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The map label for this gene is atpF

Identifier: 158312874

GI number: 158312874

Start: 1200340

End: 1200921

Strand: Direct

Name: atpF

Synonym: Franean1_1020

Alternate gene names: 158312874

Gene position: 1200340-1200921 (Clockwise)

Preceding gene: 158312873

Following gene: 158312875

Centisome position: 13.36

GC content: 68.38

Gene sequence:

>582_bases
GTGCTGCAGAATCTAGTTCTAGCCGCCGCCGAAGAAGGCGCGGAACACGAGGACAGCGTCCTTGTGCCGCCGCTCGCCGA
GCTGATCGTCGGCCTGCTGGCCTTCGGTCTTCTCGTCGGATTCTTCTTCTGGAAGATCTACCCACAGATCCGTAAGACCT
ATGCCGAGCGGGCCGAACGTATCGAAGGTGGTCTCAACCGCGCCGAACGGGCGGAGCGCGAGGCACAGGCCCTGCTCGAG
CAGTACCGTTCCCAGCTCGCCGAAGCACGCTCGGAGGCGGCTCGCATCCGCGAGGACGCACAGGCACAGGGACGGCAGAT
CGTCGAGGAGCTGCGCACGCAGGTGCAGCAGGAGGTCGCCGAGATCCGCGAGCGGGCGGACGCGGCGCTGGTCGCGGAAC
GTGCCCAGGTCGTGGCCTCCGTGCGCCGTGAGATCGGTGAGATCGCGCTCGAGCTCGCGACCCGGATCGTCGGCCGCGAG
CTGGAGAACGACACCCGCCAGCGGCAGCTCGTCGACGACTTCATCGCGGGTCTCGACGAGGCTCCGCAGCCTGACGCCGT
CCCGGCCGGGCCGGGAGTCTGA

Upstream 100 bases:

>100_bases
GTGGCCTTCCGTTACATGCTGATCGGCTTCGCCGTCGTCGAGGCGCTCGCCCTCATCGGCTTCGTCGTGCCGTTCGTCTT
CACCTGATCCGGGGCGCCCT

Downstream 100 bases:

>100_bases
CGGTGGAGGGAGCCAGCCGGCAGTCGCTCGCCGCCGCCAGGTCGGTCCTCGACCAGGTGACGGCGGTGCCGATCGGCGCA
ACCGCCGGTACGGTCGCGCC

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLQNLVLAAAEEGAEHEDSVLVPPLAELIVGLLAFGLLVGFFFWKIYPQIRKTYAERAERIEGGLNRAERAEREAQALLE
QYRSQLAEARSEAARIREDAQAQGRQIVEELRTQVQQEVAEIRERADAALVAERAQVVASVRREIGEIALELATRIVGRE
LENDTRQRQLVDDFIAGLDEAPQPDAVPAGPGV

Sequences:

>Translated_193_residues
MLQNLVLAAAEEGAEHEDSVLVPPLAELIVGLLAFGLLVGFFFWKIYPQIRKTYAERAERIEGGLNRAERAEREAQALLE
QYRSQLAEARSEAARIREDAQAQGRQIVEELRTQVQQEVAEIRERADAALVAERAQVVASVRREIGEIALELATRIVGRE
LENDTRQRQLVDDFIAGLDEAPQPDAVPAGPGV
>Mature_193_residues
MLQNLVLAAAEEGAEHEDSVLVPPLAELIVGLLAFGLLVGFFFWKIYPQIRKTYAERAERIEGGLNRAERAEREAQALLE
QYRSQLAEARSEAARIREDAQAQGRQIVEELRTQVQQEVAEIRERADAALVAERAQVVASVRREIGEIALELATRIVGRE
LENDTRQRQLVDDFIAGLDEAPQPDAVPAGPGV

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_FRASN (A8L3W1)

Other databases:

- EMBL:   CP000820
- RefSeq:   YP_001505382.1
- ProteinModelPortal:   A8L3W1
- SMR:   A8L3W1
- GeneID:   5669434
- GenomeReviews:   CP000820_GR
- KEGG:   fre:Franean1_1020
- HOGENOM:   HBG617328
- OMA:   LEEYKQQ
- ProtClustDB:   PRK05759
- BioCyc:   FSP1855:FRANEAN1_1020-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 21433; Mature: 21433

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x18252d84)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQNLVLAAAEEGAEHEDSVLVPPLAELIVGLLAFGLLVGFFFWKIYPQIRKTYAERAER
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEGGLNRAERAEREAQALLEQYRSQLAEARSEAARIREDAQAQGRQIVEELRTQVQQEVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIRERADAALVAERAQVVASVRREIGEIALELATRIVGRELENDTRQRQLVDDFIAGLDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
APQPDAVPAGPGV
CCCCCCCCCCCCH
>Mature Secondary Structure
MLQNLVLAAAEEGAEHEDSVLVPPLAELIVGLLAFGLLVGFFFWKIYPQIRKTYAERAER
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEGGLNRAERAEREAQALLEQYRSQLAEARSEAARIREDAQAQGRQIVEELRTQVQQEVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIRERADAALVAERAQVVASVRREIGEIALELATRIVGRELENDTRQRQLVDDFIAGLDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
APQPDAVPAGPGV
CCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA