| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312892
Identifier: 158312892
GI number: 158312892
Start: 1218779
End: 1219294
Strand: Direct
Name: 158312892
Synonym: Franean1_1038
Alternate gene names: NA
Gene position: 1218779-1219294 (Clockwise)
Preceding gene: 158312891
Following gene: 158312893
Centisome position: 13.57
GC content: 73.84
Gene sequence:
>516_bases ATGGCCACGGTGGACAAGGACGCGCTGCGCGCATTCGGCCGTGAGGTGACGACCTTCCTGCCCGACCTGGTCGTGATGCT GCGCCGGGTGGTCGCCGACCCGCGGGTGCCGCAGTCCGCGAAGCTGGAGGCGGGAGCGGCGCTGGCCTACCTGGTGTCGC CGAAGAACCGGCTGACGAACATCATCCCGGTGATCGGCCAGCTCGATGACGTGGCCGTTGTGGCCTTCGCGTTCCGTCGC CTGGTGGTCGGGGCGGGTGAGCCGATCCTGCGGGAGCACTGGCGCGGCAGCGACCGCTCGTTCCACGCGCTCATCGGGGC GTCGTCGGCGCTGGCGAGCCCGGCGGGCATGCTCCGGCGGGCGAAGGTGGCCCGTACGCTGGCCGGCGCGGCGATCCACA GGGTCGGCCGCGGCGGGCGGGCGGGCGACGCCGGCGCGGAGCCGAGAACCGTCAAGGTCGTGGACGGCGAGGTCATCGGC CGTTCAGGGCCGGACGGCGGCTCCGGCGGTCACTGA
Upstream 100 bases:
>100_bases GGGCGGGTCGGCGGTCGTGTCTAGGATGTCGCCGGGCGCCGGGACGCCCCCGGCGGTCGGCGCCCGTGCCGGCTGCCCGT ACGCCCCGAGGAGGACGCCC
Downstream 100 bases:
>100_bases GGCCCGGTCGACGGCATGGGCGCGGGCAGAAATCCGGGCGCGGGGGAAAGCTCGGGCGGGGACGAGGACTGGGTCGTGCG GCCGGTGACCGGCGCCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MATVDKDALRAFGREVTTFLPDLVVMLRRVVADPRVPQSAKLEAGAALAYLVSPKNRLTNIIPVIGQLDDVAVVAFAFRR LVVGAGEPILREHWRGSDRSFHALIGASSALASPAGMLRRAKVARTLAGAAIHRVGRGGRAGDAGAEPRTVKVVDGEVIG RSGPDGGSGGH
Sequences:
>Translated_171_residues MATVDKDALRAFGREVTTFLPDLVVMLRRVVADPRVPQSAKLEAGAALAYLVSPKNRLTNIIPVIGQLDDVAVVAFAFRR LVVGAGEPILREHWRGSDRSFHALIGASSALASPAGMLRRAKVARTLAGAAIHRVGRGGRAGDAGAEPRTVKVVDGEVIG RSGPDGGSGGH >Mature_170_residues ATVDKDALRAFGREVTTFLPDLVVMLRRVVADPRVPQSAKLEAGAALAYLVSPKNRLTNIIPVIGQLDDVAVVAFAFRRL VVGAGEPILREHWRGSDRSFHALIGASSALASPAGMLRRAKVARTLAGAAIHRVGRGGRAGDAGAEPRTVKVVDGEVIGR SGPDGGSGGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17847; Mature: 17716
Theoretical pI: Translated: 11.53; Mature: 11.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVDKDALRAFGREVTTFLPDLVVMLRRVVADPRVPQSAKLEAGAALAYLVSPKNRLTN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHH IIPVIGQLDDVAVVAFAFRRLVVGAGEPILREHWRGSDRSFHALIGASSALASPAGMLRR HHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHCHHHHCCHHHHHHH AKVARTLAGAAIHRVGRGGRAGDAGAEPRTVKVVDGEVIGRSGPDGGSGGH HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCC >Mature Secondary Structure ATVDKDALRAFGREVTTFLPDLVVMLRRVVADPRVPQSAKLEAGAALAYLVSPKNRLTN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHH IIPVIGQLDDVAVVAFAFRRLVVGAGEPILREHWRGSDRSFHALIGASSALASPAGMLRR HHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHCHHHHCCHHHHHHH AKVARTLAGAAIHRVGRGGRAGDAGAEPRTVKVVDGEVIGRSGPDGGSGGH HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA