| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is ilvC
Identifier: 158312946
GI number: 158312946
Start: 1303736
End: 1304731
Strand: Direct
Name: ilvC
Synonym: Franean1_1092
Alternate gene names: 158312946
Gene position: 1303736-1304731 (Clockwise)
Preceding gene: 158312945
Following gene: 158312947
Centisome position: 14.51
GC content: 70.08
Gene sequence:
>996_bases ATGGTCGAGATCTACTACGACGACGACGCCAACCTCGACAACCTGGCCGACCGCAAGGTCGCCGTGATCGGCTTCGGCAG CCAGGGGCACGCGCACGCGCTGAACCTGCGCGACAGCGGGGTCGACGTCCGCGTCGGGCTGCCGGAGACGAGCACCAGCC GGGCCAAGGCCGAGGAGCAGGGCCTGCGGGTGGTGACCCCGGCGGAGGCGTCCGCCGAGGCCGACATCATCATGATCCTC ACGCCGGACACGACCCACCGCAAGATCTACGCCGAGTCGATCGCGCCGCACCTCACCCCCGGCAAGGCGCTGGCGTTCGG GCACGGGTTCAACATCCGGTACGGCCTCATCGAGCCGCCGGCCGGCGTCGACGTCTTCATGGTCGCCCCCAAGGGCCCTG GTCACCTCGTCCGCCGGGTGTTCGTCGAGGGCAAGGGCGTACCGGTGCTCGTCGCCGTCGAGGCCGACGCCACCGGCAAG GCGCTCGACATCGCGCTCGCCTACGCGAAGGGCATCGGCGGCACCCGGGCCGGCGCGCTGCGCACGACCTTCACCGAGGA GACCGAGACCGACCTGTTCGGCGAGCAGGCGGTGCTCTGCGGCGGCGCCAGCGCGCTGGTCCAGGCCGGCTTCGAGACGC TGGTCGAGGCGGGCTACACCCCCGAGGTCGCGTACTTCGAGTGCCTGCACGAGCTGAAGCTGATCGTCGACCTCATGTAC GAGGGCGGCATCTCGCAGATGCGCTACTCCATCTCGGACACCGCCGAGTACGGCGACGTCACTCGCGGCCCGCGGGTGAT CACCCCGGCGGTCAAGGCCGAGATGCGCAAGATCCTCGACGAGATCCAGGACGGGACGTTCGCCCGCGAGTGGGTCGCCG AGGACGACGCGGGCCGGGCCACCTTCACCAAGCTCGTCGAGGAGGGCAAGCAGCACCCGATCGAGCAGGTCGGTGGCAAG CTCCGCCCGATGATGTCCTGGATCGCGAAGGACTGA
Upstream 100 bases:
>100_bases TCGCGGTCGATCACCGATCGCAGTCTGCGCGCCGTCGAGCGCTCGGCCTGACTCCCATCCCTCATTCACCCCTCATTTCC CTCGAGGAGATTCACCGAAG
Downstream 100 bases:
>100_bases GGCGAGCCGGGCCGGGCGGCACGTGCCGCCCGGCCCGTCGACGTGCGCCCGCGCCCGCCGCAGGTGAGAGCGGGCACACC CGTCGCGGCGCCCGAACGTG
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MVEIYYDDDANLDNLADRKVAVIGFGSQGHAHALNLRDSGVDVRVGLPETSTSRAKAEEQGLRVVTPAEASAEADIIMIL TPDTTHRKIYAESIAPHLTPGKALAFGHGFNIRYGLIEPPAGVDVFMVAPKGPGHLVRRVFVEGKGVPVLVAVEADATGK ALDIALAYAKGIGGTRAGALRTTFTEETETDLFGEQAVLCGGASALVQAGFETLVEAGYTPEVAYFECLHELKLIVDLMY EGGISQMRYSISDTAEYGDVTRGPRVITPAVKAEMRKILDEIQDGTFAREWVAEDDAGRATFTKLVEEGKQHPIEQVGGK LRPMMSWIAKD
Sequences:
>Translated_331_residues MVEIYYDDDANLDNLADRKVAVIGFGSQGHAHALNLRDSGVDVRVGLPETSTSRAKAEEQGLRVVTPAEASAEADIIMIL TPDTTHRKIYAESIAPHLTPGKALAFGHGFNIRYGLIEPPAGVDVFMVAPKGPGHLVRRVFVEGKGVPVLVAVEADATGK ALDIALAYAKGIGGTRAGALRTTFTEETETDLFGEQAVLCGGASALVQAGFETLVEAGYTPEVAYFECLHELKLIVDLMY EGGISQMRYSISDTAEYGDVTRGPRVITPAVKAEMRKILDEIQDGTFAREWVAEDDAGRATFTKLVEEGKQHPIEQVGGK LRPMMSWIAKD >Mature_331_residues MVEIYYDDDANLDNLADRKVAVIGFGSQGHAHALNLRDSGVDVRVGLPETSTSRAKAEEQGLRVVTPAEASAEADIIMIL TPDTTHRKIYAESIAPHLTPGKALAFGHGFNIRYGLIEPPAGVDVFMVAPKGPGHLVRRVFVEGKGVPVLVAVEADATGK ALDIALAYAKGIGGTRAGALRTTFTEETETDLFGEQAVLCGGASALVQAGFETLVEAGYTPEVAYFECLHELKLIVDLMY EGGISQMRYSISDTAEYGDVTRGPRVITPAVKAEMRKILDEIQDGTFAREWVAEDDAGRATFTKLVEEGKQHPIEQVGGK LRPMMSWIAKD
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=294, Percent_Identity=36.3945578231293, Blast_Score=150, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6323387, Length=326, Percent_Identity=33.1288343558282, Blast_Score=132, Evalue=9e-32,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_FRASN (A8L548)
Other databases:
- EMBL: CP000820 - RefSeq: YP_001505454.1 - ProteinModelPortal: A8L548 - SMR: A8L548 - GeneID: 5669506 - GenomeReviews: CP000820_GR - KEGG: fre:Franean1_1092 - HOGENOM: HBG286525 - OMA: MAYAKGI - ProtClustDB: PRK05479 - BioCyc: FSP1855:FRANEAN1_1092-MONOMER - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 35631; Mature: 35631
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: ACT_SITE 108-108
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEIYYDDDANLDNLADRKVAVIGFGSQGHAHALNLRDSGVDVRVGLPETSTSRAKAEEQ CEEEEECCCCCCCHHCCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHC GLRVVTPAEASAEADIIMILTPDTTHRKIYAESIAPHLTPGKALAFGHGFNIRYGLIEPP CCEEEECCCCCCCCCEEEEECCCCCCCEEEHHHCCCCCCCCCEEEEECCCEEEEEEECCC AGVDVFMVAPKGPGHLVRRVFVEGKGVPVLVAVEADATGKALDIALAYAKGIGGTRAGAL CCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHEEEHHHHCCCCCCCCCE RTTFTEETETDLFGEQAVLCGGASALVQAGFETLVEAGYTPEVAYFECLHELKLIVDLMY EEEECCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EGGISQMRYSISDTAEYGDVTRGPRVITPAVKAEMRKILDEIQDGTFAREWVAEDDAGRA HCCHHHHEECCCCCHHCCCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHH TFTKLVEEGKQHPIEQVGGKLRPMMSWIAKD HHHHHHHHHHCCCHHHHCCHHHHHHHHHHCC >Mature Secondary Structure MVEIYYDDDANLDNLADRKVAVIGFGSQGHAHALNLRDSGVDVRVGLPETSTSRAKAEEQ CEEEEECCCCCCCHHCCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHC GLRVVTPAEASAEADIIMILTPDTTHRKIYAESIAPHLTPGKALAFGHGFNIRYGLIEPP CCEEEECCCCCCCCCEEEEECCCCCCCEEEHHHCCCCCCCCCEEEEECCCEEEEEEECCC AGVDVFMVAPKGPGHLVRRVFVEGKGVPVLVAVEADATGKALDIALAYAKGIGGTRAGAL CCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHEEEHHHHCCCCCCCCCE RTTFTEETETDLFGEQAVLCGGASALVQAGFETLVEAGYTPEVAYFECLHELKLIVDLMY EEEECCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EGGISQMRYSISDTAEYGDVTRGPRVITPAVKAEMRKILDEIQDGTFAREWVAEDDAGRA HCCHHHHEECCCCCHHCCCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHH TFTKLVEEGKQHPIEQVGGKLRPMMSWIAKD HHHHHHHHHHCCCHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA