Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963973

Identifier: 157963973

GI number: 157963973

Start: 5053349

End: 5054011

Strand: Direct

Name: 157963973

Synonym: Spea_4162

Alternate gene names: NA

Gene position: 5053349-5054011 (Clockwise)

Preceding gene: 157963972

Following gene: 157963974

Centisome position: 97.66

GC content: 46.61

Gene sequence:

>663_bases
ATGTATAAAGCTCTGCGTACCTACACCTCGATTGCATTATTACTATTTTCTATACCGGCATTTTCCGAAGAGGTGGCGCG
AGTCACTCTAGAAAATGGTGCGACGGTCAAATTAAACGATGACTTCACTTGGGAATATGTGATTCTCGAGAGTCAAATCA
AACCTGATACCGCAGTGCCAGTTACCTTACCAGCTACAGTCGGCACGGTTGTGGCTGTAGAGAGCGCAGCTCCAGCAATA
TCCGAAGCACCAACAACAGCAGTGCCGTCGACATTGCCAGCAAAAACAGAAACGTTAACCTCTTCAGCGATAGCCCAATC
GGCACTACTAAAATCAACCGCTAAAGGCGGCGTCAAAGTCAGCTTTCTTGATAGCCAATGGGATGATGATGGCCGTTTAG
GGCTCACCTTCGAGCTTAATAGCAACAGCCCCGAGCACTACGTAATGATAGAGCTAGAAGTCAGCCTATTTGCCGACTCT
GGTGCATTAATAAAGAAAGAGACGGTTAAAGTTTGGCAAGCGGTATTTAGAATGCCTGACACTTACCTACGCAAAGGTCA
GACTCGTGACAGTCGCGTATTCTGGATTGAGGACTTAGATCCTAAGCTATGGACTAAAGAGTTGATGAGCCTGAAAATCG
GTGAGATGGACTCACGCATGTAA

Upstream 100 bases:

>100_bases
GTGATCCTGCGATAACACCGCCTTATTCTGACTAACGCCTGTATTAATCCCGCACGACTTTGTCTATGCTAGGGCAATCA
ACTTAAACAGGTTATTTCCC

Downstream 100 bases:

>100_bases
CCTCAACAATAGTCGTTAACCAAGCCGTAAGGGCTCAACCCTTACGGCTTTTTTCGTTTAAATGGGCCGTAGAAAGCAGA
TAGCGCTCTAAACTTTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MYKALRTYTSIALLLFSIPAFSEEVARVTLENGATVKLNDDFTWEYVILESQIKPDTAVPVTLPATVGTVVAVESAAPAI
SEAPTTAVPSTLPAKTETLTSSAIAQSALLKSTAKGGVKVSFLDSQWDDDGRLGLTFELNSNSPEHYVMIELEVSLFADS
GALIKKETVKVWQAVFRMPDTYLRKGQTRDSRVFWIEDLDPKLWTKELMSLKIGEMDSRM

Sequences:

>Translated_220_residues
MYKALRTYTSIALLLFSIPAFSEEVARVTLENGATVKLNDDFTWEYVILESQIKPDTAVPVTLPATVGTVVAVESAAPAI
SEAPTTAVPSTLPAKTETLTSSAIAQSALLKSTAKGGVKVSFLDSQWDDDGRLGLTFELNSNSPEHYVMIELEVSLFADS
GALIKKETVKVWQAVFRMPDTYLRKGQTRDSRVFWIEDLDPKLWTKELMSLKIGEMDSRM
>Mature_220_residues
MYKALRTYTSIALLLFSIPAFSEEVARVTLENGATVKLNDDFTWEYVILESQIKPDTAVPVTLPATVGTVVAVESAAPAI
SEAPTTAVPSTLPAKTETLTSSAIAQSALLKSTAKGGVKVSFLDSQWDDDGRLGLTFELNSNSPEHYVMIELEVSLFADS
GALIKKETVKVWQAVFRMPDTYLRKGQTRDSRVFWIEDLDPKLWTKELMSLKIGEMDSRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24240; Mature: 24240

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKALRTYTSIALLLFSIPAFSEEVARVTLENGATVKLNDDFTWEYVILESQIKPDTAVP
CCHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCEEEECCCCEEEEEEEECCCCCCCCCE
VTLPATVGTVVAVESAAPAISEAPTTAVPSTLPAKTETLTSSAIAQSALLKSTAKGGVKV
EEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
SFLDSQWDDDGRLGLTFELNSNSPEHYVMIELEVSLFADSGALIKKETVKVWQAVFRMPD
EEECCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEEEECCCCEEHHHHHHHHHHHHHCCH
TYLRKGQTRDSRVFWIEDLDPKLWTKELMSLKIGEMDSRM
HHHHCCCCCCCEEEEEECCCHHHHHHHHHHEECCCCCCCC
>Mature Secondary Structure
MYKALRTYTSIALLLFSIPAFSEEVARVTLENGATVKLNDDFTWEYVILESQIKPDTAVP
CCHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCEEEECCCCEEEEEEEECCCCCCCCCE
VTLPATVGTVVAVESAAPAISEAPTTAVPSTLPAKTETLTSSAIAQSALLKSTAKGGVKV
EEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
SFLDSQWDDDGRLGLTFELNSNSPEHYVMIELEVSLFADSGALIKKETVKVWQAVFRMPD
EEECCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEEEECCCCEEHHHHHHHHHHHHHCCH
TYLRKGQTRDSRVFWIEDLDPKLWTKELMSLKIGEMDSRM
HHHHCCCCCCCEEEEEECCCHHHHHHHHHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA