| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312791
Identifier: 158312791
GI number: 158312791
Start: 1095245
End: 1097077
Strand: Direct
Name: 158312791
Synonym: Franean1_0937
Alternate gene names: NA
Gene position: 1095245-1097077 (Clockwise)
Preceding gene: 158312790
Following gene: 158312795
Centisome position: 12.19
GC content: 75.89
Gene sequence:
>1833_bases GTGCCCAGCAGCGAGCGCGTGTATCCGGTCCGCAGCGGTGTCGCTCCCGACCGCGTTGCCACCGTCGCCGAGGCGCCGGC CGGCGCTCCCGTGCAGGCCGTCCCCGCCGGCAGGCCTCCCTCGGGCACCGTGACGACCACCGCGGCCGGGGATGCCATCG AGGCCGGGGTGGCCGGGGTGGCCGGGTCGGTCAGGGCGGTCGCGGAGCCCGGGCTGGCACAGGCGGTGGCCGTGCTCACC CGGCCCGACCTCGCCCACGTCGTCGACCTGGTCGCGTGGGTCGAGGACGGCTGGTTGCACGTCGCGAACGCCGACGGTGC GTCGCGCCTGCCGGTCGACGATCCGGACGGGCCGTGGGAGATCCTGCGTGGCCGGGACCCGGTCGCCGACCAGGACCCCA TGCACGGTGTTCCGCTGGTGGCCGCGCTCGCCGACCCGTCCCCGCCGGCCGCGCGCAACGCCTACCCCTTCGCGGGACGG CGCCTGCTGTCCATGTTCGCCGACCCGACGCGCTCGCCGGACATCGCCGTCGTCCACACCCCGCGGCACTACTGGCCCGA GCGGGGCGGCCATCTGGGGGAGCACGGCTCGCTGGACGCCGGGCAGTCCCGGGCGCCGCTCGTTCTGTCCGGGGCAGGTG TGACCGCCCGTGGCCTGCTGCCGCGGGTCGCCCGGGTGATCGACGTCGGTCCGACCCTGGCGGCGCTCGCCGGGGCGGCG ATGCCCGAGGCGGAGGGAACCGCGCTCGACGATCTCGCCGGGCCGGGAGCCCGGCATGTGGTCGGGCTGCTGTGGGACGG GACGAACTGCAACGACCTGCTCGACCTCGCCGCCCGGGGAGAGCTCCCGAACGTCGCCCGCCTGCTGGCCCGCGGCGTCG CGCTGACCGGCGGCGCCCTGGCCGAGTTCCCGAGCGTGACCCTCACCAACCACACCTCGGCGATCACCGGCGTCGGCCCC GGCCGGCACGGCATTCTGCACAACGTCTACTTCGACCGCGCGACCGACCGCCAGGTGATCACCAACGAGGCCGCGACCTG GCACGTCGCCTGCGACCAGCTCCGGGACGGCGTGTCGACGGTGTTCGAGGCGGTGGCCCGCTCCCGCCCCGGGACCGAGA CGGCCTGCGTGAACGAGCCGATCGACCGCGGGGCGAGCTACTCGACGTTCGGCCTGGTGCGAGCCCTCGGGGTCGGGCCG GGCGCCGGCGGTGCCGGTGCCGAGGCCGCCGGTGGCGGGATGGAGGACTACCTGCCGGCCGCCGAGGGCGACCCGCACGC GAGCGCCGAATGGGTCACCGCCGACCCGAACTACGCCTGGTCGACAAGGGTGGACGCGCTGGGGCTGACCCAGATCACCG ACCTGTGGGCCGACGGCCGGGAACCACCTGTGCTGACCTGGTGGAACACCACCATCACCGACACCGGTCATCACGGCGGC GGGCCCTACTCACCCGAGGCCCGCGCCGCGCTGGCCGACGCCGACCGCCGGCTGGGGGTGTTCCTCGACCTGGTGGAGCG CCGTGGCCTCACCGACCAGACGGCCATCCTGCTCACCGCCGACCACGGATTCGAGGCGGCCGACCCCGACTGCCGCGGTG ACTGGGACGTCGCCCTGCACCGCGCCGGGGTGGTCTTCCGGGACGAGGGCTACGGCTTCATCTACCTGGGCCTCGCCGGC GACGACGAAGCCCCGGCCGACTCCGCTGATCCGGGCAGCCCGGCCAACCTCGGAGACCGGGCCACGCCAGGTGGCCCGGC GGGCCAGGGTGGGCCGGGCGGCTCGGGGGCCCAGGCAACGGCCTCCCTGCCGCCGCAGCCGCCAGGCACCTGA
Upstream 100 bases:
>100_bases AGGCGGGGCGGGGGCGGGACGCCGACTCGTCGGCGTCCCGCCCCGTGGAGTTGGCATGTGCTTCTCCTGGTGGTGCGGTC GGCGCCGGTAGTGTGCGAGC
Downstream 100 bases:
>100_bases GCTCCCGCCCGGACCGGGGCCCGCCAGCCCGGCCCGGGTTGGACCCCGGGCTCGGCCTGGGCCCTCCTGCCTTAGGGCAG TTAGGGCAATAGTGCATGTC
Product: type I phosphodiesterase/nucleotide pyrophosphatase
Products: NA
Alternate protein names: Nucleotide Pyrophosphatase
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MPSSERVYPVRSGVAPDRVATVAEAPAGAPVQAVPAGRPPSGTVTTTAAGDAIEAGVAGVAGSVRAVAEPGLAQAVAVLT RPDLAHVVDLVAWVEDGWLHVANADGASRLPVDDPDGPWEILRGRDPVADQDPMHGVPLVAALADPSPPAARNAYPFAGR RLLSMFADPTRSPDIAVVHTPRHYWPERGGHLGEHGSLDAGQSRAPLVLSGAGVTARGLLPRVARVIDVGPTLAALAGAA MPEAEGTALDDLAGPGARHVVGLLWDGTNCNDLLDLAARGELPNVARLLARGVALTGGALAEFPSVTLTNHTSAITGVGP GRHGILHNVYFDRATDRQVITNEAATWHVACDQLRDGVSTVFEAVARSRPGTETACVNEPIDRGASYSTFGLVRALGVGP GAGGAGAEAAGGGMEDYLPAAEGDPHASAEWVTADPNYAWSTRVDALGLTQITDLWADGREPPVLTWWNTTITDTGHHGG GPYSPEARAALADADRRLGVFLDLVERRGLTDQTAILLTADHGFEAADPDCRGDWDVALHRAGVVFRDEGYGFIYLGLAG DDEAPADSADPGSPANLGDRATPGGPAGQGGPGGSGAQATASLPPQPPGT
Sequences:
>Translated_610_residues MPSSERVYPVRSGVAPDRVATVAEAPAGAPVQAVPAGRPPSGTVTTTAAGDAIEAGVAGVAGSVRAVAEPGLAQAVAVLT RPDLAHVVDLVAWVEDGWLHVANADGASRLPVDDPDGPWEILRGRDPVADQDPMHGVPLVAALADPSPPAARNAYPFAGR RLLSMFADPTRSPDIAVVHTPRHYWPERGGHLGEHGSLDAGQSRAPLVLSGAGVTARGLLPRVARVIDVGPTLAALAGAA MPEAEGTALDDLAGPGARHVVGLLWDGTNCNDLLDLAARGELPNVARLLARGVALTGGALAEFPSVTLTNHTSAITGVGP GRHGILHNVYFDRATDRQVITNEAATWHVACDQLRDGVSTVFEAVARSRPGTETACVNEPIDRGASYSTFGLVRALGVGP GAGGAGAEAAGGGMEDYLPAAEGDPHASAEWVTADPNYAWSTRVDALGLTQITDLWADGREPPVLTWWNTTITDTGHHGG GPYSPEARAALADADRRLGVFLDLVERRGLTDQTAILLTADHGFEAADPDCRGDWDVALHRAGVVFRDEGYGFIYLGLAG DDEAPADSADPGSPANLGDRATPGGPAGQGGPGGSGAQATASLPPQPPGT >Mature_609_residues PSSERVYPVRSGVAPDRVATVAEAPAGAPVQAVPAGRPPSGTVTTTAAGDAIEAGVAGVAGSVRAVAEPGLAQAVAVLTR PDLAHVVDLVAWVEDGWLHVANADGASRLPVDDPDGPWEILRGRDPVADQDPMHGVPLVAALADPSPPAARNAYPFAGRR LLSMFADPTRSPDIAVVHTPRHYWPERGGHLGEHGSLDAGQSRAPLVLSGAGVTARGLLPRVARVIDVGPTLAALAGAAM PEAEGTALDDLAGPGARHVVGLLWDGTNCNDLLDLAARGELPNVARLLARGVALTGGALAEFPSVTLTNHTSAITGVGPG RHGILHNVYFDRATDRQVITNEAATWHVACDQLRDGVSTVFEAVARSRPGTETACVNEPIDRGASYSTFGLVRALGVGPG AGGAGAEAAGGGMEDYLPAAEGDPHASAEWVTADPNYAWSTRVDALGLTQITDLWADGREPPVLTWWNTTITDTGHHGGG PYSPEARAALADADRRLGVFLDLVERRGLTDQTAILLTADHGFEAADPDCRGDWDVALHRAGVVFRDEGYGFIYLGLAGD DEAPADSADPGSPANLGDRATPGGPAGQGGPGGSGAQATASLPPQPPGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62455; Mature: 62324
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSERVYPVRSGVAPDRVATVAEAPAGAPVQAVPAGRPPSGTVTTTAAGDAIEAGVAGV CCCCCCEEEHHCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHH AGSVRAVAEPGLAQAVAVLTRPDLAHVVDLVAWVEDGWLHVANADGASRLPVDDPDGPWE CCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHH ILRGRDPVADQDPMHGVPLVAALADPSPPAARNAYPFAGRRLLSMFADPTRSPDIAVVHT HHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEC PRHYWPERGGHLGEHGSLDAGQSRAPLVLSGAGVTARGLLPRVARVIDVGPTLAALAGAA CHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCC MPEAEGTALDDLAGPGARHVVGLLWDGTNCNDLLDLAARGELPNVARLLARGVALTGGAL CCCCCCCCHHHHCCCCCHHEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHH AEFPSVTLTNHTSAITGVGPGRHGILHNVYFDRATDRQVITNEAATWHVACDQLRDGVST HHCCCEEEECCCCEEECCCCCCCCCEEEEEECCCCCCHHHHCCCCEEEHHHHHHHHHHHH VFEAVARSRPGTETACVNEPIDRGASYSTFGLVRALGVGPGAGGAGAEAAGGGMEDYLPA HHHHHHHCCCCCCCHHCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCC AEGDPHASAEWVTADPNYAWSTRVDALGLTQITDLWADGREPPVLTWWNTTITDTGHHGG CCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCEECCCCCCCC GPYSPEARAALADADRRLGVFLDLVERRGLTDQTAILLTADHGFEAADPDCRGDWDVALH CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHEE RAGVVFRDEGYGFIYLGLAGDDEAPADSADPGSPANLGDRATPGGPAGQGGPGGSGAQAT CCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE ASLPPQPPGT CCCCCCCCCC >Mature Secondary Structure PSSERVYPVRSGVAPDRVATVAEAPAGAPVQAVPAGRPPSGTVTTTAAGDAIEAGVAGV CCCCCEEEHHCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHH AGSVRAVAEPGLAQAVAVLTRPDLAHVVDLVAWVEDGWLHVANADGASRLPVDDPDGPWE CCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHH ILRGRDPVADQDPMHGVPLVAALADPSPPAARNAYPFAGRRLLSMFADPTRSPDIAVVHT HHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEC PRHYWPERGGHLGEHGSLDAGQSRAPLVLSGAGVTARGLLPRVARVIDVGPTLAALAGAA CHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCC MPEAEGTALDDLAGPGARHVVGLLWDGTNCNDLLDLAARGELPNVARLLARGVALTGGAL CCCCCCCCHHHHCCCCCHHEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHH AEFPSVTLTNHTSAITGVGPGRHGILHNVYFDRATDRQVITNEAATWHVACDQLRDGVST HHCCCEEEECCCCEEECCCCCCCCCEEEEEECCCCCCHHHHCCCCEEEHHHHHHHHHHHH VFEAVARSRPGTETACVNEPIDRGASYSTFGLVRALGVGPGAGGAGAEAAGGGMEDYLPA HHHHHHHCCCCCCCHHCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCC AEGDPHASAEWVTADPNYAWSTRVDALGLTQITDLWADGREPPVLTWWNTTITDTGHHGG CCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCEECCCCCCCC GPYSPEARAALADADRRLGVFLDLVERRGLTDQTAILLTADHGFEAADPDCRGDWDVALH CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHEE RAGVVFRDEGYGFIYLGLAGDDEAPADSADPGSPANLGDRATPGGPAGQGGPGGSGAQAT CCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE ASLPPQPPGT CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA