Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158312476

Identifier: 158312476

GI number: 158312476

Start: 720249

End: 721457

Strand: Direct

Name: 158312476

Synonym: Franean1_0619

Alternate gene names: NA

Gene position: 720249-721457 (Clockwise)

Preceding gene: 158312475

Following gene: 158312477

Centisome position: 8.02

GC content: 67.16

Gene sequence:

>1209_bases
ATGACGTCATCACAGTCGCTGGACTGGCTGATCTCGGTCGACGACCACGTCCTGGAGCCGCCGAACCTGTGGACCGACCG
GCTCCCGGCCAAGGACCACGACCGGGCTCCCCACATGGTGATCGACGACACGGGAATGGACTGCTGGGTCTACGACGGCA
AGCGTTTCCCGAGCTCCGGGCTGAGCGCCGTCGCCGGGAAGGAGAAGGAGGAGTTCAGCCCCGAGCCCCTCTCCTATGCC
GACATGCGGCCCGGTTGCTACGACCCGCAGGCCCGCCTGGAGGACATGAACCGGGCCGGCATCCTGGCCTCGCTGTGCTT
CCCGACGGTGACCCGGTTCTGCGGGCAGATGTTCTCCGAGGCGAGCGACCGCGAGTTCGGCCTGGTGTGCCTGAAGATCT
ACAACGACTGGATGATCGAGGAGTGGTGCGGCAGCGCTCCCGGCCGCTACATCCCGCTCACCCTCATCCCGCTGTGGGAC
CCGCAGCTCGCGGTGAAGGAGCTCGAGCGCTGCGCGGCGAAGGGGTCCACCACCTTCGCCTTCTCGGAGAACCCGGCCCC
GCTGGGCCTGCCGACCATCCACGACCGCGACGGGTACTGGGAGCCGGTGATGGCTGCCGCGAACGACCTGGAGATGGTCG
CGTCGATGCACGTCGGCTCCTCGTCGCAGGTGCCGAAGATCGCTCCCGACGCGCCGTTCATGGCGAACCTGACCTGGGGC
GCGATGCGTACCTCGGGCGCCATGCTCTCCTGGCTGTTCAGCGGGATGTTCCAGCGGTACCCGAAGCTGAAGATCGCGCT
CTCGGAGGGCGAGATCGGCTGGATGCCGTACTACCTGGAGCGCGCCGAGCAGGTGATCGACAAGCAGCGCCACTGGGTCA
AGCGTGGTGTCCGCTTCAACGAGCACGCCGGGGCGGACGCCCTCGACCTGGACACCCTCGACATCCGCGCCAGCTTCCGT
GAGCACGTCTTCGGTTGCTTCATCGACGACGCGCACGGCATCGCCAGCATCGACGAGATCGGCGAGGACAACATCATGTG
CGAGACGGACTACCCGCACTCCGACTCGACCTGGCCGAACTGCATCGACGTCGTCAGGAACCGGATCGGCCACCTGTCGG
AGGAGGTCCAGTACAAGATCCTGCGCGGCAACGCCGAGCGGCTGTACCGGTTCACCCCGGCCGAGCCGCCTGTGCTCGCG
AAGGCCTGA

Upstream 100 bases:

>100_bases
GCGAGCGCGGGCCGGACGGCATCCGCGCCTTCCAGGAAGTCAAGCACCTCGCCATCGGCGAGCTCCGCTGAGCCCGTCCC
CGGACCGGAGGGAAACACTG

Downstream 100 bases:

>100_bases
CATGGCAGGGCGGGCACCGCTCGCGGTCGTCGACCGCGAGCGGTGCATCGGCAGCGGCATGTGTGTGGACTACGCGCCGG
GCACCTTCACCCAGGACGAG

Product: amidohydrolase 2

Products: NA

Alternate protein names: Amidase; Amidohydrolase Family Protein; Amidohydrolase Family; Barh Protein; TIM-Barrel Fold Metal-Dependent Hydrolase; Metal-Dependent Amidohydrolase; Amidohydrolase 2 Protein; Hydrolase; Aminocarboxymuconate-Semialdehyde Decarboxylase; Minocarboxymuconate-Semialdehyde Decarboxylase.

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTSSQSLDWLISVDDHVLEPPNLWTDRLPAKDHDRAPHMVIDDTGMDCWVYDGKRFPSSGLSAVAGKEKEEFSPEPLSYA
DMRPGCYDPQARLEDMNRAGILASLCFPTVTRFCGQMFSEASDREFGLVCLKIYNDWMIEEWCGSAPGRYIPLTLIPLWD
PQLAVKELERCAAKGSTTFAFSENPAPLGLPTIHDRDGYWEPVMAAANDLEMVASMHVGSSSQVPKIAPDAPFMANLTWG
AMRTSGAMLSWLFSGMFQRYPKLKIALSEGEIGWMPYYLERAEQVIDKQRHWVKRGVRFNEHAGADALDLDTLDIRASFR
EHVFGCFIDDAHGIASIDEIGEDNIMCETDYPHSDSTWPNCIDVVRNRIGHLSEEVQYKILRGNAERLYRFTPAEPPVLA
KA

Sequences:

>Translated_402_residues
MTSSQSLDWLISVDDHVLEPPNLWTDRLPAKDHDRAPHMVIDDTGMDCWVYDGKRFPSSGLSAVAGKEKEEFSPEPLSYA
DMRPGCYDPQARLEDMNRAGILASLCFPTVTRFCGQMFSEASDREFGLVCLKIYNDWMIEEWCGSAPGRYIPLTLIPLWD
PQLAVKELERCAAKGSTTFAFSENPAPLGLPTIHDRDGYWEPVMAAANDLEMVASMHVGSSSQVPKIAPDAPFMANLTWG
AMRTSGAMLSWLFSGMFQRYPKLKIALSEGEIGWMPYYLERAEQVIDKQRHWVKRGVRFNEHAGADALDLDTLDIRASFR
EHVFGCFIDDAHGIASIDEIGEDNIMCETDYPHSDSTWPNCIDVVRNRIGHLSEEVQYKILRGNAERLYRFTPAEPPVLA
KA
>Mature_401_residues
TSSQSLDWLISVDDHVLEPPNLWTDRLPAKDHDRAPHMVIDDTGMDCWVYDGKRFPSSGLSAVAGKEKEEFSPEPLSYAD
MRPGCYDPQARLEDMNRAGILASLCFPTVTRFCGQMFSEASDREFGLVCLKIYNDWMIEEWCGSAPGRYIPLTLIPLWDP
QLAVKELERCAAKGSTTFAFSENPAPLGLPTIHDRDGYWEPVMAAANDLEMVASMHVGSSSQVPKIAPDAPFMANLTWGA
MRTSGAMLSWLFSGMFQRYPKLKIALSEGEIGWMPYYLERAEQVIDKQRHWVKRGVRFNEHAGADALDLDTLDIRASFRE
HVFGCFIDDAHGIASIDEIGEDNIMCETDYPHSDSTWPNCIDVVRNRIGHLSEEVQYKILRGNAERLYRFTPAEPPVLAK
A

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71995651, Length=189, Percent_Identity=28.042328042328, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45264; Mature: 45132

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSQSLDWLISVDDHVLEPPNLWTDRLPAKDHDRAPHMVIDDTGMDCWVYDGKRFPSSG
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC
LSAVAGKEKEEFSPEPLSYADMRPGCYDPQARLEDMNRAGILASLCFPTVTRFCGQMFSE
CHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
ASDREFGLVCLKIYNDWMIEEWCGSAPGRYIPLTLIPLWDPQLAVKELERCAAKGSTTFA
CCCCCCCEEEEEECCCHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEE
FSENPAPLGLPTIHDRDGYWEPVMAAANDLEMVASMHVGSSSQVPKIAPDAPFMANLTWG
ECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHH
AMRTSGAMLSWLFSGMFQRYPKLKIALSEGEIGWMPYYLERAEQVIDKQRHWVKRGVRFN
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
EHAGADALDLDTLDIRASFREHVFGCFIDDAHGIASIDEIGEDNIMCETDYPHSDSTWPN
CCCCCCEECCCHHHHHHHHHHHHEEEEEECCCCCCCHHHCCCCCEEECCCCCCCCCCCHH
CIDVVRNRIGHLSEEVQYKILRGNAERLYRFTPAEPPVLAKA
HHHHHHHHHHCHHHHHEEEEEECCHHHEEEECCCCCCCCCCC
>Mature Secondary Structure 
TSSQSLDWLISVDDHVLEPPNLWTDRLPAKDHDRAPHMVIDDTGMDCWVYDGKRFPSSG
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC
LSAVAGKEKEEFSPEPLSYADMRPGCYDPQARLEDMNRAGILASLCFPTVTRFCGQMFSE
CHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
ASDREFGLVCLKIYNDWMIEEWCGSAPGRYIPLTLIPLWDPQLAVKELERCAAKGSTTFA
CCCCCCCEEEEEECCCHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEE
FSENPAPLGLPTIHDRDGYWEPVMAAANDLEMVASMHVGSSSQVPKIAPDAPFMANLTWG
ECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHH
AMRTSGAMLSWLFSGMFQRYPKLKIALSEGEIGWMPYYLERAEQVIDKQRHWVKRGVRFN
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
EHAGADALDLDTLDIRASFREHVFGCFIDDAHGIASIDEIGEDNIMCETDYPHSDSTWPN
CCCCCCEECCCHHHHHHHHHHHHEEEEEECCCCCCCHHHCCCCCEEECCCCCCCCCCCHH
CIDVVRNRIGHLSEEVQYKILRGNAERLYRFTPAEPPVLAKA
HHHHHHHHHHCHHHHHEEEEEECCHHHEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA