Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158312786

Identifier: 158312786

GI number: 158312786

Start: 1088530

End: 1089897

Strand: Direct

Name: 158312786

Synonym: Franean1_0932

Alternate gene names: NA

Gene position: 1088530-1089897 (Clockwise)

Preceding gene: 158312785

Following gene: 158312789

Centisome position: 12.12

GC content: 74.78

Gene sequence:

>1368_bases
ATGGTGACGACGACCGCTGCGACCACGGCCGAGATCTCCGCGCCCGCCGAGGCCGGGTCGAAGATCCCGGCGGTGATCCC
GACCGTTCCGCGTGAGCTGCCGGCCGTCGTGCGGCGCACACTGCCCAACGGCCTGCGCGTGGACGTCGTCGCCCGCTCCA
GCGTCCCGCTGGTCGAGCTGCGGCTGCGCATCCCGTTCGCCGGGTCCGGGCTGGTCCACCTGGCAGAGGCCGAGCTGCTG
GCGGAGACCATCCTCACCGGCTCGAGCCGGTACGACCGGGTCGGCCTGGCCACCGCCGTGCAGGCCCTGGGCGGGTCGCT
GCGGACCGGTGTCGACGCCGACCGGCTGGCGATCGTCAGCTCCGCGCTCGCGACCAGCCTCGAGCCGCTGCTCGCGCTGA
TCGCCGACGTTCTGACCACCGCGAGCTACCCCGACAGCGAGTTCGGCGGTGAGCGCGACCGGATCGTCGAGGAGACGACG
ATCGCGCTCAGCCAGCCGGCGGTGATCGCCCGTGAGGCGCTGGTGCGCCGGATGTTCGGCGACCACCCCTACGGCAGCGC
CATCACCCCGCCGTCGGTGCTCTCCGAGGTCGGGGCCGAGCGGGTGCGGTCGCTGCACGGCGCCCGGGTCTGCCCGGACG
GCGCCATCCTCACCCTGGTCGGCGACGTCGACCCCGAGCGCGCGCTGGACGCCGTCGAGGCCGCGCTCGGGTCGTGGACG
GGCACCGCCGCCCCGGGCCACCCGCCCGCGCCCGTGCCCACCGCCGGCCCGATCCTGATCGTCGACCGCCCGGGCGCGGT
GCAGACGAACATCAGGATGGGCGGCCGCGCGCTGAACCGCTCCGCGCCGGCCCATCCCGCGCTCCGGCTCGCGAGCACGA
TCTTCGGCGGCTACTTCAGCTCTCGGCTCGTCTCCAACATCCGCGAGGACAAGGGGTACACGTACTCCCCGCGCAGCTCG
GTCGACCACCACCAGGCCGGCTCCCGCCTCACCGTCGCTGCGGACGTCTCCACCGACGTGACCGGCCCGGCGCTGCTCGA
GATCCTCTACGAGCTCGGCCGGATGGCCGTCCTGCCGCCGGAGGCCGAGGAGCTCGAGGCCGCGCGCCAGTACCTGATCG
GCACGCTGGCGCTGTCGAGCGCGACCGCGGCCGGTCTCGCCGGCACCCTGTCCGGGCTGTCCGGCGCCGGGGTCGGCGTC
GAGTACCTGCGCGACCATCCGCGGGCGCTCGCGACCGTCACCGCGGCGGACGTCCAGGCGGTCTCCGCGCAGCTGCTGGC
TCCGTCGGGGCTGGTGACCGTGCTGGTGGGGGACGCCTCGAAGATCACCGAGTCGGTGCGGGCACTCGGAGCCGTCGAGT
CCGCCTGA

Upstream 100 bases:

>100_bases
TCCGTGCTGGAGCTGCGGGCGGGAGCCGCCTGATGGCGCACGCCGGGCCGGTGAGCGAGATGATCCGCGGTGGCATCCCC
CGTCCGGGGGACGAGGAGGC

Downstream 100 bases:

>100_bases
GTGACGGTGCTCCCCAGCGGACGGCGCTCACCGGTGGGCATGACGGGATCGTGGCCGGGCGCCTTCGGGGCGGTGCCGGT
CAGGTCAGTGGTGGCGGTGG

Product: peptidase M16 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MVTTTAATTAEISAPAEAGSKIPAVIPTVPRELPAVVRRTLPNGLRVDVVARSSVPLVELRLRIPFAGSGLVHLAEAELL
AETILTGSSRYDRVGLATAVQALGGSLRTGVDADRLAIVSSALATSLEPLLALIADVLTTASYPDSEFGGERDRIVEETT
IALSQPAVIAREALVRRMFGDHPYGSAITPPSVLSEVGAERVRSLHGARVCPDGAILTLVGDVDPERALDAVEAALGSWT
GTAAPGHPPAPVPTAGPILIVDRPGAVQTNIRMGGRALNRSAPAHPALRLASTIFGGYFSSRLVSNIREDKGYTYSPRSS
VDHHQAGSRLTVAADVSTDVTGPALLEILYELGRMAVLPPEAEELEAARQYLIGTLALSSATAAGLAGTLSGLSGAGVGV
EYLRDHPRALATVTAADVQAVSAQLLAPSGLVTVLVGDASKITESVRALGAVESA

Sequences:

>Translated_455_residues
MVTTTAATTAEISAPAEAGSKIPAVIPTVPRELPAVVRRTLPNGLRVDVVARSSVPLVELRLRIPFAGSGLVHLAEAELL
AETILTGSSRYDRVGLATAVQALGGSLRTGVDADRLAIVSSALATSLEPLLALIADVLTTASYPDSEFGGERDRIVEETT
IALSQPAVIAREALVRRMFGDHPYGSAITPPSVLSEVGAERVRSLHGARVCPDGAILTLVGDVDPERALDAVEAALGSWT
GTAAPGHPPAPVPTAGPILIVDRPGAVQTNIRMGGRALNRSAPAHPALRLASTIFGGYFSSRLVSNIREDKGYTYSPRSS
VDHHQAGSRLTVAADVSTDVTGPALLEILYELGRMAVLPPEAEELEAARQYLIGTLALSSATAAGLAGTLSGLSGAGVGV
EYLRDHPRALATVTAADVQAVSAQLLAPSGLVTVLVGDASKITESVRALGAVESA
>Mature_455_residues
MVTTTAATTAEISAPAEAGSKIPAVIPTVPRELPAVVRRTLPNGLRVDVVARSSVPLVELRLRIPFAGSGLVHLAEAELL
AETILTGSSRYDRVGLATAVQALGGSLRTGVDADRLAIVSSALATSLEPLLALIADVLTTASYPDSEFGGERDRIVEETT
IALSQPAVIAREALVRRMFGDHPYGSAITPPSVLSEVGAERVRSLHGARVCPDGAILTLVGDVDPERALDAVEAALGSWT
GTAAPGHPPAPVPTAGPILIVDRPGAVQTNIRMGGRALNRSAPAHPALRLASTIFGGYFSSRLVSNIREDKGYTYSPRSS
VDHHQAGSRLTVAADVSTDVTGPALLEILYELGRMAVLPPEAEELEAARQYLIGTLALSSATAAGLAGTLSGLSGAGVGV
EYLRDHPRALATVTAADVQAVSAQLLAPSGLVTVLVGDASKITESVRALGAVESA

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR001431
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 46820; Mature: 46820

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTTTAATTAEISAPAEAGSKIPAVIPTVPRELPAVVRRTLPNGLRVDVVARSSVPLVEL
CCCCCCCCCCCCCCCHHCCCCCCEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEE
RLRIPFAGSGLVHLAEAELLAETILTGSSRYDRVGLATAVQALGGSLRTGVDADRLAIVS
EEECCCCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHH
SALATSLEPLLALIADVLTTASYPDSEFGGERDRIVEETTIALSQPAVIAREALVRRMFG
HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
DHPYGSAITPPSVLSEVGAERVRSLHGARVCPDGAILTLVGDVDPERALDAVEAALGSWT
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC
GTAAPGHPPAPVPTAGPILIVDRPGAVQTNIRMGGRALNRSAPAHPALRLASTIFGGYFS
CCCCCCCCCCCCCCCCCEEEEECCCCEEECCEECCHHHCCCCCCCHHHHHHHHHHHHHHH
SRLVSNIREDKGYTYSPRSSVDHHQAGSRLTVAADVSTDVTGPALLEILYELGRMAVLPP
HHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEECCC
EAEELEAARQYLIGTLALSSATAAGLAGTLSGLSGAGVGVEYLRDHPRALATVTAADVQA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHH
VSAQLLAPSGLVTVLVGDASKITESVRALGAVESA
HHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVTTTAATTAEISAPAEAGSKIPAVIPTVPRELPAVVRRTLPNGLRVDVVARSSVPLVEL
CCCCCCCCCCCCCCCHHCCCCCCEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEE
RLRIPFAGSGLVHLAEAELLAETILTGSSRYDRVGLATAVQALGGSLRTGVDADRLAIVS
EEECCCCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHH
SALATSLEPLLALIADVLTTASYPDSEFGGERDRIVEETTIALSQPAVIAREALVRRMFG
HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
DHPYGSAITPPSVLSEVGAERVRSLHGARVCPDGAILTLVGDVDPERALDAVEAALGSWT
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC
GTAAPGHPPAPVPTAGPILIVDRPGAVQTNIRMGGRALNRSAPAHPALRLASTIFGGYFS
CCCCCCCCCCCCCCCCCEEEEECCCCEEECCEECCHHHCCCCCCCHHHHHHHHHHHHHHH
SRLVSNIREDKGYTYSPRSSVDHHQAGSRLTVAADVSTDVTGPALLEILYELGRMAVLPP
HHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEECCC
EAEELEAARQYLIGTLALSSATAAGLAGTLSGLSGAGVGVEYLRDHPRALATVTAADVQA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHH
VSAQLLAPSGLVTVLVGDASKITESVRALGAVESA
HHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]