| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312669
Identifier: 158312669
GI number: 158312669
Start: 952134
End: 952931
Strand: Direct
Name: 158312669
Synonym: Franean1_0813
Alternate gene names: NA
Gene position: 952134-952931 (Clockwise)
Preceding gene: 158312667
Following gene: 158312672
Centisome position: 10.6
GC content: 70.8
Gene sequence:
>798_bases ATGGCAGAGCTGCGTTCATCCAACCCGGCGTTCACCCGGTCGGGCTTCGGTCAGAGCCGTTCGCCAGTCCCGCCGGCCGG TCCCTGGCCGCAGGGCGGCCCTGCTCCGTGGCCGGGTGGCCCGCCGCCCACCCCGGTGCACGACAGGCTGACCTTCGACG ACGTCGTCATGCACACGCTCGGCGTGTTCGCGGTGATGCTGGTCGGCGCGGGTTTCGGCTGGTACCTCTCGCCCGACTCG CCGGGCATCGCGCTCGGGGCCGGTGTCGCGGCGCTCGCGCTGAGCTTCGTCATCTCGCTCCGCAGCCGGATCAGCCCGCC GCTCGTGGTGGTCTTCGCCGTGCTGGAGGGCCTGCTCGTCGGCGGGGTCTCGCGGTTCTACGAGTCCGCGTTCTCGGGCA TCGTGCTCCAGGCGCTGCTCGGCACCGCGCTGGTGTTCATCGCCATGCTGGTCGCCTACCGCAGTCGGCGGCTCCGAGCC ACCCCCCGCATGGCGCGGATCGTCACGGGCGCTCTACTGGGCGTGGTGCTGCTCGGCGTCACCGACCTCGTCATCAGGGC CGTGTCCGGCAGTCACCTGCCCGTGATCAACGACGCGTCGCCGCTGGGCATCCTGTTCAGCATCGCGGTGCTCGTGGTGG CCAGCCTGCAGTTCATCCTCGACTTCGACTACATCGAGCGGGCGGTCGCCTCCGGCGCGCCTCGCGAGGAGGCCTGGCGG GCCGCGTTCGGTCTGCTGATCGGCTTCGTGTGGGTGTACCTGGAGCTGCTGCGCCTGCTTTCCAAGCTCCGCCAGTAG
Upstream 100 bases:
>100_bases CGCGCAGGGTGCGGAACGGTCGTCATCCGGTGGTCGTTGTACTGTGCGATCGCGTGCGGCAGGTGGCCCGTCCGCGACTC GCTGGGGAGGTCCAGGCCCG
Downstream 100 bases:
>100_bases CCCCGTACACTCCGGCAGCAGCCCCGGCGGGCTGGTCCCGGCCCTCGGCCGCCGTACGCGGCAGAGGGCGCATGGTGGTG GCCTCAGCCGGAGCGGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Permease Of Facilitator Superfamily Protein; Membrane Spanning Protein
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MAELRSSNPAFTRSGFGQSRSPVPPAGPWPQGGPAPWPGGPPPTPVHDRLTFDDVVMHTLGVFAVMLVGAGFGWYLSPDS PGIALGAGVAALALSFVISLRSRISPPLVVVFAVLEGLLVGGVSRFYESAFSGIVLQALLGTALVFIAMLVAYRSRRLRA TPRMARIVTGALLGVVLLGVTDLVIRAVSGSHLPVINDASPLGILFSIAVLVVASLQFILDFDYIERAVASGAPREEAWR AAFGLLIGFVWVYLELLRLLSKLRQ
Sequences:
>Translated_265_residues MAELRSSNPAFTRSGFGQSRSPVPPAGPWPQGGPAPWPGGPPPTPVHDRLTFDDVVMHTLGVFAVMLVGAGFGWYLSPDS PGIALGAGVAALALSFVISLRSRISPPLVVVFAVLEGLLVGGVSRFYESAFSGIVLQALLGTALVFIAMLVAYRSRRLRA TPRMARIVTGALLGVVLLGVTDLVIRAVSGSHLPVINDASPLGILFSIAVLVVASLQFILDFDYIERAVASGAPREEAWR AAFGLLIGFVWVYLELLRLLSKLRQ >Mature_264_residues AELRSSNPAFTRSGFGQSRSPVPPAGPWPQGGPAPWPGGPPPTPVHDRLTFDDVVMHTLGVFAVMLVGAGFGWYLSPDSP GIALGAGVAALALSFVISLRSRISPPLVVVFAVLEGLLVGGVSRFYESAFSGIVLQALLGTALVFIAMLVAYRSRRLRAT PRMARIVTGALLGVVLLGVTDLVIRAVSGSHLPVINDASPLGILFSIAVLVVASLQFILDFDYIERAVASGAPREEAWRA AFGLLIGFVWVYLELLRLLSKLRQ
Specific function: Unknown
COG id: COG4760
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28110; Mature: 27979
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELRSSNPAFTRSGFGQSRSPVPPAGPWPQGGPAPWPGGPPPTPVHDRLTFDDVVMHTL CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH GVFAVMLVGAGFGWYLSPDSPGIALGAGVAALALSFVISLRSRISPPLVVVFAVLEGLLV HHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GGVSRFYESAFSGIVLQALLGTALVFIAMLVAYRSRRLRATPRMARIVTGALLGVVLLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TDLVIRAVSGSHLPVINDASPLGILFSIAVLVVASLQFILDFDYIERAVASGAPREEAWR HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AAFGLLIGFVWVYLELLRLLSKLRQ HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AELRSSNPAFTRSGFGQSRSPVPPAGPWPQGGPAPWPGGPPPTPVHDRLTFDDVVMHTL CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH GVFAVMLVGAGFGWYLSPDSPGIALGAGVAALALSFVISLRSRISPPLVVVFAVLEGLLV HHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GGVSRFYESAFSGIVLQALLGTALVFIAMLVAYRSRRLRATPRMARIVTGALLGVVLLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TDLVIRAVSGSHLPVINDASPLGILFSIAVLVVASLQFILDFDYIERAVASGAPREEAWR HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AAFGLLIGFVWVYLELLRLLSKLRQ HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA