGLYVLPLEGVAATG RAVILACGVVVAAVTGADYVYRALALRRRATAAARPGGAPAVPTPDVPNLGGPAMGEDQEAVTGPGRGEIDAR
Specific function: This Protein Catalyzes The Committed Step To The Synthesis Of The Acidic Phospholipids. [C]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=132, Percent_Identity=39.3939393939394, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 24086; Mature: 23955
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTGDLVAPKPPVLNIANILTIIRLALVPVFVAFLFAGPDTDGWRYAAFGAYAVAAITD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHH QIDGSIARRRGLVTDFGILVDPIADKALTGAALVSLSILSELPWAVTVVVAVREIGVTLL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RLWVIRYGVIAASRGGKAKTLLLNISLGLYVLPLEGVAATGRAVILACGVVVAAVTGADY HHHHHHHHHHEECCCCCEEEEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH VYRALALRRRATAAARPGGAPAVPTPDVPNLGGPAMGEDQEAVTGPGRGEIDAR HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC >Mature Secondary Structure TGTGDLVAPKPPVLNIANILTIIRLALVPVFVAFLFAGPDTDGWRYAAFGAYAVAAITD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHH QIDGSIARRRGLVTDFGILVDPIADKALTGAALVSLSILSELPWAVTVVVAVREIGVTLL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RLWVIRYGVIAASRGGKAKTLLLNISLGLYVLPLEGVAATGRAVILACGVVVAAVTGADY HHHHHHHHHHEECCCCCEEEEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH VYRALALRRRATAAARPGGAPAVPTPDVPNLGGPAMGEDQEAVTGPGRGEIDAR HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12368430; 12218036; 10889206 [H]