| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312665
Identifier: 158312665
GI number: 158312665
Start: 947579
End: 948115
Strand: Direct
Name: 158312665
Synonym: Franean1_0809
Alternate gene names: NA
Gene position: 947579-948115 (Clockwise)
Preceding gene: 158312664
Following gene: 158312666
Centisome position: 10.55
GC content: 77.09
Gene sequence:
>537_bases GTGCACCGCCAGCTCGGCCGTCCGCCGCGGGCCGTGCTCGGCGTCGCGCACCGCTGTTCGTGCGGGCTGCCGGACGTCGT GGAGACAGCCCCGCGGCTCGAGGACGGCACGCCGTTCCCGACGCTGTTCTACCTGACCTGCCCGCGGGCGGCGGCGGCGA TCTCGCGGCTGGAGGGCTCCGGCCTCATGCGGGAGATGACCGCGCGGCTGGGGACCGATCCCGGGCTCGCCGCCGCCTAC CGCGCCGCCCACCGCGACTACCTGGCGCGCCGCGACGCCCACGGAACCCTGCCCGGGGACCCGAGCGCCGGTGGGATGCC CGACCGGGTCAAGTGCCTGCACGTGCTGGTCGCCCACAGCCTGGCCGCCGGCCCGGGAGTCAACCCGTTCGGTGACGAGG CTCTCGCTCAGCTCGCCGACTGGGGGGCCCGCGGGCCGTGCGTCGAGCCGGACGGCGCATCCTGTGCGGGGGAACCGGGG GGCTCGCGCGGCCATGCGGCACGCGTCGGCCAGGGACGAGAGGAGACCGCCGGATGA
Upstream 100 bases:
>100_bases CCTCGTGAGCGGCGGCGTGGGCGGCGTGGGCGGTGTACACGGTGCGGGCGCTGTAGACGGCGCCGGCTGGACGGACGGCG CGGGCGGTGAGCTCGCCGTC
Downstream 100 bases:
>100_bases CCCGCGTGGCCGCGATCGACTGTGGCACCAACTCCATCCGACTGCTCGTGGCCGAGCTCGACGAGGGGGCGGCCGGCTCC GGTGGGCGGCTGCGCGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MHRQLGRPPRAVLGVAHRCSCGLPDVVETAPRLEDGTPFPTLFYLTCPRAAAAISRLEGSGLMREMTARLGTDPGLAAAY RAAHRDYLARRDAHGTLPGDPSAGGMPDRVKCLHVLVAHSLAAGPGVNPFGDEALAQLADWGARGPCVEPDGASCAGEPG GSRGHAARVGQGREETAG
Sequences:
>Translated_178_residues MHRQLGRPPRAVLGVAHRCSCGLPDVVETAPRLEDGTPFPTLFYLTCPRAAAAISRLEGSGLMREMTARLGTDPGLAAAY RAAHRDYLARRDAHGTLPGDPSAGGMPDRVKCLHVLVAHSLAAGPGVNPFGDEALAQLADWGARGPCVEPDGASCAGEPG GSRGHAARVGQGREETAG >Mature_178_residues MHRQLGRPPRAVLGVAHRCSCGLPDVVETAPRLEDGTPFPTLFYLTCPRAAAAISRLEGSGLMREMTARLGTDPGLAAAY RAAHRDYLARRDAHGTLPGDPSAGGMPDRVKCLHVLVAHSLAAGPGVNPFGDEALAQLADWGARGPCVEPDGASCAGEPG GSRGHAARVGQGREETAG
Specific function: Unknown
COG id: COG1507
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18407; Mature: 18407
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRQLGRPPRAVLGVAHRCSCGLPDVVETAPRLEDGTPFPTLFYLTCPRAAAAISRLEGS CCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHCCC GLMREMTARLGTDPGLAAAYRAAHRDYLARRDAHGTLPGDPSAGGMPDRVKCLHVLVAHS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LAAGPGVNPFGDEALAQLADWGARGPCVEPDGASCAGEPGGSRGHAARVGQGREETAG HHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure MHRQLGRPPRAVLGVAHRCSCGLPDVVETAPRLEDGTPFPTLFYLTCPRAAAAISRLEGS CCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHCCC GLMREMTARLGTDPGLAAAYRAAHRDYLARRDAHGTLPGDPSAGGMPDRVKCLHVLVAHS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LAAGPGVNPFGDEALAQLADWGARGPCVEPDGASCAGEPGGSRGHAARVGQGREETAG HHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA