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The map label for this gene is perR [H]

Identifier: 157963841

GI number: 157963841

Start: 4894801

End: 4895691

Strand: Reverse

Name: perR [H]

Synonym: Spea_4030

Alternate gene names: 157963841

Gene position: 4895691-4894801 (Counterclockwise)

Preceding gene: 157963842

Following gene: 157963836

Centisome position: 94.61

GC content: 46.35

Gene sequence:

>891_bases
ATGAATAATAACATTCCGTTAAGGGCGTTACAGGTTTTTGAATCATGCGCGAGGTTGGAAAGCTGTTCGCTTGCTGCGAA
TGAGTTGTGCATCACCCAGAGCGCTGTCTCACAACAGATAAAGCTGCTTGAAGATTACTTCTTAGAAAAGCTATTTCACC
GCAACGCGGGAAAGATCACCCTTACCGAATCAGGACTTGAGCTTAGGCAGAGGTTGGCACCTGTTTTCTATGATTTAAAT
AGTGTCTGCGCAAGCTTAGTGCCGGATATGTCTAACGAGGTTAGGGTTCACTCCTATAACTCTTTAGCCGCTCGCTGGCT
GGTGCCTAAAATGGCAAAGCTAAGAGCGGAGCACCCAGAGTTCAATATTAATGTAGGCATGTTCCAAGATGATGTCGAGA
TGAGCGATATGCTCGCCGACATCTTTATTATTACTCGTGAATGCCAAGATGGTTATACCATCATCCCATTAGTGGAAGAG
AAGCTGGTGGCATACTGTAGCCCCAAGTATTTGGAGAAACATCCTAATATCTCTTCAGAAACCTTCCATGAGCAGACGCT
GCTTTACTCGAAGCACAAAGACTATGGTGTCGATTGGGAAGGCTGGTTCAGGTTTAACAAGGTGGCTGTGGGCCCCTTGC
AGCGGAAAATCGTATTCAACCACAATATGCTTGCGGTTCAGGCGGCCATTTTTGGGCAAGGCATCGTTTTGGGTCTAGAG
CAGACCCTGCAGATTGAAGTCGACTCAGGAAATCTCGTTAAGCTGGAGCTCCCCCATTGTTTTACAGGTTGGACCTACTC
CATCGCTTTTAAGTCTTCAAGAAAACGGGATGCCCGCATAACCAAGATTGTCGATTGGATAATTGCAGAATATGCGAGCA
GCGTATCTTAG

Upstream 100 bases:

>100_bases
ACTCAAATTAATTCGTATCTTATTGTGGCCATAGTTACATTTTTATTCTAAATCCTTATGCTAGTCTCGAGTCTCAGGCA
CTTAAATCATGTACTAAAAT

Downstream 100 bases:

>100_bases
TCGGGACTCTTCTCTATCTGCTTAAACTGCTTACGGCATTATTCAATAAGCTGAGGAAGAAGGCTTGCTGGATATTGGCT
TAAGAGGGTTAAAGAAGGGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Peroxide resistance protein perR [H]

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNNNIPLRALQVFESCARLESCSLAANELCITQSAVSQQIKLLEDYFLEKLFHRNAGKITLTESGLELRQRLAPVFYDLN
SVCASLVPDMSNEVRVHSYNSLAARWLVPKMAKLRAEHPEFNINVGMFQDDVEMSDMLADIFIITRECQDGYTIIPLVEE
KLVAYCSPKYLEKHPNISSETFHEQTLLYSKHKDYGVDWEGWFRFNKVAVGPLQRKIVFNHNMLAVQAAIFGQGIVLGLE
QTLQIEVDSGNLVKLELPHCFTGWTYSIAFKSSRKRDARITKIVDWIIAEYASSVS

Sequences:

>Translated_296_residues
MNNNIPLRALQVFESCARLESCSLAANELCITQSAVSQQIKLLEDYFLEKLFHRNAGKITLTESGLELRQRLAPVFYDLN
SVCASLVPDMSNEVRVHSYNSLAARWLVPKMAKLRAEHPEFNINVGMFQDDVEMSDMLADIFIITRECQDGYTIIPLVEE
KLVAYCSPKYLEKHPNISSETFHEQTLLYSKHKDYGVDWEGWFRFNKVAVGPLQRKIVFNHNMLAVQAAIFGQGIVLGLE
QTLQIEVDSGNLVKLELPHCFTGWTYSIAFKSSRKRDARITKIVDWIIAEYASSVS
>Mature_296_residues
MNNNIPLRALQVFESCARLESCSLAANELCITQSAVSQQIKLLEDYFLEKLFHRNAGKITLTESGLELRQRLAPVFYDLN
SVCASLVPDMSNEVRVHSYNSLAARWLVPKMAKLRAEHPEFNINVGMFQDDVEMSDMLADIFIITRECQDGYTIIPLVEE
KLVAYCSPKYLEKHPNISSETFHEQTLLYSKHKDYGVDWEGWFRFNKVAVGPLQRKIVFNHNMLAVQAAIFGQGIVLGLE
QTLQIEVDSGNLVKLELPHCFTGWTYSIAFKSSRKRDARITKIVDWIIAEYASSVS

Specific function: Apparent regulatory gene involved in peroxide resistance in stationary phase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786448, Length=249, Percent_Identity=31.3253012048193, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1789173, Length=295, Percent_Identity=30.1694915254237, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI1788706, Length=258, Percent_Identity=29.0697674418605, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI145693193, Length=297, Percent_Identity=21.8855218855219, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789440, Length=267, Percent_Identity=26.2172284644195, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33730; Mature: 33730

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNIPLRALQVFESCARLESCSLAANELCITQSAVSQQIKLLEDYFLEKLFHRNAGKIT
CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LTESGLELRQRLAPVFYDLNSVCASLVPDMSNEVRVHSYNSLAARWLVPKMAKLRAEHPE
EECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCC
FNINVGMFQDDVEMSDMLADIFIITRECQDGYTIIPLVEEKLVAYCSPKYLEKHPNISSE
EEEEECCEECCHHHHHHHHHHHHEEEECCCCCEEEEEHHHHHHHHCCHHHHHHCCCCCCH
TFHEQTLLYSKHKDYGVDWEGWFRFNKVAVGPLQRKIVFNHNMLAVQAAIFGQGIVLGLE
HHHHHHHHHHCCCCCCCCHHHHEEECEEEECCHHEEEEECCCHHEEHHHHHCCCEEEEEC
QTLQIEVDSGNLVKLELPHCFTGWTYSIAFKSSRKRDARITKIVDWIIAEYASSVS
EEEEEEECCCCEEEEECCCEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNNIPLRALQVFESCARLESCSLAANELCITQSAVSQQIKLLEDYFLEKLFHRNAGKIT
CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LTESGLELRQRLAPVFYDLNSVCASLVPDMSNEVRVHSYNSLAARWLVPKMAKLRAEHPE
EECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCC
FNINVGMFQDDVEMSDMLADIFIITRECQDGYTIIPLVEEKLVAYCSPKYLEKHPNISSE
EEEEECCEECCHHHHHHHHHHHHEEEECCCCCEEEEEHHHHHHHHCCHHHHHHCCCCCCH
TFHEQTLLYSKHKDYGVDWEGWFRFNKVAVGPLQRKIVFNHNMLAVQAAIFGQGIVLGLE
HHHHHHHHHHCCCCCCCCHHHHEEECEEEECCHHEEEEECCCHHEEHHHHHCCCEEEEEC
QTLQIEVDSGNLVKLELPHCFTGWTYSIAFKSSRKRDARITKIVDWIIAEYASSVS
EEEEEEECCCCEEEEECCCEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]