Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158312957

Identifier: 158312957

GI number: 158312957

Start: 1317644

End: 1320091

Strand: Direct

Name: 158312957

Synonym: Franean1_1103

Alternate gene names: NA

Gene position: 1317644-1320091 (Clockwise)

Preceding gene: 158312956

Following gene: 158312959

Centisome position: 14.67

GC content: 76.72

Gene sequence:

>2448_bases
ATGAGCCGTCGTTCCACCGGCAGCGTGGGTGGACGCCGAGGCGGCTCGCACCGCTCGTCGCCCGGAGTATCGGACATCGT
GTGGGTCGACCCGCCGTCCGGGGGCCGCCGCCGGACGGGCGGTCGCCGCCGTTCCACCTCAGGGCGCGTCGAGGCCACCG
CGCGTACCGAGCTTCCTGCGCGTACCGAGCTTCCTGCGCGTACCGAGCTTCCTGAGCGCACCGACAGCCTGGCGCCCGCC
GAGGGCCGCGTGCCCACCGACGACGGCGTGGGCACCGAGGGCCGTGTGCCGGCCGGCCGCGTGCCGGTCGACGGCCGCGT
GCCTGCTGATGGCCGCGTGCCCGCCGGCGGCGCCGGACCGGCTGGAAGCTCCCCCCGCGCCATGCCGTCTCCGGACGCCG
ATGCCTCCGAGCAGGACGTTCTCTACGGTCGGTCGTCCTCTGTCGAGCGGGCTGCGGCCCGCCGGGGCGAGATCGCCGCC
GGCCGCCGGGTACGACTGGGGCGGCGCCCCGCGCCCGGCGCGTGGCCGGTGGGCGGGAGCCAGTCGCGCACCACGCGGAG
CCGGGGTCTGGCCGGGGGGCGCGGCCGGAGACGGGACCGGGACGCTCCCACGAACGGGTCCTGGTCGCTGCCGAAGATCG
CGCTCGCGGCCACGGCTCTCGCGCTCGCCGTCACCGCGGTGGCCGGGCCGTCGTCCGAAACCGCCGCAGCGAAGCTCACC
GGCCCCGTCAACGGACGGGTCGACCAGACCGAGTTGCTCCCCGAGGGTGGCGCCGCCTTCGGGGGCGCGACCGTGGAAGA
CCTCGCCAGCGTCGTGGGCGCGTCCGGGCAGGTCCGCCTGCCCGTGCGAGCCGGGCTCGCCGCCTCGCCGGTCACGAGCC
GGCCGGCCGGGTCCGCCACGGCCACGTCCGGCACGTCCCCGACGGCAGACGCGTCGCCTTCGCCGGCCGGGACGTCGTCG
ACCGGAACAGCGTCGACCGGAACAGCGGCCGCGGGCGCGTCGGACGACGGCACCGTCCGCAACGCGCCGCTCGCGACCCC
GCCCGGCTCCAGCAAGGAGGCGTCGACCATCCCGGCCCGGGCCCTGGCGGCGTACACCAACGCGGCCGACCGGGCCGCGA
CCGAACATCCAGGCTGCTACCTGCACTGGTCGGTCCTCGCCGGCATCGGCGCGATCGAGTCGGGCCACGGGCAGGGTGCG
CGCACGGACAGTAACGGCCGGGTCGCGCCCACCGTTGTCGGCCCGCGTCTCGACGGCTCGCCCGGGATGTTCCGCATCCG
CGACACCGACGACGGCTGGCTCGACGGCGACACCGTCTGGGACCGGGCGGTCGGCCCGATGCAGTTCACGCCGTCGATGT
GGCGGTGGATCGGGCGCGACGCCGACGGCGACGGCCGCGCGGACCCCAACGACTTCGACGACGCCACCCTGACCGCCGCC
GATCGCCTCTGCCAGGCCGGGGGTGACCTGCGCGTCCCCGACAACGTGCTCTCCGCGGTGCGCTCCTACAACCCCTCCGA
CGGCTACATCCGCTCCGTGCTCGGCTGGGCGGCCTGGTACGCCGTCGGACCGGCGGTCGTCGGGAACCTGGGCACCGGGA
CGGCCGACGCGGCGGGCGCCGGCGCGACCGGGGGCGACGGCGGCGACCCGACCACCGACGCCCTGGCGACCGACCAGCCC
TTCCAGGTCACCACCCTCGTCCCGCTGCCGGGCTCGTCCGACGGCACCTGCGTGGCCCCCGTGATCGACCAGGCGTCGAT
CAGCGCGGGCGGTGTCGGCGGAGACGTCGTGACCGGATCGGAGTACGAGTCGCTGGAGGTCCGCGCCCGGGTGGGCGGCA
CCGCCGAGCGGACCGTGACCATCGAGCTCACCCTGCTGGACAAGACCGGGGCGACGGTGGCGACCGGGGTGAGCGCGCGG
GCGCTGCCCGGCGGCGACGGCGTCGTGCCGCTGGGCCGGCTGGACGGGCTGGCGATCGGGCGGGCCACCGGCCGCGGCCC
GTTCGACGTGAAGGTCCAGGTCCTGCCGGCCGGCCAGGACTGCCAGCCGGTGCAGGCCACCGCGCGGGTCGGCAACGTCG
ATCCCGCGGACTTCGCCGGCGCGCCGTCCACGCTGGCCAGCCTCCGGCGGCGGCTGGAAACCTACCGGGACATGGGACGG
ATCACCCAGACAGCCGCGGCGGACCTGCTCGCCACCCTGCCGGCCGGCGACGGCGGCCTGCAGGCCTCGGTGGAGCTCGC
CCGCTTCCTCGACCGCCTCGCCGCGGCCATCCGGATCGGGGAGATCGCCGCCGACGCGGCGACAGGCCTCGGTGACGTCG
CCAATGCCCTGCAATCCCAGCTGAACCCGCCGGCGAGCACACCGCCCGCGGGCGGGACCCCGTCACCGGACACGAACGAG
GACGTCCCCCTGCCGTTCGACGTGGTCCCGCTGGCGCCCGGGACCTGA

Upstream 100 bases:

>100_bases
GCGATCTCGGCTGCTGCGGCCGAGGAGAGGGGACGGCCGTGTCGCGGTGCCCGGCGGTTGAGCGCCCGACAGGGCGCGAC
CGTGCTCGGGGAGGTCGGCG

Downstream 100 bases:

>100_bases
CCGGGACGCTGCGCGGGCTCGCCGCCGCGGCATCCCGACCCCTCCACCTCGTCCCACGTTCAGTCACTCAGAGTGACAGG
CGTGGTGGTCGGGGCATGCG

Product: membrane-bound lytic murein transglycosylase B-like protein

Products: NA

Alternate protein names: Membrane-Bound Lytic Murein Transglycosylase B-Like Protein; Membrane-Bound Lytic Murein Transglycosylase B; Lipoprotein LpqU; Lytic Transglycosylase Catalytic; NLP/P60-Family Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase B-Like; Transglycosylase; LOW QUALITY PROTEIN Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase; LpqU Protein; Membrane-Bound Lytic Murein Transglycosylase B Protein; NLP/P60 Protein

Number of amino acids: Translated: 815; Mature: 814

Protein sequence:

>815_residues
MSRRSTGSVGGRRGGSHRSSPGVSDIVWVDPPSGGRRRTGGRRRSTSGRVEATARTELPARTELPARTELPERTDSLAPA
EGRVPTDDGVGTEGRVPAGRVPVDGRVPADGRVPAGGAGPAGSSPRAMPSPDADASEQDVLYGRSSSVERAAARRGEIAA
GRRVRLGRRPAPGAWPVGGSQSRTTRSRGLAGGRGRRRDRDAPTNGSWSLPKIALAATALALAVTAVAGPSSETAAAKLT
GPVNGRVDQTELLPEGGAAFGGATVEDLASVVGASGQVRLPVRAGLAASPVTSRPAGSATATSGTSPTADASPSPAGTSS
TGTASTGTAAAGASDDGTVRNAPLATPPGSSKEASTIPARALAAYTNAADRAATEHPGCYLHWSVLAGIGAIESGHGQGA
RTDSNGRVAPTVVGPRLDGSPGMFRIRDTDDGWLDGDTVWDRAVGPMQFTPSMWRWIGRDADGDGRADPNDFDDATLTAA
DRLCQAGGDLRVPDNVLSAVRSYNPSDGYIRSVLGWAAWYAVGPAVVGNLGTGTADAAGAGATGGDGGDPTTDALATDQP
FQVTTLVPLPGSSDGTCVAPVIDQASISAGGVGGDVVTGSEYESLEVRARVGGTAERTVTIELTLLDKTGATVATGVSAR
ALPGGDGVVPLGRLDGLAIGRATGRGPFDVKVQVLPAGQDCQPVQATARVGNVDPADFAGAPSTLASLRRRLETYRDMGR
ITQTAAADLLATLPAGDGGLQASVELARFLDRLAAAIRIGEIAADAATGLGDVANALQSQLNPPASTPPAGGTPSPDTNE
DVPLPFDVVPLAPGT

Sequences:

>Translated_815_residues
MSRRSTGSVGGRRGGSHRSSPGVSDIVWVDPPSGGRRRTGGRRRSTSGRVEATARTELPARTELPARTELPERTDSLAPA
EGRVPTDDGVGTEGRVPAGRVPVDGRVPADGRVPAGGAGPAGSSPRAMPSPDADASEQDVLYGRSSSVERAAARRGEIAA
GRRVRLGRRPAPGAWPVGGSQSRTTRSRGLAGGRGRRRDRDAPTNGSWSLPKIALAATALALAVTAVAGPSSETAAAKLT
GPVNGRVDQTELLPEGGAAFGGATVEDLASVVGASGQVRLPVRAGLAASPVTSRPAGSATATSGTSPTADASPSPAGTSS
TGTASTGTAAAGASDDGTVRNAPLATPPGSSKEASTIPARALAAYTNAADRAATEHPGCYLHWSVLAGIGAIESGHGQGA
RTDSNGRVAPTVVGPRLDGSPGMFRIRDTDDGWLDGDTVWDRAVGPMQFTPSMWRWIGRDADGDGRADPNDFDDATLTAA
DRLCQAGGDLRVPDNVLSAVRSYNPSDGYIRSVLGWAAWYAVGPAVVGNLGTGTADAAGAGATGGDGGDPTTDALATDQP
FQVTTLVPLPGSSDGTCVAPVIDQASISAGGVGGDVVTGSEYESLEVRARVGGTAERTVTIELTLLDKTGATVATGVSAR
ALPGGDGVVPLGRLDGLAIGRATGRGPFDVKVQVLPAGQDCQPVQATARVGNVDPADFAGAPSTLASLRRRLETYRDMGR
ITQTAAADLLATLPAGDGGLQASVELARFLDRLAAAIRIGEIAADAATGLGDVANALQSQLNPPASTPPAGGTPSPDTNE
DVPLPFDVVPLAPGT
>Mature_814_residues
SRRSTGSVGGRRGGSHRSSPGVSDIVWVDPPSGGRRRTGGRRRSTSGRVEATARTELPARTELPARTELPERTDSLAPAE
GRVPTDDGVGTEGRVPAGRVPVDGRVPADGRVPAGGAGPAGSSPRAMPSPDADASEQDVLYGRSSSVERAAARRGEIAAG
RRVRLGRRPAPGAWPVGGSQSRTTRSRGLAGGRGRRRDRDAPTNGSWSLPKIALAATALALAVTAVAGPSSETAAAKLTG
PVNGRVDQTELLPEGGAAFGGATVEDLASVVGASGQVRLPVRAGLAASPVTSRPAGSATATSGTSPTADASPSPAGTSST
GTASTGTAAAGASDDGTVRNAPLATPPGSSKEASTIPARALAAYTNAADRAATEHPGCYLHWSVLAGIGAIESGHGQGAR
TDSNGRVAPTVVGPRLDGSPGMFRIRDTDDGWLDGDTVWDRAVGPMQFTPSMWRWIGRDADGDGRADPNDFDDATLTAAD
RLCQAGGDLRVPDNVLSAVRSYNPSDGYIRSVLGWAAWYAVGPAVVGNLGTGTADAAGAGATGGDGGDPTTDALATDQPF
QVTTLVPLPGSSDGTCVAPVIDQASISAGGVGGDVVTGSEYESLEVRARVGGTAERTVTIELTLLDKTGATVATGVSARA
LPGGDGVVPLGRLDGLAIGRATGRGPFDVKVQVLPAGQDCQPVQATARVGNVDPADFAGAPSTLASLRRRLETYRDMGRI
TQTAAADLLATLPAGDGGLQASVELARFLDRLAAAIRIGEIAADAATGLGDVANALQSQLNPPASTPPAGGTPSPDTNED
VPLPFDVVPLAPGT

Specific function: Unknown

COG id: COG2951

COG function: function code M; Membrane-bound lytic murein transglycosylase B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81873; Mature: 81742

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRSTGSVGGRRGGSHRSSPGVSDIVWVDPPSGGRRRTGGRRRSTSGRVEATARTELPA
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
RTELPARTELPERTDSLAPAEGRVPTDDGVGTEGRVPAGRVPVDGRVPADGRVPAGGAGP
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGSSPRAMPSPDADASEQDVLYGRSSSVERAAARRGEIAAGRRVRLGRRPAPGAWPVGGS
CCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCC
QSRTTRSRGLAGGRGRRRDRDAPTNGSWSLPKIALAATALALAVTAVAGPSSETAAAKLT
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
GPVNGRVDQTELLPEGGAAFGGATVEDLASVVGASGQVRLPVRAGLAASPVTSRPAGSAT
CCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCCCC
ATSGTSPTADASPSPAGTSSTGTASTGTAAAGASDDGTVRNAPLATPPGSSKEASTIPAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ALAAYTNAADRAATEHPGCYLHWSVLAGIGAIESGHGQGARTDSNGRVAPTVVGPRLDGS
HHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
PGMFRIRDTDDGWLDGDTVWDRAVGPMQFTPSMWRWIGRDADGDGRADPNDFDDATLTAA
CCEEEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
DRLCQAGGDLRVPDNVLSAVRSYNPSDGYIRSVLGWAAWYAVGPAVVGNLGTGTADAAGA
HHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GATGGDGGDPTTDALATDQPFQVTTLVPLPGSSDGTCVAPVIDQASISAGGVGGDVVTGS
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
EYESLEVRARVGGTAERTVTIELTLLDKTGATVATGVSARALPGGDGVVPLGRLDGLAIG
CCCCEEEEEECCCCCEEEEEEEEEEEECCCCEEECCCCCCCCCCCCCEEECCCCCCEEEE
RATGRGPFDVKVQVLPAGQDCQPVQATARVGNVDPADFAGAPSTLASLRRRLETYRDMGR
CCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
ITQTAAADLLATLPAGDGGLQASVELARFLDRLAAAIRIGEIAADAATGLGDVANALQSQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LNPPASTPPAGGTPSPDTNEDVPLPFDVVPLAPGT
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
SRRSTGSVGGRRGGSHRSSPGVSDIVWVDPPSGGRRRTGGRRRSTSGRVEATARTELPA
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
RTELPARTELPERTDSLAPAEGRVPTDDGVGTEGRVPAGRVPVDGRVPADGRVPAGGAGP
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGSSPRAMPSPDADASEQDVLYGRSSSVERAAARRGEIAAGRRVRLGRRPAPGAWPVGGS
CCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCC
QSRTTRSRGLAGGRGRRRDRDAPTNGSWSLPKIALAATALALAVTAVAGPSSETAAAKLT
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
GPVNGRVDQTELLPEGGAAFGGATVEDLASVVGASGQVRLPVRAGLAASPVTSRPAGSAT
CCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCCCC
ATSGTSPTADASPSPAGTSSTGTASTGTAAAGASDDGTVRNAPLATPPGSSKEASTIPAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ALAAYTNAADRAATEHPGCYLHWSVLAGIGAIESGHGQGARTDSNGRVAPTVVGPRLDGS
HHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
PGMFRIRDTDDGWLDGDTVWDRAVGPMQFTPSMWRWIGRDADGDGRADPNDFDDATLTAA
CCEEEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
DRLCQAGGDLRVPDNVLSAVRSYNPSDGYIRSVLGWAAWYAVGPAVVGNLGTGTADAAGA
HHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GATGGDGGDPTTDALATDQPFQVTTLVPLPGSSDGTCVAPVIDQASISAGGVGGDVVTGS
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
EYESLEVRARVGGTAERTVTIELTLLDKTGATVATGVSARALPGGDGVVPLGRLDGLAIG
CCCCEEEEEECCCCCEEEEEEEEEEEECCCCEEECCCCCCCCCCCCCEEECCCCCCEEEE
RATGRGPFDVKVQVLPAGQDCQPVQATARVGNVDPADFAGAPSTLASLRRRLETYRDMGR
CCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
ITQTAAADLLATLPAGDGGLQASVELARFLDRLAAAIRIGEIAADAATGLGDVANALQSQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LNPPASTPPAGGTPSPDTNEDVPLPFDVVPLAPGT
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA