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The map label for this gene is frc [H]

Identifier: 158312437

GI number: 158312437

Start: 672256

End: 673473

Strand: Direct

Name: frc [H]

Synonym: Franean1_0580

Alternate gene names: 158312437

Gene position: 672256-673473 (Clockwise)

Preceding gene: 158312436

Following gene: 158312438

Centisome position: 7.48

GC content: 70.53

Gene sequence:

>1218_bases
ATGACCGCGGTGATGCAGGGTGTACGGATTCTCGAGGTCGCTGAGCACACGTTCGTACCCGCTGCGTCCGCGTTGCTGTC
GGACTGGGGCGCCGACGTCATCAAGATCGAGCACGTCGAGCGTGGGGACGCGATGCGCGCGCTGGCGTCCTCGGGTGTCG
CGGTCGTCCCGAAGGACGTCCACGTGCTGTTGGAGCACTCCAACCGTGGCAAGCGCAGCCTCGGCCTCGACCTGACCTCC
CAGGCCGGCCGCGACATCCTCTACAAGCTCGCCGGCACCTGCGATGTGTTCCTGACGAACAAGCTGCCCAGCGTGCGTAC
CAAGCTGCATGTTGATGTCGAGGACATCCGCGCCCACAACCCGAACATCATCTACGTCCGCGGGACCGGGCAGGGCGAAC
GCGGGCCGGACGCGGACCGTGGCTCCTACGACTCGCTGGCCTTCTGGGCCCGCGCCGGCGTCGCGGTCGGCAGCATGCGC
CCGGAGTACAGCCATGTCCCGGTCCCGCCCGCGCCCGGTTTCGGTGACTCGATCGGCGCGATGACGATCGCCGGCGGGAT
CATGGGCGCGTTGTTCCACCGCGAGCGCACCGGTGAGGCCACCGAGGTCGACGTCTCCCTGATGGCCACCGGGATGTGGG
CGATGGGTCAGGCCCTCGCCCTGTCGCTGCTGCTCGACATCCCGTGGACCCCGCCGCCGCTGGACGCGCCGCGTTCCAAC
CCGCTGACCGGGAACTACCAGACCAAGGACGGCCGCTGGCTGTCGTTCACCTGCCTGCAGGCCGGGAAGTACTGGGCGCC
GATGTGCGAGGCCATCGGGCGTCCCGAGCTCGGCGCCGACCCGCGTTTCGTCGACCACGCCGCGCTGATGGCGAACAGCC
GGGAGGCCATCGCGATCCTCGAGGCCGCCTTCGCCGAGCACCCGCTGGCCGAGTGGCGTGAGCGGTTGGCGACCTTCATC
GGCCAGTGGACGGTCGTGCAGGACACCCTGGAGGCCGCCGCGGACCCGCAGGCCGTCGCCAACGGGTACGTCCAGGACTG
CGCCACCGCCGCCGGCATCCCGTTCCGGATGGCCGCCGCCCCGGTGCAGTACGGCGGGAAGCCCGCGCCGGCGGGCCGGG
CGCCGCTGTTCAACGAGCACGGCGACGAGATCCTCACCGAGCTCGGACTCGACACCGACGCCGTCCTCGACCTCAAGATC
CGCGGCGTCGTCGCATGA

Upstream 100 bases:

>100_bases
AGCGCGCAGGGAATCCACCCAGGCGAAAAGGTGATCCGCCGATCCCCGCGTACACGATGTGGCCGGTGACCGTCACCGGC
GATGAGGCAGGAGAGTGTTC

Downstream 100 bases:

>100_bases
CCCCCACCTCAACGAAGAGCCAGGAGACATTGAGATGACGCTGTTCGACGCGTTCCGATTCGACGGGAAGCGGGTCCTCG
TGGTCGGCGGCGCGACCGGC

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MTAVMQGVRILEVAEHTFVPAASALLSDWGADVIKIEHVERGDAMRALASSGVAVVPKDVHVLLEHSNRGKRSLGLDLTS
QAGRDILYKLAGTCDVFLTNKLPSVRTKLHVDVEDIRAHNPNIIYVRGTGQGERGPDADRGSYDSLAFWARAGVAVGSMR
PEYSHVPVPPAPGFGDSIGAMTIAGGIMGALFHRERTGEATEVDVSLMATGMWAMGQALALSLLLDIPWTPPPLDAPRSN
PLTGNYQTKDGRWLSFTCLQAGKYWAPMCEAIGRPELGADPRFVDHAALMANSREAIAILEAAFAEHPLAEWRERLATFI
GQWTVVQDTLEAAADPQAVANGYVQDCATAAGIPFRMAAAPVQYGGKPAPAGRAPLFNEHGDEILTELGLDTDAVLDLKI
RGVVA

Sequences:

>Translated_405_residues
MTAVMQGVRILEVAEHTFVPAASALLSDWGADVIKIEHVERGDAMRALASSGVAVVPKDVHVLLEHSNRGKRSLGLDLTS
QAGRDILYKLAGTCDVFLTNKLPSVRTKLHVDVEDIRAHNPNIIYVRGTGQGERGPDADRGSYDSLAFWARAGVAVGSMR
PEYSHVPVPPAPGFGDSIGAMTIAGGIMGALFHRERTGEATEVDVSLMATGMWAMGQALALSLLLDIPWTPPPLDAPRSN
PLTGNYQTKDGRWLSFTCLQAGKYWAPMCEAIGRPELGADPRFVDHAALMANSREAIAILEAAFAEHPLAEWRERLATFI
GQWTVVQDTLEAAADPQAVANGYVQDCATAAGIPFRMAAAPVQYGGKPAPAGRAPLFNEHGDEILTELGLDTDAVLDLKI
RGVVA
>Mature_404_residues
TAVMQGVRILEVAEHTFVPAASALLSDWGADVIKIEHVERGDAMRALASSGVAVVPKDVHVLLEHSNRGKRSLGLDLTSQ
AGRDILYKLAGTCDVFLTNKLPSVRTKLHVDVEDIRAHNPNIIYVRGTGQGERGPDADRGSYDSLAFWARAGVAVGSMRP
EYSHVPVPPAPGFGDSIGAMTIAGGIMGALFHRERTGEATEVDVSLMATGMWAMGQALALSLLLDIPWTPPPLDAPRSNP
LTGNYQTKDGRWLSFTCLQAGKYWAPMCEAIGRPELGADPRFVDHAALMANSREAIAILEAAFAEHPLAEWRERLATFIG
QWTVVQDTLEAAADPQAVANGYVQDCATAAGIPFRMAAAPVQYGGKPAPAGRAPLFNEHGDEILTELGLDTDAVLDLKIR
GVVA

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=413, Percent_Identity=27.3607748184019, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI300863124, Length=439, Percent_Identity=26.6514806378132, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI42794625, Length=413, Percent_Identity=24.9394673123487, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI266456254, Length=413, Percent_Identity=24.9394673123487, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI300863126, Length=143, Percent_Identity=34.2657342657343, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI266458393, Length=272, Percent_Identity=27.2058823529412, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI266458397, Length=272, Percent_Identity=27.2058823529412, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI87082093, Length=387, Percent_Identity=24.031007751938, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1788717, Length=420, Percent_Identity=24.2857142857143, Blast_Score=91, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24648431, Length=425, Percent_Identity=25.4117647058824, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24585488, Length=275, Percent_Identity=29.4545454545455, Blast_Score=87, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 43300; Mature: 43169

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVMQGVRILEVAEHTFVPAASALLSDWGADVIKIEHVERGDAMRALASSGVAVVPKDV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCEEECCCE
HVLLEHSNRGKRSLGLDLTSQAGRDILYKLAGTCDVFLTNKLPSVRTKLHVDVEDIRAHN
EEEEECCCCCCCCCCCCCHHHCCHHHHHHHHCCEEEEEECCCCCCCEEEEEEHHHHHCCC
PNIIYVRGTGQGERGPDADRGSYDSLAFWARAGVAVGSMRPEYSHVPVPPAPGFGDSIGA
CCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCHHH
MTIAGGIMGALFHRERTGEATEVDVSLMATGMWAMGQALALSLLLDIPWTPPPLDAPRSN
HHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PLTGNYQTKDGRWLSFTCLQAGKYWAPMCEAIGRPELGADPRFVDHAALMANSREAIAIL
CCCCCEECCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHH
EAAFAEHPLAEWRERLATFIGQWTVVQDTLEAAADPQAVANGYVQDCATAAGIPFRMAAA
HHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCC
PVQYGGKPAPAGRAPLFNEHGDEILTELGLDTDAVLDLKIRGVVA
CHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECC
>Mature Secondary Structure 
TAVMQGVRILEVAEHTFVPAASALLSDWGADVIKIEHVERGDAMRALASSGVAVVPKDV
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCEEECCCE
HVLLEHSNRGKRSLGLDLTSQAGRDILYKLAGTCDVFLTNKLPSVRTKLHVDVEDIRAHN
EEEEECCCCCCCCCCCCCHHHCCHHHHHHHHCCEEEEEECCCCCCCEEEEEEHHHHHCCC
PNIIYVRGTGQGERGPDADRGSYDSLAFWARAGVAVGSMRPEYSHVPVPPAPGFGDSIGA
CCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCHHH
MTIAGGIMGALFHRERTGEATEVDVSLMATGMWAMGQALALSLLLDIPWTPPPLDAPRSN
HHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PLTGNYQTKDGRWLSFTCLQAGKYWAPMCEAIGRPELGADPRFVDHAALMANSREAIAIL
CCCCCEECCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHH
EAAFAEHPLAEWRERLATFIGQWTVVQDTLEAAADPQAVANGYVQDCATAAGIPFRMAAA
HHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCC
PVQYGGKPAPAGRAPLFNEHGDEILTELGLDTDAVLDLKIRGVVA
CHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]