| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963896
Identifier: 157963896
GI number: 157963896
Start: 4966547
End: 4967083
Strand: Reverse
Name: 157963896
Synonym: Spea_4085
Alternate gene names: NA
Gene position: 4967083-4966547 (Counterclockwise)
Preceding gene: 157963897
Following gene: 157963895
Centisome position: 95.99
GC content: 45.25
Gene sequence:
>537_bases ATGAAGTCTCAATTCGATCTGCAAGACGCCTTATTTATCGGTTTTTGTGCCACCTTGTTGGTGGTTTTAAAAAGCATGTT GCGACTCAAGCTTGGCTTAAGTGGCCACTCAATGTTTTTGATGACCTTTTTCTACCTTATTTGCTACGGCGTAGTTAATC GCGTTGGCGCTATGACAGCATGTGGTTTATTAGCTGGGCTAGTGGCCATGATGCTGAGTGTTGGTAAAGGGGGCCCAATG ATCTTGCTTAAGTTTGGTTTGCCAGCAATGGCAATGGACTTGGCGTTACTGTTTATGGCTGGGGCATTTAGTTTGCGTTG GCAGAGCATAGTATTGGCGATAATTGGTTGTTTGGCGTGGTCAGGCAAAGGTTTGATAAGCAACTTATTAGTAGGAATGA GTGGTCAAGTTGCACTGGCTGAATTTGGCCTTAGCTTTATTCAAGGTGGCATGTTTGCTGTGGCCGCTGCGCTATTAATT CCAACGGTTCTAAGCCGTTTGCACGCACACGATTTATTGCCGAAAAGGCCTGAGTAA
Upstream 100 bases:
>100_bases AGCTACTTAAATTATCAAAACAGATGGCGAAAGCCGCCAAACTGCGTCATTTCGGCAAAGTAAATAAGCCAACCCATTGG CCTGCAAAAAGAGAGGAAGA
Downstream 100 bases:
>100_bases CGACGTAAAAGATAAGCATAGCTATTTTACGCGGTTAAGAACTCATTCGACGTAGAAACATAACATTAATAATAAGGGTT TTAGATGAAAGCTTGGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKSQFDLQDALFIGFCATLLVVLKSMLRLKLGLSGHSMFLMTFFYLICYGVVNRVGAMTACGLLAGLVAMMLSVGKGGPM ILLKFGLPAMAMDLALLFMAGAFSLRWQSIVLAIIGCLAWSGKGLISNLLVGMSGQVALAEFGLSFIQGGMFAVAAALLI PTVLSRLHAHDLLPKRPE
Sequences:
>Translated_178_residues MKSQFDLQDALFIGFCATLLVVLKSMLRLKLGLSGHSMFLMTFFYLICYGVVNRVGAMTACGLLAGLVAMMLSVGKGGPM ILLKFGLPAMAMDLALLFMAGAFSLRWQSIVLAIIGCLAWSGKGLISNLLVGMSGQVALAEFGLSFIQGGMFAVAAALLI PTVLSRLHAHDLLPKRPE >Mature_178_residues MKSQFDLQDALFIGFCATLLVVLKSMLRLKLGLSGHSMFLMTFFYLICYGVVNRVGAMTACGLLAGLVAMMLSVGKGGPM ILLKFGLPAMAMDLALLFMAGAFSLRWQSIVLAIIGCLAWSGKGLISNLLVGMSGQVALAEFGLSFIQGGMFAVAAALLI PTVLSRLHAHDLLPKRPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18945; Mature: 18945
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSQFDLQDALFIGFCATLLVVLKSMLRLKLGLSGHSMFLMTFFYLICYGVVNRVGAMTA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CGLLAGLVAMMLSVGKGGPMILLKFGLPAMAMDLALLFMAGAFSLRWQSIVLAIIGCLAW HHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGKGLISNLLVGMSGQVALAEFGLSFIQGGMFAVAAALLIPTVLSRLHAHDLLPKRPE CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKSQFDLQDALFIGFCATLLVVLKSMLRLKLGLSGHSMFLMTFFYLICYGVVNRVGAMTA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CGLLAGLVAMMLSVGKGGPMILLKFGLPAMAMDLALLFMAGAFSLRWQSIVLAIIGCLAW HHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGKGLISNLLVGMSGQVALAEFGLSFIQGGMFAVAAALLIPTVLSRLHAHDLLPKRPE CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA