| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312916
Identifier: 158312916
GI number: 158312916
Start: 1253107
End: 1254300
Strand: Direct
Name: 158312916
Synonym: Franean1_1062
Alternate gene names: NA
Gene position: 1253107-1254300 (Clockwise)
Preceding gene: 158312915
Following gene: 158312917
Centisome position: 13.95
GC content: 72.28
Gene sequence:
>1194_bases TTGCGTCACTTCAGCTTCCTGGACGGCCAGACCGCCAGGACCCTGTTCCACCGAGCTCCGGAAGAGATCACGACCGGCGG TGACCGGCGGCTCGTCGCGACCGCGCTCGGCGCCACCCTGTACGCCCCCGGTACCCGCCCGCGACTGGCCTCGGACGTCC GCCGCCAGGTGGCGGCCGGGGTGACCTCGATGGTCCTCTGCCTGGAGGACGCCATCGCCGACCACGAGGTGCTCGGGGCC GAGTCGAACGTGGCCGCGGCGCTCGCCGATCTGGGGGAGGACCCGCCGGCCTGCGGTGAGGGTCTGCCGCTGCTGTTCGT CCGGGTGCGCGCCGTCGCGCAGATCCCGGCGCTGCTGGCCCGGCTGGGCGGGCCCGCGCGCTCCCTGCTCGCCGGGTTCG TCCTGCCGAAGTTCAGCGAGGAGAGCGGCGAGGCGGCGCTCGAGGCGGTGCTGCGAGGGTCCGACACCCTTGGCCGGCTG CTGTGGGCGATGCCCGTCCTGGAAAGCCCGCAGGTGATCTACCGCGAGACCAGGATCGAGACCCTGACGGCCGTGCGCCG CCTGGTCGACAAGCACGCCGACCACGTGCTGGCCGTCCGGCTGGGCGCCACCGACCTGTCCGGGGTGTTCGGCCTGCGCC GCGACCGTGATCTGACCATCTACGACATCGCGGTGGTACGCGACTGCATCGCCGACATCGTGAACATCTGCGCCCGTGGC GGCGATCATGTCGTCACCGGCCCGGTGTGGGAGTACTTCGCCCAGCCCGAGCGCCTGTTCGTGAGCTCCCTGCGGGTGAC GCCGTTCGAGGAGGCCGACCTCGTCGACGGCAGCGAGCGCGGCGCGCGGATCCGCACGGAGCTCGTCTCGGCCGACCTCG ACCGGCTCATCCGGGAGGTCGTCCTCGACAAGGCCAACGGCCTGATCGGCAAGACGGTGATCCACCCGAGCCACGTGCCG GCCGTCCACGCGCTGAATGTCGTCACCCAGGAGGAGTACGAGGACGCGGAGGCGGTCCTCGAGGGGGACGCGGGCGGCGT CCGGCCGAGCAGCTACGCGAACAAGATGAACGAGCTGCGCCCGCACCGTCCGTGGGCGCAGGCCGTGCAACGGCGGGCAC GGGCCTTCGGCGTGCTGCGCGAGGGCCTCACCTTCGTCGACGTTCTGGCCGCGACGCAGGACGCGTTGCGGTGA
Upstream 100 bases:
>100_bases GTTGCGGTTCCCGCTTACGAGGGCTCGCGGGATCGCTCGCGCAGGCCCGCCGGATCGTCCGTCCCCGGATCGTCGGATCG TCTCGACAGGAGCGCGCCGC
Downstream 100 bases:
>100_bases CCGGGCAGGATCGGATGCTCGGCCAGGACCGGACGCGTGACCCCGACTGGCTGTGGGAGGAGCTCGGGCTGGGGATCGAG GTGCGCGGCGGCGAACCGGC
Product: putative ATP/GTP-binding protein
Products: NA
Alternate protein names: Citrate Lyase Beta Subunit; Citrate Lyase Subunit Beta; Citrate Lyase Beta Subunit-Like
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MRHFSFLDGQTARTLFHRAPEEITTGGDRRLVATALGATLYAPGTRPRLASDVRRQVAAGVTSMVLCLEDAIADHEVLGA ESNVAAALADLGEDPPACGEGLPLLFVRVRAVAQIPALLARLGGPARSLLAGFVLPKFSEESGEAALEAVLRGSDTLGRL LWAMPVLESPQVIYRETRIETLTAVRRLVDKHADHVLAVRLGATDLSGVFGLRRDRDLTIYDIAVVRDCIADIVNICARG GDHVVTGPVWEYFAQPERLFVSSLRVTPFEEADLVDGSERGARIRTELVSADLDRLIREVVLDKANGLIGKTVIHPSHVP AVHALNVVTQEEYEDAEAVLEGDAGGVRPSSYANKMNELRPHRPWAQAVQRRARAFGVLREGLTFVDVLAATQDALR
Sequences:
>Translated_397_residues MRHFSFLDGQTARTLFHRAPEEITTGGDRRLVATALGATLYAPGTRPRLASDVRRQVAAGVTSMVLCLEDAIADHEVLGA ESNVAAALADLGEDPPACGEGLPLLFVRVRAVAQIPALLARLGGPARSLLAGFVLPKFSEESGEAALEAVLRGSDTLGRL LWAMPVLESPQVIYRETRIETLTAVRRLVDKHADHVLAVRLGATDLSGVFGLRRDRDLTIYDIAVVRDCIADIVNICARG GDHVVTGPVWEYFAQPERLFVSSLRVTPFEEADLVDGSERGARIRTELVSADLDRLIREVVLDKANGLIGKTVIHPSHVP AVHALNVVTQEEYEDAEAVLEGDAGGVRPSSYANKMNELRPHRPWAQAVQRRARAFGVLREGLTFVDVLAATQDALR >Mature_397_residues MRHFSFLDGQTARTLFHRAPEEITTGGDRRLVATALGATLYAPGTRPRLASDVRRQVAAGVTSMVLCLEDAIADHEVLGA ESNVAAALADLGEDPPACGEGLPLLFVRVRAVAQIPALLARLGGPARSLLAGFVLPKFSEESGEAALEAVLRGSDTLGRL LWAMPVLESPQVIYRETRIETLTAVRRLVDKHADHVLAVRLGATDLSGVFGLRRDRDLTIYDIAVVRDCIADIVNICARG GDHVVTGPVWEYFAQPERLFVSSLRVTPFEEADLVDGSERGARIRTELVSADLDRLIREVVLDKANGLIGKTVIHPSHVP AVHALNVVTQEEYEDAEAVLEGDAGGVRPSSYANKMNELRPHRPWAQAVQRRARAFGVLREGLTFVDVLAATQDALR
Specific function: Unknown
COG id: COG2301
COG function: function code G; Citrate lyase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43058; Mature: 43058
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHFSFLDGQTARTLFHRAPEEITTGGDRRLVATALGATLYAPGTRPRLASDVRRQVAAG CCCCCCCCCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH VTSMVLCLEDAIADHEVLGAESNVAAALADLGEDPPACGEGLPLLFVRVRAVAQIPALLA HHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH RLGGPARSLLAGFVLPKFSEESGEAALEAVLRGSDTLGRLLWAMPVLESPQVIYRETRIE HHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHH TLTAVRRLVDKHADHVLAVRLGATDLSGVFGLRRDRDLTIYDIAVVRDCIADIVNICARG HHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHCC GDHVVTGPVWEYFAQPERLFVSSLRVTPFEEADLVDGSERGARIRTELVSADLDRLIREV CCEEEECHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VLDKANGLIGKTVIHPSHVPAVHALNVVTQEEYEDAEAVLEGDAGGVRPSSYANKMNELR HHHHCCCCEEHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC PHRPWAQAVQRRARAFGVLREGLTFVDVLAATQDALR CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC >Mature Secondary Structure MRHFSFLDGQTARTLFHRAPEEITTGGDRRLVATALGATLYAPGTRPRLASDVRRQVAAG CCCCCCCCCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH VTSMVLCLEDAIADHEVLGAESNVAAALADLGEDPPACGEGLPLLFVRVRAVAQIPALLA HHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH RLGGPARSLLAGFVLPKFSEESGEAALEAVLRGSDTLGRLLWAMPVLESPQVIYRETRIE HHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHH TLTAVRRLVDKHADHVLAVRLGATDLSGVFGLRRDRDLTIYDIAVVRDCIADIVNICARG HHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHCC GDHVVTGPVWEYFAQPERLFVSSLRVTPFEEADLVDGSERGARIRTELVSADLDRLIREV CCEEEECHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VLDKANGLIGKTVIHPSHVPAVHALNVVTQEEYEDAEAVLEGDAGGVRPSSYANKMNELR HHHHCCCCEEHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC PHRPWAQAVQRRARAFGVLREGLTFVDVLAATQDALR CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA