| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963998
Identifier: 157963998
GI number: 157963998
Start: 5082393
End: 5083697
Strand: Reverse
Name: 157963998
Synonym: Spea_4187
Alternate gene names: NA
Gene position: 5083697-5082393 (Counterclockwise)
Preceding gene: 157963999
Following gene: 157963997
Centisome position: 98.24
GC content: 47.51
Gene sequence:
>1305_bases ATGAACAGAGCGTTTATCACCTCTGGAGCGTGGCTAAAGGGCAGCGTACGTCTGTGGTTGTTTGATTTAGGTTGTGTCAG TTTTCTCGGGGTGGGCTTGTTAGGGCTAATTATGGCCTTAGGCCTGCCTTTTTTGTTGGCCGATGACGCCGAGCGAGAAG TCGATACCCTGATCTTGCTGATGAACATGTTTGTCGCCTCCACTTGCATTGCTATTGCGTGGCAGATGAATCGTCTGGCA GCGACAGAGTGGGCAACGTTAGTCCCTCAGTATCGGCTGAGTGTGTTTTTGCAGTCCCTGGGCTTATTGTTGAGCAGCAT CATGATCGCGACAGGTTTTTTGTTGGCCCATGATGCGATAGATAAGGCTGATGAGGTGCTGCTGACTTTGCTATTTAGCT TTAGTTTTATCTATCTGAGCTTGATAAGCAGTCACGCTTTTTATCTATCATTTTTACTCTATGTTTCGCTACCTATGCAG CCTGTTTTAGTTGGTTTTTTACCTCAAGGTGGCAGTTTTATATTGCTGTTTACCGTCTTAGTGTTAGCGGTGTTCCTGTG GCAAAAACTGTCGCAGTTAACGTGGAACAGTAGGGCGCGCAGTGTTTATTTAAATGGACTCGAGGTGGGCTGGCTCTGGC TACCGTCACCACAATCATTTAAGTTATTAAACCGGCTCGAACGCAGCCTGCATCCGGCAAATTACTTTATTGGCCCTGTG TTTAGCGTCATGCTATTGGCGATGCCGTTGATCACCTTAGTGCTAGCCGTGATTGCCTATTATATGGCTGTGCAGTTACC TGTGTTGGTGCTGCTGGTGCAGTTTAATTGTATCTTATGTGGCATGTTGCACTGGAGCCGTATTCAGCGTTGGCGCGCAG TAGAAAGCCTGTTCATTCTTCCAGGGTTTGATGGCAAGCAGGGCATGATTAATGCCTTTATGAAGGCGCAATATCGGCTG TTATTCATATTGGTGGCCAGTATGGTGATCACCGCAAGCTTAGTGAGTCTGTTGAATCCCGTTATCAATGCCTCTATCTG GCTACATATCGTATTAACCACACTGTTTGGTTGTAGCTTGAGCTTAGGACTTGGCTCTATGTGCCGAAGTTCGTTGCAGA TCTCGGGTTTAATCTTCTTGGTTGGTTTGCTGTCGGGCTGGGTGTCGGTTGGGTTAGCGGATATTGAACGCGGTGAGCAA GTGTGGGGTTTAGTTCACTGGGATCTCGCCTTCGTTGTTTTCTCTCTATTTACATTATGGTTTGCTAAGCGGCGCTTATG GCGAGGCGATCTGCTGCGGTCATAG
Upstream 100 bases:
>100_bases AGGGTAATAAGGTGTTGGTGGACAACTATCGCCAGAGCTTTGATGGGCTTGTGGCGGCTGAGCCACTCAATTTAGAGCAG CTATTTATGGAGCTGCACAC
Downstream 100 bases:
>100_bases GACTAAAATTTAGATTCTTGAGGTAAAATAGACATAATGATTAAAAATTAATCTTTATTTTGTCTCGTTGTGCGCAGGAA ATACGTACAAGTGTTAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MNRAFITSGAWLKGSVRLWLFDLGCVSFLGVGLLGLIMALGLPFLLADDAEREVDTLILLMNMFVASTCIAIAWQMNRLA ATEWATLVPQYRLSVFLQSLGLLLSSIMIATGFLLAHDAIDKADEVLLTLLFSFSFIYLSLISSHAFYLSFLLYVSLPMQ PVLVGFLPQGGSFILLFTVLVLAVFLWQKLSQLTWNSRARSVYLNGLEVGWLWLPSPQSFKLLNRLERSLHPANYFIGPV FSVMLLAMPLITLVLAVIAYYMAVQLPVLVLLVQFNCILCGMLHWSRIQRWRAVESLFILPGFDGKQGMINAFMKAQYRL LFILVASMVITASLVSLLNPVINASIWLHIVLTTLFGCSLSLGLGSMCRSSLQISGLIFLVGLLSGWVSVGLADIERGEQ VWGLVHWDLAFVVFSLFTLWFAKRRLWRGDLLRS
Sequences:
>Translated_434_residues MNRAFITSGAWLKGSVRLWLFDLGCVSFLGVGLLGLIMALGLPFLLADDAEREVDTLILLMNMFVASTCIAIAWQMNRLA ATEWATLVPQYRLSVFLQSLGLLLSSIMIATGFLLAHDAIDKADEVLLTLLFSFSFIYLSLISSHAFYLSFLLYVSLPMQ PVLVGFLPQGGSFILLFTVLVLAVFLWQKLSQLTWNSRARSVYLNGLEVGWLWLPSPQSFKLLNRLERSLHPANYFIGPV FSVMLLAMPLITLVLAVIAYYMAVQLPVLVLLVQFNCILCGMLHWSRIQRWRAVESLFILPGFDGKQGMINAFMKAQYRL LFILVASMVITASLVSLLNPVINASIWLHIVLTTLFGCSLSLGLGSMCRSSLQISGLIFLVGLLSGWVSVGLADIERGEQ VWGLVHWDLAFVVFSLFTLWFAKRRLWRGDLLRS >Mature_434_residues MNRAFITSGAWLKGSVRLWLFDLGCVSFLGVGLLGLIMALGLPFLLADDAEREVDTLILLMNMFVASTCIAIAWQMNRLA ATEWATLVPQYRLSVFLQSLGLLLSSIMIATGFLLAHDAIDKADEVLLTLLFSFSFIYLSLISSHAFYLSFLLYVSLPMQ PVLVGFLPQGGSFILLFTVLVLAVFLWQKLSQLTWNSRARSVYLNGLEVGWLWLPSPQSFKLLNRLERSLHPANYFIGPV FSVMLLAMPLITLVLAVIAYYMAVQLPVLVLLVQFNCILCGMLHWSRIQRWRAVESLFILPGFDGKQGMINAFMKAQYRL LFILVASMVITASLVSLLNPVINASIWLHIVLTTLFGCSLSLGLGSMCRSSLQISGLIFLVGLLSGWVSVGLADIERGEQ VWGLVHWDLAFVVFSLFTLWFAKRRLWRGDLLRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48559; Mature: 48559
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRAFITSGAWLKGSVRLWLFDLGCVSFLGVGLLGLIMALGLPFLLADDAEREVDTLILL CCCEEECCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHH MNMFVASTCIAIAWQMNRLAATEWATLVPQYRLSVFLQSLGLLLSSIMIATGFLLAHDAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKADEVLLTLLFSFSFIYLSLISSHAFYLSFLLYVSLPMQPVLVGFLPQGGSFILLFTVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCCHHHHHHHH VLAVFLWQKLSQLTWNSRARSVYLNGLEVGWLWLPSPQSFKLLNRLERSLHPANYFIGPV HHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHH FSVMLLAMPLITLVLAVIAYYMAVQLPVLVLLVQFNCILCGMLHWSRIQRWRAVESLFIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE PGFDGKQGMINAFMKAQYRLLFILVASMVITASLVSLLNPVINASIWLHIVLTTLFGCSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLGLGSMCRSSLQISGLIFLVGLLSGWVSVGLADIERGEQVWGLVHWDLAFVVFSLFTLW HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH FAKRRLWRGDLLRS HHHHHHHHHHHCCC >Mature Secondary Structure MNRAFITSGAWLKGSVRLWLFDLGCVSFLGVGLLGLIMALGLPFLLADDAEREVDTLILL CCCEEECCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHH MNMFVASTCIAIAWQMNRLAATEWATLVPQYRLSVFLQSLGLLLSSIMIATGFLLAHDAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKADEVLLTLLFSFSFIYLSLISSHAFYLSFLLYVSLPMQPVLVGFLPQGGSFILLFTVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCCHHHHHHHH VLAVFLWQKLSQLTWNSRARSVYLNGLEVGWLWLPSPQSFKLLNRLERSLHPANYFIGPV HHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHH FSVMLLAMPLITLVLAVIAYYMAVQLPVLVLLVQFNCILCGMLHWSRIQRWRAVESLFIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE PGFDGKQGMINAFMKAQYRLLFILVASMVITASLVSLLNPVINASIWLHIVLTTLFGCSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLGLGSMCRSSLQISGLIFLVGLLSGWVSVGLADIERGEQVWGLVHWDLAFVVFSLFTLW HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH FAKRRLWRGDLLRS HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA