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The map label for this gene is 158312627

Identifier: 158312627

GI number: 158312627

Start: 898556

End: 899575

Strand: Direct

Name: 158312627

Synonym: Franean1_0771

Alternate gene names: NA

Gene position: 898556-899575 (Clockwise)

Preceding gene: 158312623

Following gene: 158312630

Centisome position: 10.0

GC content: 69.51

Gene sequence:

>1020_bases
ATGACCGCTACCGACACGGTGAAAGCGACCGAAACCAGGCATCAAGGCGCGGCCGTGGTTGGAGGTGACCAGTCCGTCGC
GGATGCCGGCGGGGTCACGTCGCCGGCGCCGACCGAGTCCCACACCACCACTCCCTCGATGTTCCGGGCGCGTGGCGAAC
AGCTTGTGCTTGTGGCGACGATCCTATTTCCGTTCGCGGCGCTTGTCGCGGCAGTTCCGTTGTTGTGGGACCACTGGATC
ACATGGCGGGACGTCATCCTCGCGGCGGTGATGTACGCGATCACCGGCCACGGCGTCACCGTCGGATTCCATCGCTATTT
CACCCACCGGGGTTTCAAGACCTCCAAGCCGGTGCGTGCCGCGCTCGCCATCGCCGGCAACATGGCCATAGAGGGCCCGG
TGATCCGCTGGGTGGCCGACCACCGCCGTCACCACGCCTTCAGCGACGCCGACGGCGACCCGCACTCACCGTGGCGCTAC
GGCACCGGCCCGGCCGCCCTCGCCCGCGGGCTCTGGCACGCCCACGTCGGCTGGCTCTTCGACGTCGAGCAGACCGACCA
GCGCCGCTACGCCCCCGACCTCCTGGACGACCCGATGATCGTCCGGGTGAGCCGTTCGTTTGCTCTCTGTGCCTTCGTCA
GCCTCGCCCTGCCCGCGGTCATCGGCGGCCTGTGGGGCGGTTCGTTCGAGGCCGCGCTCCAGGCCTTCTTCTGGGCCTCG
CTCGTCCGGGTGGCGCTGCTCCACCATGTGACCTGGTCGGTCAACAGCATCTGCCACGTCATGGGCTCCCGGCCCTACCG
CTCCCGCGACCGCTCGGGCAACGTGTGGCCGCTGGCCCTGCTTTCCATGGGCGAGTCCTGGCACAACCTGCACCACGCCG
AGCCGACCTCGGCCCGGCACGGCGTCCGCCCCTGGCAGATCGACACCAGCTTCTACGTGATCAAGACTCTGGAGATCCTC
GGGCTGGCCCGGGACGTCCGCTGGCCCGACCCCGCCCGCCTGGCCGCCAAGCGCGCCTGA

Upstream 100 bases:

>100_bases
GGCGGACGCCGTGAATGGTGCCCGTTGTCATCCAGGCGGGCTAACGTGGCGACCAGAGGGTCGGCAGTGGGCGGCCCACC
GCGACGGACGGGATGAAGCA

Downstream 100 bases:

>100_bases
CCGGCGTCGTCCACTCCCAGCGCCGCTGGTCCCGGCTCTCGACCTCGGCATCTGTCTCGCCGCCCCGGCACCCGCCCCGA
GCCCCGGGGCGGGTGCCGGA

Product: stearoyl-CoA 9-desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Fatty Acid Desaturase Subfamily; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Family Proteiin; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Family Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Stearoyl/Acyl-CoA Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase; Fatty Acid Desaturase Family; Fatty Acid Desaturase Protein; Fatty-Acid Desaturase-Like Protein

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MTATDTVKATETRHQGAAVVGGDQSVADAGGVTSPAPTESHTTTPSMFRARGEQLVLVATILFPFAALVAAVPLLWDHWI
TWRDVILAAVMYAITGHGVTVGFHRYFTHRGFKTSKPVRAALAIAGNMAIEGPVIRWVADHRRHHAFSDADGDPHSPWRY
GTGPAALARGLWHAHVGWLFDVEQTDQRRYAPDLLDDPMIVRVSRSFALCAFVSLALPAVIGGLWGGSFEAALQAFFWAS
LVRVALLHHVTWSVNSICHVMGSRPYRSRDRSGNVWPLALLSMGESWHNLHHAEPTSARHGVRPWQIDTSFYVIKTLEIL
GLARDVRWPDPARLAAKRA

Sequences:

>Translated_339_residues
MTATDTVKATETRHQGAAVVGGDQSVADAGGVTSPAPTESHTTTPSMFRARGEQLVLVATILFPFAALVAAVPLLWDHWI
TWRDVILAAVMYAITGHGVTVGFHRYFTHRGFKTSKPVRAALAIAGNMAIEGPVIRWVADHRRHHAFSDADGDPHSPWRY
GTGPAALARGLWHAHVGWLFDVEQTDQRRYAPDLLDDPMIVRVSRSFALCAFVSLALPAVIGGLWGGSFEAALQAFFWAS
LVRVALLHHVTWSVNSICHVMGSRPYRSRDRSGNVWPLALLSMGESWHNLHHAEPTSARHGVRPWQIDTSFYVIKTLEIL
GLARDVRWPDPARLAAKRA
>Mature_338_residues
TATDTVKATETRHQGAAVVGGDQSVADAGGVTSPAPTESHTTTPSMFRARGEQLVLVATILFPFAALVAAVPLLWDHWIT
WRDVILAAVMYAITGHGVTVGFHRYFTHRGFKTSKPVRAALAIAGNMAIEGPVIRWVADHRRHHAFSDADGDPHSPWRYG
TGPAALARGLWHAHVGWLFDVEQTDQRRYAPDLLDDPMIVRVSRSFALCAFVSLALPAVIGGLWGGSFEAALQAFFWASL
VRVALLHHVTWSVNSICHVMGSRPYRSRDRSGNVWPLALLSMGESWHNLHHAEPTSARHGVRPWQIDTSFYVIKTLEILG
LARDVRWPDPARLAAKRA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148596961, Length=266, Percent_Identity=30.4511278195489, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI53759151, Length=253, Percent_Identity=30.0395256916996, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI148596938, Length=124, Percent_Identity=35.4838709677419, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17540878, Length=254, Percent_Identity=32.2834645669291, Blast_Score=134, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI17561776, Length=251, Percent_Identity=29.4820717131474, Blast_Score=127, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI17561774, Length=227, Percent_Identity=33.4801762114537, Blast_Score=119, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6321383, Length=266, Percent_Identity=28.1954887218045, Blast_Score=129, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24646303, Length=256, Percent_Identity=32.421875, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24646299, Length=256, Percent_Identity=32.421875, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24646305, Length=256, Percent_Identity=32.421875, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24646301, Length=256, Percent_Identity=32.421875, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24646297, Length=256, Percent_Identity=32.421875, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24646500, Length=256, Percent_Identity=30.078125, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI21358571, Length=245, Percent_Identity=32.6530612244898, Blast_Score=121, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24646295, Length=295, Percent_Identity=31.864406779661, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24662393, Length=332, Percent_Identity=27.1084337349398, Blast_Score=111, Evalue=6e-25,
Organism=Drosophila melanogaster, GI21358573, Length=241, Percent_Identity=31.9502074688797, Blast_Score=106, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37317; Mature: 37186

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATDTVKATETRHQGAAVVGGDQSVADAGGVTSPAPTESHTTTPSMFRARGEQLVLVAT
CCCCCCCHHHHHHCCCCEEECCCCCHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEHHHH
ILFPFAALVAAVPLLWDHWITWRDVILAAVMYAITGHGVTVGFHRYFTHRGFKTSKPVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCHHHH
ALAIAGNMAIEGPVIRWVADHRRHHAFSDADGDPHSPWRYGTGPAALARGLWHAHVGWLF
HHHHHCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEE
DVEQTDQRRYAPDLLDDPMIVRVSRSFALCAFVSLALPAVIGGLWGGSFEAALQAFFWAS
ECCCCHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LVRVALLHHVTWSVNSICHVMGSRPYRSRDRSGNVWPLALLSMGESWHNLHHAEPTSARH
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCHHHHHCCCCCCCCHHC
GVRPWQIDTSFYVIKTLEILGLARDVRWPDPARLAAKRA
CCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCC
>Mature Secondary Structure 
TATDTVKATETRHQGAAVVGGDQSVADAGGVTSPAPTESHTTTPSMFRARGEQLVLVAT
CCCCCCHHHHHHCCCCEEECCCCCHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEHHHH
ILFPFAALVAAVPLLWDHWITWRDVILAAVMYAITGHGVTVGFHRYFTHRGFKTSKPVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCHHHH
ALAIAGNMAIEGPVIRWVADHRRHHAFSDADGDPHSPWRYGTGPAALARGLWHAHVGWLF
HHHHHCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEE
DVEQTDQRRYAPDLLDDPMIVRVSRSFALCAFVSLALPAVIGGLWGGSFEAALQAFFWAS
ECCCCHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LVRVALLHHVTWSVNSICHVMGSRPYRSRDRSGNVWPLALLSMGESWHNLHHAEPTSARH
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCHHHHHCCCCCCCCHHC
GVRPWQIDTSFYVIKTLEILGLARDVRWPDPARLAAKRA
CCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA