| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is uhpB [C]
Identifier: 158312390
GI number: 158312390
Start: 619891
End: 621204
Strand: Direct
Name: uhpB [C]
Synonym: Franean1_0532
Alternate gene names: 158312390
Gene position: 619891-621204 (Clockwise)
Preceding gene: 158312386
Following gene: 158312391
Centisome position: 6.9
GC content: 75.72
Gene sequence:
>1314_bases ATGGCGTCACGGCCGCGAAGCCGGTCACGATGGGCTGTGTCCTCGGCCATGGTCGCTTCCGACGTCCTGTCCGTCCCGCC CGGCCCGCTGCCCCGGGAGGGCGCCGCCTCGCCCGGAGCCCGTCCGGGCCATCCGCTGTGGCGCGCGCGCCCGTACCGGG CCGACGTCTGGCTGGCGATCGGCCTGGCGGTCGCGACGATCACGGTGACACTGGTCTCGTCCGGTCGGGCGCCCTACCAC CCGCCGGACGCGGTCACGGCGGCGCTGGCCGCGGTGTCCGCGCTGGCGCTGGCCTGGCGGCAGGCCGCGCCGCTCGCCGC GATGGCGGTGACGTCGACGATCGTCGCGGTCAACGCCGCGGCCGGCTACGCCGTCGTGGCCGTCCAGTGGCCAGCGTGGC TGGCTCTGTTCGGCTGCTTCTCGGTGGGCGGCCGTGGTGTCCGGATCGCCAGCACCGCGCTGTGCGTCATGGCCGTCGGC GGCTACGCCCTCTTCGACCGCGGTGCCCTGACGGTCGAGGACATGGCCGGGATCACGATGTCCTTCCTCATCGCGACGGT CGGCGGCGACGCCGCGCGCAGCCGCCGCGCGGTCGCCGCGGCGCAGCACGCCCAGGTTCGCGGCGAGGCACGGGAGCAGG CGCTGGCCGCCGAGCGCCTGCTGCACGAGGAAAGAGGCCGGCTGGCGGGCGAGCTGCACGACGCGCTGGGCCACACCGTG AACGTGATGGTGTTGCAGGCGGGCGTCGCGCGGCGGCTGTTCGCGGAGAACCCGGCCTTCGCCCAGCAGGCGCTCGCCGA CATCGAGAACGTGGGCCGGGAAGCGCTGGGCGAGCTGGACCGGATGCTGCGGGTGCTGCATCCGGTCCAGGACCCGCGCC AGGGCGACGGGGGCCTCGACGTGAGTGACGACGACCCGGACGACGCCCACGGCCAGGCGGGCGCCCAAGGACTGGCGGCG CTCGCCGACCGGATCCGCGCCACCGGGCGGGAGGTGGACCTCGACGCCGAACCCGTCGACCTGTCGGCGGGCAGCGAGCG GGTGCTGTACCGGATCGTGCGGGAGGCGCTGACCAACGCCGTCCGGCACACCGACACGGGACGGATCCGCGTTCGGGTCA GCCGGGTCGCCGACCAGATCCGGGTCGAGGTGTTCAACGAGGGCGCCGGGTTCGCCTCCCCGGTGCCGGGCCGGGGGCTG ATCGGCATGCGGGAGCGGGCCCGGCTCGAGGGCGGGTCGTTCGAGGCCGGACCCGTCGAGGGCGGCTTCCGGGTGCTGGC CACCCTCCCGACGCACCCGGCCACCGGCTCGTGA
Upstream 100 bases:
>100_bases GCGGGGGACCGGGGGTCGACACCCTGGCGGGTCGTATCGGCCCGCGTCTGGTCACCCTCGGCGTCACCCGCGCGGGTGAC GCTGGCTGCCCGGCCTGGGG
Downstream 100 bases:
>100_bases TCACCGTGCTGCTGGCCGACGACGACGGCCTGGTGCGCAGCGGGCTGCGGGCGTTGCTGGACGCCGAGCCGGACATCTGT GTCGCCGCCGAGGCGGCCAC
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MASRPRSRSRWAVSSAMVASDVLSVPPGPLPREGAASPGARPGHPLWRARPYRADVWLAIGLAVATITVTLVSSGRAPYH PPDAVTAALAAVSALALAWRQAAPLAAMAVTSTIVAVNAAAGYAVVAVQWPAWLALFGCFSVGGRGVRIASTALCVMAVG GYALFDRGALTVEDMAGITMSFLIATVGGDAARSRRAVAAAQHAQVRGEAREQALAAERLLHEERGRLAGELHDALGHTV NVMVLQAGVARRLFAENPAFAQQALADIENVGREALGELDRMLRVLHPVQDPRQGDGGLDVSDDDPDDAHGQAGAQGLAA LADRIRATGREVDLDAEPVDLSAGSERVLYRIVREALTNAVRHTDTGRIRVRVSRVADQIRVEVFNEGAGFASPVPGRGL IGMRERARLEGGSFEAGPVEGGFRVLATLPTHPATGS
Sequences:
>Translated_437_residues MASRPRSRSRWAVSSAMVASDVLSVPPGPLPREGAASPGARPGHPLWRARPYRADVWLAIGLAVATITVTLVSSGRAPYH PPDAVTAALAAVSALALAWRQAAPLAAMAVTSTIVAVNAAAGYAVVAVQWPAWLALFGCFSVGGRGVRIASTALCVMAVG GYALFDRGALTVEDMAGITMSFLIATVGGDAARSRRAVAAAQHAQVRGEAREQALAAERLLHEERGRLAGELHDALGHTV NVMVLQAGVARRLFAENPAFAQQALADIENVGREALGELDRMLRVLHPVQDPRQGDGGLDVSDDDPDDAHGQAGAQGLAA LADRIRATGREVDLDAEPVDLSAGSERVLYRIVREALTNAVRHTDTGRIRVRVSRVADQIRVEVFNEGAGFASPVPGRGL IGMRERARLEGGSFEAGPVEGGFRVLATLPTHPATGS >Mature_436_residues ASRPRSRSRWAVSSAMVASDVLSVPPGPLPREGAASPGARPGHPLWRARPYRADVWLAIGLAVATITVTLVSSGRAPYHP PDAVTAALAAVSALALAWRQAAPLAAMAVTSTIVAVNAAAGYAVVAVQWPAWLALFGCFSVGGRGVRIASTALCVMAVGG YALFDRGALTVEDMAGITMSFLIATVGGDAARSRRAVAAAQHAQVRGEAREQALAAERLLHEERGRLAGELHDALGHTVN VMVLQAGVARRLFAENPAFAQQALADIENVGREALGELDRMLRVLHPVQDPRQGDGGLDVSDDDPDDAHGQAGAQGLAAL ADRIRATGREVDLDAEPVDLSAGSERVLYRIVREALTNAVRHTDTGRIRVRVSRVADQIRVEVFNEGAGFASPVPGRGLI GMRERARLEGGSFEAGPVEGGFRVLATLPTHPATGS
Specific function: Member Of The Two-Component Regulatory System Uhpb/Uhpa Involved In The Regulation Of The Uptake Of Hexose Phosphates. Uhpb Functions As A Membrane-Associated Protein Kinase That Phosphorylates Uhpa In Response To Environmental Signals. [C]
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87082311, Length=230, Percent_Identity=30, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003018 - InterPro: IPR011712 - InterPro: IPR005467 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: 2.7.3.- [C]
Molecular weight: Translated: 45744; Mature: 45612
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRPRSRSRWAVSSAMVASDVLSVPPGPLPREGAASPGARPGHPLWRARPYRADVWLAI CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH GLAVATITVTLVSSGRAPYHPPDAVTAALAAVSALALAWRQAAPLAAMAVTSTIVAVNAA HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECC AGYAVVAVQWPAWLALFGCFSVGGRGVRIASTALCVMAVGGYALFDRGALTVEDMAGITM CCEEEEEEEHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHH SFLIATVGGDAARSRRAVAAAQHAQVRGEAREQALAAERLLHEERGRLAGELHDALGHTV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH NVMVLQAGVARRLFAENPAFAQQALADIENVGREALGELDRMLRVLHPVQDPRQGDGGLD HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC VSDDDPDDAHGQAGAQGLAALADRIRATGREVDLDAEPVDLSAGSERVLYRIVREALTNA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH VRHTDTGRIRVRVSRVADQIRVEVFNEGAGFASPVPGRGLIGMRERARLEGGSFEAGPVE HHCCCCCEEEEEHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC GGFRVLATLPTHPATGS CCEEEEEECCCCCCCCC >Mature Secondary Structure ASRPRSRSRWAVSSAMVASDVLSVPPGPLPREGAASPGARPGHPLWRARPYRADVWLAI CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH GLAVATITVTLVSSGRAPYHPPDAVTAALAAVSALALAWRQAAPLAAMAVTSTIVAVNAA HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECC AGYAVVAVQWPAWLALFGCFSVGGRGVRIASTALCVMAVGGYALFDRGALTVEDMAGITM CCEEEEEEEHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHH SFLIATVGGDAARSRRAVAAAQHAQVRGEAREQALAAERLLHEERGRLAGELHDALGHTV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH NVMVLQAGVARRLFAENPAFAQQALADIENVGREALGELDRMLRVLHPVQDPRQGDGGLD HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC VSDDDPDDAHGQAGAQGLAALADRIRATGREVDLDAEPVDLSAGSERVLYRIVREALTNA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH VRHTDTGRIRVRVSRVADQIRVEVFNEGAGFASPVPGRGLIGMRERARLEGGSFEAGPVE HHCCCCCEEEEEHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC GGFRVLATLPTHPATGS CCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8661927 [H]