Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is mdmB [H]

Identifier: 158312366

GI number: 158312366

Start: 588524

End: 589462

Strand: Direct

Name: mdmB [H]

Synonym: Franean1_0507

Alternate gene names: 158312366

Gene position: 588524-589462 (Clockwise)

Preceding gene: 158312362

Following gene: 158312369

Centisome position: 6.55

GC content: 64.86

Gene sequence:

>939_bases
ATGACAACGACAGAAGAAGTCAAGTCCAGCGAATCCATGAGATCCTCCACCAGGCAGCTCGACTCCCTCACCGGGCTGCG
CTGGGTCGCGGCCCTGATGGTGCTCGTCACGCACGCCGCGTTCCAGCCCGGGCTGCTTCCGTACAGCGGGACCACCGAGG
ACATCAAGGCCGTCGTGAAGATGGGCGGCTACATCGGCGTCGGATTCTTCTTCGTGCTGAGCGGGTTTGTGCTCACATGG
TCCATGCGCCCCGATGACACGCCGCGGAAGTTCTGGCGCAGACGCTTCTTCAAGATCTACCCGAACCACTTCGTGACGTT
CGTGCTGGCCGTCGTGATGATGGTGATACATGACCGCGAACTCGTCGGCATCGTGCCGAACCTGCTGCTGGTGCAGGCCT
GGTCGACCGACCTGGACGTCGCGTTCGGCATCAACGACGTGAGCTGGTCGCTGTCGGCCGAGATGCTGTTCTACCGGACG
GCAGGGCCACGCTGCTCCAGTGCTCCGCCCGCCCGCCCGCCCGCCCGACCGACCAACCGACCAACCGACACCGATGGTGC
CGAGATGCTCGCTGACTCATCGCACGCGGCGCGGATGAGCAGAAGTGATCTCGGTGAGTCAATGCACCGGCGTGCGATGC
GAGACCGTGCTCCGTCCGAGGGCCGAGTATGCCCGGAGTCGACCGGCTGGAAAGGAGAGACCGAAGGCGTTCCCGGGCTC
GGACACGAGCGAGACCGGGCCCTGCGGCGCCCATGCGCCCTCGTTCGCACCGGCGGGGCGAGGACGGGTGGTCTGGGCGC
GTGTTGGGTGCCAGAAGTTGGCTTGGGTTCAGTCCGTGTATCGGACGGGTTTGGGTTGGGTTCTATTGGCCTGGCTGTAT
GGGGTGCAGGTCGAAGATCGTGTGGCGGATGTCGTCGATGGTGTGGTCGAGGGCGTTGA

Upstream 100 bases:

>100_bases
GGCGGACACCTGCCAGGACCGAGCACGACACACCACAGCCCGACCCGGCGCGGTTGGCCGGCCAGCTCAGATACCTCCAG
GCGCCCTTTCGGGAAGGTCT

Downstream 100 bases:

>100_bases
TGGCGCTGGTCAGTCGGGCTGCTGCGATGTCGCCGACGGCTCGGGTCAGGGACTGCAGGTGCAGGCCGATCGCGAAGAGG
CGTTGGATGACCTGGTCGTG

Product: acyltransferase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTTTEEVKSSESMRSSTRQLDSLTGLRWVAALMVLVTHAAFQPGLLPYSGTTEDIKAVVKMGGYIGVGFFFVLSGFVLTW
SMRPDDTPRKFWRRRFFKIYPNHFVTFVLAVVMMVIHDRELVGIVPNLLLVQAWSTDLDVAFGINDVSWSLSAEMLFYRT
AGPRCSSAPPARPPARPTNRPTDTDGAEMLADSSHAARMSRSDLGESMHRRAMRDRAPSEGRVCPESTGWKGETEGVPGL
GHERDRALRRPCALVRTGGARTGGLGACWVPEVGLGSVRVSDGFGLGSIGLAVWGAGRRSCGGCRRWCGRGR

Sequences:

>Translated_312_residues
MTTTEEVKSSESMRSSTRQLDSLTGLRWVAALMVLVTHAAFQPGLLPYSGTTEDIKAVVKMGGYIGVGFFFVLSGFVLTW
SMRPDDTPRKFWRRRFFKIYPNHFVTFVLAVVMMVIHDRELVGIVPNLLLVQAWSTDLDVAFGINDVSWSLSAEMLFYRT
AGPRCSSAPPARPPARPTNRPTDTDGAEMLADSSHAARMSRSDLGESMHRRAMRDRAPSEGRVCPESTGWKGETEGVPGL
GHERDRALRRPCALVRTGGARTGGLGACWVPEVGLGSVRVSDGFGLGSIGLAVWGAGRRSCGGCRRWCGRGR
>Mature_311_residues
TTTEEVKSSESMRSSTRQLDSLTGLRWVAALMVLVTHAAFQPGLLPYSGTTEDIKAVVKMGGYIGVGFFFVLSGFVLTWS
MRPDDTPRKFWRRRFFKIYPNHFVTFVLAVVMMVIHDRELVGIVPNLLLVQAWSTDLDVAFGINDVSWSLSAEMLFYRTA
GPRCSSAPPARPPARPTNRPTDTDGAEMLADSSHAARMSRSDLGESMHRRAMRDRAPSEGRVCPESTGWKGETEGVPGLG
HERDRALRRPCALVRTGGARTGGLGACWVPEVGLGSVRVSDGFGLGSIGLAVWGAGRRSCGGCRRWCGRGR

Specific function: Catalyzes the acylation of the mycaminose sugar during midecamycin biosynthesis [H]

COG id: COG1835

COG function: function code I; Predicted acyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyltransferase 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002656 [H]

Pfam domain/function: PF01757 Acyl_transf_3 [H]

EC number: NA

Molecular weight: Translated: 34110; Mature: 33978

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTEEVKSSESMRSSTRQLDSLTGLRWVAALMVLVTHAAFQPGLLPYSGTTEDIKAVVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
MGGYIGVGFFFVLSGFVLTWSMRPDDTPRKFWRRRFFKIYPNHFVTFVLAVVMMVIHDRE
HCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCH
LVGIVPNLLLVQAWSTDLDVAFGINDVSWSLSAEMLFYRTAGPRCSSAPPARPPARPTNR
HHHHHHHHHHEECCCCCCEEEECCCCCCHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCC
PTDTDGAEMLADSSHAARMSRSDLGESMHRRAMRDRAPSEGRVCPESTGWKGETEGVPGL
CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GHERDRALRRPCALVRTGGARTGGLGACWVPEVGLGSVRVSDGFGLGSIGLAVWGAGRRS
CCHHHHHHHCCHHHHCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCHHHHHHCCCCCCC
CGGCRRWCGRGR
HHHHHHHHCCCC
>Mature Secondary Structure 
TTTEEVKSSESMRSSTRQLDSLTGLRWVAALMVLVTHAAFQPGLLPYSGTTEDIKAVVK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
MGGYIGVGFFFVLSGFVLTWSMRPDDTPRKFWRRRFFKIYPNHFVTFVLAVVMMVIHDRE
HCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCH
LVGIVPNLLLVQAWSTDLDVAFGINDVSWSLSAEMLFYRTAGPRCSSAPPARPPARPTNR
HHHHHHHHHHEECCCCCCEEEECCCCCCHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCC
PTDTDGAEMLADSSHAARMSRSDLGESMHRRAMRDRAPSEGRVCPESTGWKGETEGVPGL
CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GHERDRALRRPCALVRTGGARTGGLGACWVPEVGLGSVRVSDGFGLGSIGLAVWGAGRRS
CCHHHHHHHCCHHHHCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCHHHHHHCCCCCCC
CGGCRRWCGRGR
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1629172 [H]