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The map label for this gene is nahR [H]

Identifier: 157963831

GI number: 157963831

Start: 4884012

End: 4884986

Strand: Reverse

Name: nahR [H]

Synonym: Spea_4020

Alternate gene names: 157963831

Gene position: 4884986-4884012 (Counterclockwise)

Preceding gene: 157963832

Following gene: 157963827

Centisome position: 94.4

GC content: 43.79

Gene sequence:

>975_bases
ATGAACACCAATGAGAGTGCTAAAGATCTTTCTGTTGCTCACCTTCAGCTAATCGTCTGTCTTATCAAGCATGGAAACGC
TTGCGTAGCATCGGATGAGCTTGGTATGAGTCAATCGACGATCAGTTACCATCTGCGTCGCGTGCGAAGCATATTTTCTG
ATGAGATGTTTGTAAGAACGGGGAAAGGGCTTAAGCCTACGGAGCGATGTCTTCAAGTCGGTCATTTTGCTCAAGACTTA
ATTAATCGTGTTGAAGAGGAGTTGATCCACGGCAATGATTTTGAGGCAACTCATATTGAGCGGGAGCTTAGTTTAATTGC
TGATGATACTGCCTGTGGTTGGTTTGGGGAGTTATTTGTTGATCTGCAGAAAGCTTTGCCTAAGGTAAACCTGTGTGCTC
GTCCTTGGTACCTTAATGCACTGAAAGATTTAGACAGTGGCGCCGTACACTTTGGTCTGCACATAATGCAAAGCGGCATC
AAAGGAATTTATGATCTCGAGGTTGTCCCCTGCTATCGTCTATGTGTGGTACGTGACGGCCACCCTCTGGTGTCACAAGG
AGAGGTAACTCTTGAAGATCTGGCAATGTATCCGGTAATTTTAAATGACTTGGCTGGATGGAATAATAATGGTCACTCAG
TTATGGAAACCGTGCTTAAAAACCATGGGCTTAAAGCGAATCTTGTCGGGCGATTAGGCTATGTGAATAGTATTTTCAGT
GCGTTACAGGGCAGTAATGCGATTACCTATACTTCAGCAGTGTCTCTACCTAAGGATCTCTCTGGATTGACTTTGCTCAA
GGCGCCGCCTGCGCTTGATGAAGTTGAATGTAACTATCGCCTTTATATTAGTAAGACACGCTATGGTTCGCAGGAAACTA
ATTACTTAATAGAGTTTCTTTATAATTCTTTTAAGAGTTTTGCGCTGGGTAAGTATGAAAGACCCGAAGTCGCGCCCCTA
ATTAGAAAGTGTTGA

Upstream 100 bases:

>100_bases
ATATGTGAACACCTTATGAGATAACGTATTGGGTGCTACTTTGCTTATATTCTTACGGTTAATATCTAACCATACCTGCT
AAAGATCCCAAGGAAGTATG

Downstream 100 bases:

>100_bases
GGCTTTAGATTTTGAGAGGCTTATAAGTTGCCGGCACTATATTATTGCGTCACTTATGATTCATTGAAGGCAGTAAAGCC
CACTACCGTTGCCTAAACAA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MNTNESAKDLSVAHLQLIVCLIKHGNACVASDELGMSQSTISYHLRRVRSIFSDEMFVRTGKGLKPTERCLQVGHFAQDL
INRVEEELIHGNDFEATHIERELSLIADDTACGWFGELFVDLQKALPKVNLCARPWYLNALKDLDSGAVHFGLHIMQSGI
KGIYDLEVVPCYRLCVVRDGHPLVSQGEVTLEDLAMYPVILNDLAGWNNNGHSVMETVLKNHGLKANLVGRLGYVNSIFS
ALQGSNAITYTSAVSLPKDLSGLTLLKAPPALDEVECNYRLYISKTRYGSQETNYLIEFLYNSFKSFALGKYERPEVAPL
IRKC

Sequences:

>Translated_324_residues
MNTNESAKDLSVAHLQLIVCLIKHGNACVASDELGMSQSTISYHLRRVRSIFSDEMFVRTGKGLKPTERCLQVGHFAQDL
INRVEEELIHGNDFEATHIERELSLIADDTACGWFGELFVDLQKALPKVNLCARPWYLNALKDLDSGAVHFGLHIMQSGI
KGIYDLEVVPCYRLCVVRDGHPLVSQGEVTLEDLAMYPVILNDLAGWNNNGHSVMETVLKNHGLKANLVGRLGYVNSIFS
ALQGSNAITYTSAVSLPKDLSGLTLLKAPPALDEVECNYRLYISKTRYGSQETNYLIEFLYNSFKSFALGKYERPEVAPL
IRKC
>Mature_324_residues
MNTNESAKDLSVAHLQLIVCLIKHGNACVASDELGMSQSTISYHLRRVRSIFSDEMFVRTGKGLKPTERCLQVGHFAQDL
INRVEEELIHGNDFEATHIERELSLIADDTACGWFGELFVDLQKALPKVNLCARPWYLNALKDLDSGAVHFGLHIMQSGI
KGIYDLEVVPCYRLCVVRDGHPLVSQGEVTLEDLAMYPVILNDLAGWNNNGHSVMETVLKNHGLKANLVGRLGYVNSIFS
ALQGSNAITYTSAVSLPKDLSGLTLLKAPPALDEVECNYRLYISKTRYGSQETNYLIEFLYNSFKSFALGKYERPEVAPL
IRKC

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 36125; Mature: 36125

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNESAKDLSVAHLQLIVCLIKHGNACVASDELGMSQSTISYHLRRVRSIFSDEMFVRT
CCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEC
GKGLKPTERCLQVGHFAQDLINRVEEELIHGNDFEATHIERELSLIADDTACGWFGELFV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
DLQKALPKVNLCARPWYLNALKDLDSGAVHFGLHIMQSGIKGIYDLEVVPCYRLCVVRDG
HHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECEEEEEEEECC
HPLVSQGEVTLEDLAMYPVILNDLAGWNNNGHSVMETVLKNHGLKANLVGRLGYVNSIFS
CCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHH
ALQGSNAITYTSAVSLPKDLSGLTLLKAPPALDEVECNYRLYISKTRYGSQETNYLIEFL
HHCCCCCEEEEHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH
YNSFKSFALGKYERPEVAPLIRKC
HHHHHHHHCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MNTNESAKDLSVAHLQLIVCLIKHGNACVASDELGMSQSTISYHLRRVRSIFSDEMFVRT
CCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEC
GKGLKPTERCLQVGHFAQDLINRVEEELIHGNDFEATHIERELSLIADDTACGWFGELFV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
DLQKALPKVNLCARPWYLNALKDLDSGAVHFGLHIMQSGIKGIYDLEVVPCYRLCVVRDG
HHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECEEEEEEEECC
HPLVSQGEVTLEDLAMYPVILNDLAGWNNNGHSVMETVLKNHGLKANLVGRLGYVNSIFS
CCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHH
ALQGSNAITYTSAVSLPKDLSGLTLLKAPPALDEVECNYRLYISKTRYGSQETNYLIEFL
HHCCCCCEEEEHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH
YNSFKSFALGKYERPEVAPLIRKC
HHHHHHHHCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]