Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963966

Identifier: 157963966

GI number: 157963966

Start: 5047314

End: 5047736

Strand: Reverse

Name: 157963966

Synonym: Spea_4155

Alternate gene names: NA

Gene position: 5047736-5047314 (Counterclockwise)

Preceding gene: 157963969

Following gene: 157963963

Centisome position: 97.55

GC content: 45.63

Gene sequence:

>423_bases
ATGTTTAAAAAAGTAATCAGTGTCTTATTGTTGTGCTTGGCATTTAACGTTCATGCCGTGCCAACCGATGATATTGCAAA
TATTTTGGCCGAGCAGGAAGCTGCATGGAATCGCGGTGACCTAGATGCTTATATGCAGGGCTATTGGAACAGTGACAAAA
TGCGCTTCGTTTCCAATGGTAAATTCCGTTATGGCTGGGCAGAAACACTTGCCGCCTATAAGAAACATTATCCCGATAAA
GCGACCTTAGGCTCGCTGACTTTTACGATTAAAGAGATCAAGATGCTCAGCAACTATGCGGCTATAGTTGTCGGCCGTTG
GTCACTGGATCGCGCTAAAGACAACCCTAATGGCGTGTTCACGCTCTTGGTCGAGAAAATCGATGACCGTTGGGTGATCA
CTCATGACCACACCTCTGATTAG

Upstream 100 bases:

>100_bases
TGTTGCTTTCAGGGGCTTTAGCCAATAGGTATTGGTTGTAATACCCCGGATAGATATTTGAGGTATAGTACACCCAATAG
AGCCAGATTGGAGAGAGGCA

Downstream 100 bases:

>100_bases
TGAAGCATCTGCTTCTTAAATAGCTCTGCTATCTTTGCAATAGTAAGTTGCAATATTGGCGCATTTGGCTCTGTTTTGAT
AAACAGAGCTAAGTTAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MFKKVISVLLLCLAFNVHAVPTDDIANILAEQEAAWNRGDLDAYMQGYWNSDKMRFVSNGKFRYGWAETLAAYKKHYPDK
ATLGSLTFTIKEIKMLSNYAAIVVGRWSLDRAKDNPNGVFTLLVEKIDDRWVITHDHTSD

Sequences:

>Translated_140_residues
MFKKVISVLLLCLAFNVHAVPTDDIANILAEQEAAWNRGDLDAYMQGYWNSDKMRFVSNGKFRYGWAETLAAYKKHYPDK
ATLGSLTFTIKEIKMLSNYAAIVVGRWSLDRAKDNPNGVFTLLVEKIDDRWVITHDHTSD
>Mature_140_residues
MFKKVISVLLLCLAFNVHAVPTDDIANILAEQEAAWNRGDLDAYMQGYWNSDKMRFVSNGKFRYGWAETLAAYKKHYPDK
ATLGSLTFTIKEIKMLSNYAAIVVGRWSLDRAKDNPNGVFTLLVEKIDDRWVITHDHTSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16002; Mature: 16002

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKVISVLLLCLAFNVHAVPTDDIANILAEQEAAWNRGDLDAYMQGYWNSDKMRFVSNG
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECC
KFRYGWAETLAAYKKHYPDKATLGSLTFTIKEIKMLSNYAAIVVGRWSLDRAKDNPNGVF
CEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEE
TLLVEKIDDRWVITHDHTSD
EEEEECCCCCEEEECCCCCC
>Mature Secondary Structure
MFKKVISVLLLCLAFNVHAVPTDDIANILAEQEAAWNRGDLDAYMQGYWNSDKMRFVSNG
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECC
KFRYGWAETLAAYKKHYPDKATLGSLTFTIKEIKMLSNYAAIVVGRWSLDRAKDNPNGVF
CEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEE
TLLVEKIDDRWVITHDHTSD
EEEEECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA