| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312887
Identifier: 158312887
GI number: 158312887
Start: 1212238
End: 1212870
Strand: Direct
Name: 158312887
Synonym: Franean1_1033
Alternate gene names: NA
Gene position: 1212238-1212870 (Clockwise)
Preceding gene: 158312886
Following gene: 158312888
Centisome position: 13.5
GC content: 73.78
Gene sequence:
>633_bases ATGCTGGACGTGGAGGTGCCCGCGGGGGTGGACCCAGCCGGTGGTCGGGCGGCCCGGCCGGGGGCCGCGGCCTGGACCCA GCAGCAGCGGCCGCTCCTCGTGGCCGCCTCCTTCGTGGTCGCAGTCGTGCTCGGGGTGGTCATCGGGCTCGTCTGGGCCT CCGACGACTCCGCCACGCCGGGCGCCGTCGCCGTCGAGCAGCCCGACGACGCGATCCTCAGCCCCCCGCTGCCCTCGGTC CCCTGGGAGACCAGCCGGGTCGCCGGCAGGGCGCGGACGCTGGCGCTCAAGGGCAACGAGCCCACGACCCTGCGCCAGCC GCTGATGTGGCTCGCCGCCTACGAGGTGCGCAAGAAGACCGGTGCCGCCACCCCGGTCGCGTCGGATGTCACGATCCCCA ACGGGATGTTCTACGGCGCCGTCGAGGGCGTCGACAAGGAACGCGACGAGTTCTGGGCCGTCGGGATGACCGAGATCCGT GGGGTCTCCGAAGCCGACGCCCCCGACCCGCATGTGTGGAAGCGCGTCGGCAGCGCTCCGTGGACCCTGGTCGGCCGCGG GACCGCGGCCTGCGACCTGATCCCCGTCGACCTGAAGAACATCTGGGGCCCGAGCGCCTGCTCCTCCGCCTGA
Upstream 100 bases:
>100_bases AGTGATCGGCAAGTCCCCGTTGGCGGGCGCCGAGCCGGCATAGGGCATGCTTTCCCGATAATCGGGCCGGGTCGTGGCAT GGTGGAGGTAAGACACAGAC
Downstream 100 bases:
>100_bases GGCCCGCCGCCACCCGCGTCCGCCGCCGTCGAGCCCTTCCGTCGCCTGAACGTCCGCCGCTGAACGGCAGCCGCCTGGAC GTCCAGCGTCTGGGTAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MLDVEVPAGVDPAGGRAARPGAAAWTQQQRPLLVAASFVVAVVLGVVIGLVWASDDSATPGAVAVEQPDDAILSPPLPSV PWETSRVAGRARTLALKGNEPTTLRQPLMWLAAYEVRKKTGAATPVASDVTIPNGMFYGAVEGVDKERDEFWAVGMTEIR GVSEADAPDPHVWKRVGSAPWTLVGRGTAACDLIPVDLKNIWGPSACSSA
Sequences:
>Translated_210_residues MLDVEVPAGVDPAGGRAARPGAAAWTQQQRPLLVAASFVVAVVLGVVIGLVWASDDSATPGAVAVEQPDDAILSPPLPSV PWETSRVAGRARTLALKGNEPTTLRQPLMWLAAYEVRKKTGAATPVASDVTIPNGMFYGAVEGVDKERDEFWAVGMTEIR GVSEADAPDPHVWKRVGSAPWTLVGRGTAACDLIPVDLKNIWGPSACSSA >Mature_210_residues MLDVEVPAGVDPAGGRAARPGAAAWTQQQRPLLVAASFVVAVVLGVVIGLVWASDDSATPGAVAVEQPDDAILSPPLPSV PWETSRVAGRARTLALKGNEPTTLRQPLMWLAAYEVRKKTGAATPVASDVTIPNGMFYGAVEGVDKERDEFWAVGMTEIR GVSEADAPDPHVWKRVGSAPWTLVGRGTAACDLIPVDLKNIWGPSACSSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21973; Mature: 21973
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDVEVPAGVDPAGGRAARPGAAAWTQQQRPLLVAASFVVAVVLGVVIGLVWASDDSATP CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GAVAVEQPDDAILSPPLPSVPWETSRVAGRARTLALKGNEPTTLRQPLMWLAAYEVRKKT CEEEEECCCCCEECCCCCCCCCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHC GAATPVASDVTIPNGMFYGAVEGVDKERDEFWAVGMTEIRGVSEADAPDPHVWKRVGSAP CCCCCCCCCCCCCCCEEEEECCCCCCCCHHEEECCHHHHCCCCCCCCCCHHHHHHHCCCC WTLVGRGTAACDLIPVDLKNIWGPSACSSA EEEEECCCCEEEEEECCHHHCCCCCCCCCC >Mature Secondary Structure MLDVEVPAGVDPAGGRAARPGAAAWTQQQRPLLVAASFVVAVVLGVVIGLVWASDDSATP CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GAVAVEQPDDAILSPPLPSVPWETSRVAGRARTLALKGNEPTTLRQPLMWLAAYEVRKKT CEEEEECCCCCEECCCCCCCCCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHC GAATPVASDVTIPNGMFYGAVEGVDKERDEFWAVGMTEIRGVSEADAPDPHVWKRVGSAP CCCCCCCCCCCCCCCEEEEECCCCCCCCHHEEECCHHHHCCCCCCCCCCHHHHHHHCCCC WTLVGRGTAACDLIPVDLKNIWGPSACSSA EEEEECCCCEEEEEECCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA