| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is aroB [H]
Identifier: 158312666
GI number: 158312666
Start: 948112
End: 949068
Strand: Direct
Name: aroB [H]
Synonym: Franean1_0810
Alternate gene names: 158312666
Gene position: 948112-949068 (Clockwise)
Preceding gene: 158312665
Following gene: 158312667
Centisome position: 10.56
GC content: 73.56
Gene sequence:
>957_bases ATGACCCGCGTGGCCGCGATCGACTGTGGCACCAACTCCATCCGACTGCTCGTGGCCGAGCTCGACGAGGGGGCGGCCGG CTCCGGTGGGCGGCTGCGCGAGCTGATCCGCCGGATGGAGATCGTCCGGCTCGGCGCCGGCGTCGACCGCACCGGTGAGC TGGCGCCCGAGGCGCTGGCCCGGACGTTCACCGCGCTGCGCGACTACTCCGACGAGATCACCCGGCTCGGCGCGACCCGC GTCCGGATGGTCGCCACCAGCGCCACCCGGGACGCGCGCAACCGTGCCGAGCTGGTGGACGGCGTCCGCGCGATCCTGGG TGTCGACCCCGAGGTGATCAGCGGTGGCGAGGAGGCTGCGCTCTCCTTCGCCGGCGCGATCGGCGACCTCGACGGGGTCG CGACTCCGATCCTGCTGGCCGACATCGGCGGCGGCTCGACCGAGCTGGTGCTCGGCGGCGCCGAGGGCGTGCGGGAGTCG ATTTCGGTCAACGTGGGCTGCGTCCGCATGGCGGAACGCCACCTGCACTCCGATCCGCCGGCACCGGAGCAGATCGCCGC GATCGTCGCCGACGTCCACGCGGCGTTCGACCTGGCCGAGCGCACCGTGCCCATCACCACCGCCGCCACCCTGGTCGGTG TCGCCGGGACGGTGACCACCGTCGCGGCGCTGGCGGCCGACCTGCCCACCTACGACCCCGACCGCATCCACCTGATGGTC ACCTCGGCCGCCGACGTGGCCGCCGTCACCGCGAGCCTGCTCGAAATGACCCACGCCCAGCGCGCCGCGCTGCCGGTGAT GCACCCCGGGCGGGTGGACGTCATCGCCGCCGGCGCACTGGTGCTGCGGACCCTCATGGAGCGGTCCGGAACCTCCATGG TGATCGCGAGCGAGCGGGACATCCTCGACGGCATCGCACTCTCGCTGGGCGGAGTGGTCGAGTCCGGGGCTCGGTGA
Upstream 100 bases:
>100_bases GGCCGTGCGTCGAGCCGGACGGCGCATCCTGTGCGGGGGAACCGGGGGGCTCGCGCGGCCATGCGGCACGCGTCGGCCAG GGACGAGAGGAGACCGCCGG
Downstream 100 bases:
>100_bases ATCTGCCGGGCTCGGGCTGGCCCGGAGACCCGGCCGTCCCGGGCACGCCCGTCGCCCGTTCCGGGCCGGAGGTGGCGACC CTCGCTGGGACGGCGCCGGA
Product: Ppx/GppA phosphatase
Products: NA
Alternate protein names: 3-dehydroquinate synthase; Unknown phosphatase [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTRVAAIDCGTNSIRLLVAELDEGAAGSGGRLRELIRRMEIVRLGAGVDRTGELAPEALARTFTALRDYSDEITRLGATR VRMVATSATRDARNRAELVDGVRAILGVDPEVISGGEEAALSFAGAIGDLDGVATPILLADIGGGSTELVLGGAEGVRES ISVNVGCVRMAERHLHSDPPAPEQIAAIVADVHAAFDLAERTVPITTAATLVGVAGTVTTVAALAADLPTYDPDRIHLMV TSAADVAAVTASLLEMTHAQRAALPVMHPGRVDVIAAGALVLRTLMERSGTSMVIASERDILDGIALSLGGVVESGAR
Sequences:
>Translated_318_residues MTRVAAIDCGTNSIRLLVAELDEGAAGSGGRLRELIRRMEIVRLGAGVDRTGELAPEALARTFTALRDYSDEITRLGATR VRMVATSATRDARNRAELVDGVRAILGVDPEVISGGEEAALSFAGAIGDLDGVATPILLADIGGGSTELVLGGAEGVRES ISVNVGCVRMAERHLHSDPPAPEQIAAIVADVHAAFDLAERTVPITTAATLVGVAGTVTTVAALAADLPTYDPDRIHLMV TSAADVAAVTASLLEMTHAQRAALPVMHPGRVDVIAAGALVLRTLMERSGTSMVIASERDILDGIALSLGGVVESGAR >Mature_317_residues TRVAAIDCGTNSIRLLVAELDEGAAGSGGRLRELIRRMEIVRLGAGVDRTGELAPEALARTFTALRDYSDEITRLGATRV RMVATSATRDARNRAELVDGVRAILGVDPEVISGGEEAALSFAGAIGDLDGVATPILLADIGGGSTELVLGGAEGVRESI SVNVGCVRMAERHLHSDPPAPEQIAAIVADVHAAFDLAERTVPITTAATLVGVAGTVTTVAALAADLPTYDPDRIHLMVT SAADVAAVTASLLEMTHAQRAALPVMHPGRVDVIAAGALVLRTLMERSGTSMVIASERDILDGIALSLGGVVESGAR
Specific function: Conversion Of Pppgpp To Ppgpp. Guanosine Pentaphosphate (Pppgpp) Is A Cytoplasmic Signaling Molecule Which Together With Ppgpp Controls The "Stringent Response", An Adaptive Process That Allows Bacteria To Respond To Amino Acid Starvation, Resulting In T
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI48994966, Length=172, Percent_Identity=36.6279069767442, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788848, Length=174, Percent_Identity=31.0344827586207, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002658 - InterPro: IPR016037 - InterPro: IPR003695 [H]
Pfam domain/function: PF01761 DHQ_synthase; PF02541 Ppx-GppA [H]
EC number: =4.2.3.4 [H]
Molecular weight: Translated: 32749; Mature: 32618
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVAAIDCGTNSIRLLVAELDEGAAGSGGRLRELIRRMEIVRLGAGVDRTGELAPEALA CCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH RTFTALRDYSDEITRLGATRVRMVATSATRDARNRAELVDGVRAILGVDPEVISGGEEAA HHHHHHHHHHHHHHHHCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHH LSFAGAIGDLDGVATPILLADIGGGSTELVLGGAEGVRESISVNVGCVRMAERHLHSDPP HHHHHHHCCCCHHHCCEEEEECCCCCEEEEEECHHHHHHHHHCCHHHHHHHHHHHCCCCC APEQIAAIVADVHAAFDLAERTVPITTAATLVGVAGTVTTVAALAADLPTYDPDRIHLMV CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE TSAADVAAVTASLLEMTHAQRAALPVMHPGRVDVIAAGALVLRTLMERSGTSMVIASERD ECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHH ILDGIALSLGGVVESGAR HHHHHHHHHHHHHCCCCC >Mature Secondary Structure TRVAAIDCGTNSIRLLVAELDEGAAGSGGRLRELIRRMEIVRLGAGVDRTGELAPEALA CEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH RTFTALRDYSDEITRLGATRVRMVATSATRDARNRAELVDGVRAILGVDPEVISGGEEAA HHHHHHHHHHHHHHHHCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHH LSFAGAIGDLDGVATPILLADIGGGSTELVLGGAEGVRESISVNVGCVRMAERHLHSDPP HHHHHHHCCCCHHHCCEEEEECCCCCEEEEEECHHHHHHHHHCCHHHHHHHHHHHCCCCC APEQIAAIVADVHAAFDLAERTVPITTAATLVGVAGTVTTVAALAADLPTYDPDRIHLMV CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE TSAADVAAVTASLLEMTHAQRAALPVMHPGRVDVIAAGALVLRTLMERSGTSMVIASERD ECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHH ILDGIALSLGGVVESGAR HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11889109 [H]