| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312642
Identifier: 158312642
GI number: 158312642
Start: 912113
End: 913150
Strand: Direct
Name: 158312642
Synonym: Franean1_0786
Alternate gene names: NA
Gene position: 912113-913150 (Clockwise)
Preceding gene: 158312641
Following gene: 158312644
Centisome position: 10.15
GC content: 72.25
Gene sequence:
>1038_bases GTGCCGGACATCGCACCCGACTCGGTTGCCGACCAGGCGACACCTGCCGGCTCCACCCTGGAGAGACCAGCTCCGGACAG CCCAGCTCCGGACGGCCCCGCCGCCGCGCCCGCCAGGGTGCCGTCCGTGCCCGCCGTGCGGCCGGCCGCGGACGGCTGGT CGTTCGAGCTCCAGCTCGTGAGCTTCCACAGCCGTGACCAGCTCGAGCAGATGTTCGCGACGCTGCCGATCGACATGCCC GTCGTCGTCGTCGACAACGCCAGTGGCGTCGACCGGGTGGACGAGCTCCTCGCCGACCGGCCGAACGGCCGCTACATCGA TTCCGGTGGCGGCAAGGGCTTCGCGAAGGCGTCCAACATGGGCATCCGCTCGTCCGCGTACGACTACGTGGTGCTGGGCA ACCCGGACAGCCGGCCGACCGTCGAGGTCATCAGGACGCTCGTCGCCGACCTTGAGGGCGACCCCGGCCTGGTCGTGAGC GCGGCGACCATGAAGGGGCAGGACGACAAGCCCGAGCTCGGCAACGGCGGCTGGGAGCCGACCCCCCGTCGGGTGCTCAT GCACGTCCTGGGAGCCCACAAGATCGCCCCGTCGTCGGCGCTGTTCGCCCGTCCGACGCCGAACCGGCCGATGAGCCCCG AGTGGCTGACCGGGGCCTGCATGGCCGTCCGCCGGCAGTCGTTCCTCGAGCTCGGCGGCTTCGACGAGACGTTCTACGTC TACAACGAGGACATGGCGCTGGGCCGGGCGATCCGCGAGGCGGGGATGCGCCAGCAGCTGCGCACCGACCTGCTCGTCCC GCACGGCGCCGGCGGCTCCGGGGCCGGCAAGACGTGGATGCTGCAGATGCGCGGCGCCTCGATGGTCCGCTACCTGCGCA AGCACAATGCCCCGGCGCGGGTGAACGTGATGCGCTCGATGCTCGTCGCCGGTTACGCGGGCCGCACGGTGCTCTCCCGG GTGCGGGGCCGCAGGGCCACGGCCGACGAGCACGCCGCCTACATCAAGGGCCTGCTGGTCGGTCCCCCGCCCCGCTGA
Upstream 100 bases:
>100_bases ATCGACCCCGCCAGCGCGTCCGGGGCCTCCGTGTCCGTTGTGTGACTGTCGTCCGTCGTGAGCTGACCGTTCCGAGCGGC GAGCTGAGAGGAACAGACCC
Downstream 100 bases:
>100_bases CACCAGGGCACTGTCGACACCGACACCGACGCCTGGACGTTCCGAGCGCCGGTGCGGTGTCCGGCACCCGCGCGGGTTCA GTGCGGTGTCCGCCACCCGC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Group 2 Family; Rhamnosyl Transferase; Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; DTDP-Rhamnosyl Transferase; Family 2 Glycosyl Transferase Protein; B-Glycosyltransferase; Glycosyl Transferase Protein; Glycosyltransferases-Like Protein; Glycosyltransferase/Rhamnosyltransferase; Glycosyltransferase-Like
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MPDIAPDSVADQATPAGSTLERPAPDSPAPDGPAAAPARVPSVPAVRPAADGWSFELQLVSFHSRDQLEQMFATLPIDMP VVVVDNASGVDRVDELLADRPNGRYIDSGGGKGFAKASNMGIRSSAYDYVVLGNPDSRPTVEVIRTLVADLEGDPGLVVS AATMKGQDDKPELGNGGWEPTPRRVLMHVLGAHKIAPSSALFARPTPNRPMSPEWLTGACMAVRRQSFLELGGFDETFYV YNEDMALGRAIREAGMRQQLRTDLLVPHGAGGSGAGKTWMLQMRGASMVRYLRKHNAPARVNVMRSMLVAGYAGRTVLSR VRGRRATADEHAAYIKGLLVGPPPR
Sequences:
>Translated_345_residues MPDIAPDSVADQATPAGSTLERPAPDSPAPDGPAAAPARVPSVPAVRPAADGWSFELQLVSFHSRDQLEQMFATLPIDMP VVVVDNASGVDRVDELLADRPNGRYIDSGGGKGFAKASNMGIRSSAYDYVVLGNPDSRPTVEVIRTLVADLEGDPGLVVS AATMKGQDDKPELGNGGWEPTPRRVLMHVLGAHKIAPSSALFARPTPNRPMSPEWLTGACMAVRRQSFLELGGFDETFYV YNEDMALGRAIREAGMRQQLRTDLLVPHGAGGSGAGKTWMLQMRGASMVRYLRKHNAPARVNVMRSMLVAGYAGRTVLSR VRGRRATADEHAAYIKGLLVGPPPR >Mature_344_residues PDIAPDSVADQATPAGSTLERPAPDSPAPDGPAAAPARVPSVPAVRPAADGWSFELQLVSFHSRDQLEQMFATLPIDMPV VVVDNASGVDRVDELLADRPNGRYIDSGGGKGFAKASNMGIRSSAYDYVVLGNPDSRPTVEVIRTLVADLEGDPGLVVSA ATMKGQDDKPELGNGGWEPTPRRVLMHVLGAHKIAPSSALFARPTPNRPMSPEWLTGACMAVRRQSFLELGGFDETFYVY NEDMALGRAIREAGMRQQLRTDLLVPHGAGGSGAGKTWMLQMRGASMVRYLRKHNAPARVNVMRSMLVAGYAGRTVLSRV RGRRATADEHAAYIKGLLVGPPPR
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36957; Mature: 36825
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDIAPDSVADQATPAGSTLERPAPDSPAPDGPAAAPARVPSVPAVRPAADGWSFELQLV CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE SFHSRDQLEQMFATLPIDMPVVVVDNASGVDRVDELLADRPNGRYIDSGGGKGFAKASNM ECCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCCCHHHCCC GIRSSAYDYVVLGNPDSRPTVEVIRTLVADLEGDPGLVVSAATMKGQDDKPELGNGGWEP CCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCC TPRRVLMHVLGAHKIAPSSALFARPTPNRPMSPEWLTGACMAVRRQSFLELGGFDETFYV CHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE YNEDMALGRAIREAGMRQQLRTDLLVPHGAGGSGAGKTWMLQMRGASMVRYLRKHNAPAR ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCHH VNVMRSMLVAGYAGRTVLSRVRGRRATADEHAAYIKGLLVGPPPR HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCC >Mature Secondary Structure PDIAPDSVADQATPAGSTLERPAPDSPAPDGPAAAPARVPSVPAVRPAADGWSFELQLV CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE SFHSRDQLEQMFATLPIDMPVVVVDNASGVDRVDELLADRPNGRYIDSGGGKGFAKASNM ECCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCCCHHHCCC GIRSSAYDYVVLGNPDSRPTVEVIRTLVADLEGDPGLVVSAATMKGQDDKPELGNGGWEP CCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCC TPRRVLMHVLGAHKIAPSSALFARPTPNRPMSPEWLTGACMAVRRQSFLELGGFDETFYV CHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE YNEDMALGRAIREAGMRQQLRTDLLVPHGAGGSGAGKTWMLQMRGASMVRYLRKHNAPAR ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCHH VNVMRSMLVAGYAGRTVLSRVRGRRATADEHAAYIKGLLVGPPPR HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA