| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963972
Identifier: 157963972
GI number: 157963972
Start: 5052776
End: 5053171
Strand: Direct
Name: 157963972
Synonym: Spea_4161
Alternate gene names: NA
Gene position: 5052776-5053171 (Clockwise)
Preceding gene: 157963971
Following gene: 157963973
Centisome position: 97.65
GC content: 41.41
Gene sequence:
>396_bases ATGACAAGCTTAACCAGTCAAAGCAACAAAATTACCCTGATCAAATCAGGCTCATTCGCACTTAATGATTTAAGCCAGTT ATTAAATATCGAAAACCTAAAGAGTGATATGGCTGAAGTAAGTGTCACTAACAACAGCAACGCCCTCACTATTGGCCACT TTACTATGGCGCCAGGTACTGAATTTGAGTACTTCTATGATTCTGTTGAATATAAGGTGATCACCAAGGGAAAAATCATC GTACGTGATACCGACAACGTGAAATACGTTGCAGAAGTCGGTGACGTATTACTTTTCTCTCCTGATGTAACCGTCATTTT TGATGCAGAGAGTGATGGCGAAGCCATCTACACAGCTCATCGCCTAGCTGCAGCTGATTTTGCCCCAAAAGCTTAA
Upstream 100 bases:
>100_bases GAAATCATCACTATCTTCAGAGCGCGTTTGTAATTCAGTCTTAAATCCATCAAATAAGGGGGGGATAAGCTTCCCCCTCA TTCATTATTCTAGGATCCCC
Downstream 100 bases:
>100_bases CCACTGACTTTATACACCAACCCGACTTTTATCTTCGGGTTGGTGTTTTACGACCAATAAACCAAACTTCTCCCTCTGTG ATCCTGCGATAACACCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTSLTSQSNKITLIKSGSFALNDLSQLLNIENLKSDMAEVSVTNNSNALTIGHFTMAPGTEFEYFYDSVEYKVITKGKII VRDTDNVKYVAEVGDVLLFSPDVTVIFDAESDGEAIYTAHRLAAADFAPKA
Sequences:
>Translated_131_residues MTSLTSQSNKITLIKSGSFALNDLSQLLNIENLKSDMAEVSVTNNSNALTIGHFTMAPGTEFEYFYDSVEYKVITKGKII VRDTDNVKYVAEVGDVLLFSPDVTVIFDAESDGEAIYTAHRLAAADFAPKA >Mature_130_residues TSLTSQSNKITLIKSGSFALNDLSQLLNIENLKSDMAEVSVTNNSNALTIGHFTMAPGTEFEYFYDSVEYKVITKGKIIV RDTDNVKYVAEVGDVLLFSPDVTVIFDAESDGEAIYTAHRLAAADFAPKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14291; Mature: 14160
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLTSQSNKITLIKSGSFALNDLSQLLNIENLKSDMAEVSVTNNSNALTIGHFTMAPGT CCCCCCCCCEEEEEECCCCCHHHHHHHHCHHHHCCCCEEEEEECCCCEEEEEEEEECCCC EFEYFYDSVEYKVITKGKIIVRDTDNVKYVAEVGDVLLFSPDVTVIFDAESDGEAIYTAH CCEEEECCEEEEEEECCEEEEEECCCEEEEEECCCEEEECCCEEEEEECCCCCCEEEEEE RLAAADFAPKA HHHHCCCCCCC >Mature Secondary Structure TSLTSQSNKITLIKSGSFALNDLSQLLNIENLKSDMAEVSVTNNSNALTIGHFTMAPGT CCCCCCCCEEEEEECCCCCHHHHHHHHCHHHHCCCCEEEEEECCCCEEEEEEEEECCCC EFEYFYDSVEYKVITKGKIIVRDTDNVKYVAEVGDVLLFSPDVTVIFDAESDGEAIYTAH CCEEEECCEEEEEEECCEEEEEECCCEEEEEECCCEEEECCCEEEEEECCCCCCEEEEEE RLAAADFAPKA HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA