Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158313054

Identifier: 158313054

GI number: 158313054

Start: 1435420

End: 1436313

Strand: Direct

Name: 158313054

Synonym: Franean1_1202

Alternate gene names: NA

Gene position: 1435420-1436313 (Clockwise)

Preceding gene: 158313053

Following gene: 158313055

Centisome position: 15.98

GC content: 74.94

Gene sequence:

>894_bases
ATGAGCACGGAGAGACCCGACCCGCGGTCGCACCAGAGCGGCGCCGAACCGCCCGGTCCGGAGACCGCCTACCGCCGGTT
GCTGCTCTGCTATCCGCGCCGCTGGCGGGAGGCCCGCGGTGAGGAGCTCCTCGGCACGCTGCTCGACGGCGCCGAGGCGG
CCGGGCGCACCCGGCCGAGCAGGGCGGAGGTGGTTGACCTCGTCGTGCACGGCCTGGCGACCAGGTGCGCGCTCGCCGCC
GCCGTCGCCGGCCGGCGACGGATCATGCGGGTGGCCCTCGTGGTGACGTATCCCGCCACCGGGACGGTGCTCGCGCTCGG
CCGTCACACCGACCTGTTGCGCCCACCGCTGTCGCTGCTGCTGGTACTGGCGGTGTTGGCCGTCCCGGCACTGGCGGGGG
CCGCGGTCACCCGCGCGCCCGGTCGCCGGGGCGCGGGCCCCCGGGGCCTGGTGGCGGCGACGGGCGCCGTCCTCGGCTGG
GTCGCGCTCCTCGGCGTCTTCGGCTACCGGTTCGGATGGTGGAGCACGCACGACGACGGCTTCCTCGGCACGCTGCGACT
GTCCTCGACGGGCTACTGGAGCGGCTCCTTCTACGGGTCGCTCGCCGAGACGGTGCCACAGGGGCTGCTCGCGGGGGGCC
TGCTGGGCGCGATCGTGGGTGTTCGGCGGCCGGGCTGGGTGGCCGCGGTCTTCGTCTGCGGCGTCGTCCTGTGCGTGCTC
CCGGTGCTGCACGCGTGGGTCGACCACTGGGTTTTCCATCAGCGGATCATCCAGATCGCCCTGGCGCTGGCGGTTCTGCT
GTCCGTGGCGCTGGTAGACGCGTGGCGTGCCCGGCGGATCCTGTCGACGAAGGGCCCCGCGGGGCCGGCTGGCGTGCCGC
CGACGCTGATCTGA

Upstream 100 bases:

>100_bases
TGCGCGTCCGGCCCGCCACCGGCCCGGCGACGGCGTTCGCCCGGGTGACCAGGCTGGCGCCCCCGAGCGTGCCGGCGATC
GGCTGAGGGCGCGGCGGACG

Downstream 100 bases:

>100_bases
CGGCTTCTCGTCAGCTCAGCGCTCAGCCGAGGCGGGCGGATGGCCTGACCGGGCGGGGAGATGCCCGGGACCACAGATGT
GGCGCGCCCGGATAGTCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSTERPDPRSHQSGAEPPGPETAYRRLLLCYPRRWREARGEELLGTLLDGAEAAGRTRPSRAEVVDLVVHGLATRCALAA
AVAGRRRIMRVALVVTYPATGTVLALGRHTDLLRPPLSLLLVLAVLAVPALAGAAVTRAPGRRGAGPRGLVAATGAVLGW
VALLGVFGYRFGWWSTHDDGFLGTLRLSSTGYWSGSFYGSLAETVPQGLLAGGLLGAIVGVRRPGWVAAVFVCGVVLCVL
PVLHAWVDHWVFHQRIIQIALALAVLLSVALVDAWRARRILSTKGPAGPAGVPPTLI

Sequences:

>Translated_297_residues
MSTERPDPRSHQSGAEPPGPETAYRRLLLCYPRRWREARGEELLGTLLDGAEAAGRTRPSRAEVVDLVVHGLATRCALAA
AVAGRRRIMRVALVVTYPATGTVLALGRHTDLLRPPLSLLLVLAVLAVPALAGAAVTRAPGRRGAGPRGLVAATGAVLGW
VALLGVFGYRFGWWSTHDDGFLGTLRLSSTGYWSGSFYGSLAETVPQGLLAGGLLGAIVGVRRPGWVAAVFVCGVVLCVL
PVLHAWVDHWVFHQRIIQIALALAVLLSVALVDAWRARRILSTKGPAGPAGVPPTLI
>Mature_296_residues
STERPDPRSHQSGAEPPGPETAYRRLLLCYPRRWREARGEELLGTLLDGAEAAGRTRPSRAEVVDLVVHGLATRCALAAA
VAGRRRIMRVALVVTYPATGTVLALGRHTDLLRPPLSLLLVLAVLAVPALAGAAVTRAPGRRGAGPRGLVAATGAVLGWV
ALLGVFGYRFGWWSTHDDGFLGTLRLSSTGYWSGSFYGSLAETVPQGLLAGGLLGAIVGVRRPGWVAAVFVCGVVLCVLP
VLHAWVDHWVFHQRIIQIALALAVLLSVALVDAWRARRILSTKGPAGPAGVPPTLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31418; Mature: 31287

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTERPDPRSHQSGAEPPGPETAYRRLLLCYPRRWREARGEELLGTLLDGAEAAGRTRPS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
RAEVVDLVVHGLATRCALAAAVAGRRRIMRVALVVTYPATGTVLALGRHTDLLRPPLSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCHHHCCHHHHH
LVLAVLAVPALAGAAVTRAPGRRGAGPRGLVAATGAVLGWVALLGVFGYRFGWWSTHDDG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
FLGTLRLSSTGYWSGSFYGSLAETVPQGLLAGGLLGAIVGVRRPGWVAAVFVCGVVLCVL
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
PVLHAWVDHWVFHQRIIQIALALAVLLSVALVDAWRARRILSTKGPAGPAGVPPTLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STERPDPRSHQSGAEPPGPETAYRRLLLCYPRRWREARGEELLGTLLDGAEAAGRTRPS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
RAEVVDLVVHGLATRCALAAAVAGRRRIMRVALVVTYPATGTVLALGRHTDLLRPPLSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCHHHCCHHHHH
LVLAVLAVPALAGAAVTRAPGRRGAGPRGLVAATGAVLGWVALLGVFGYRFGWWSTHDDG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
FLGTLRLSSTGYWSGSFYGSLAETVPQGLLAGGLLGAIVGVRRPGWVAAVFVCGVVLCVL
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
PVLHAWVDHWVFHQRIIQIALALAVLLSVALVDAWRARRILSTKGPAGPAGVPPTLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA